Hippoglossus stenolepis (Pacific halibut): 118122689
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Entry
118122689 CDS
T08308
Name
(RefSeq) short transient receptor potential channel 4
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hsp04040
]
118122689
Ion channels [BR:
hsp04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
118122689
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
Ank_3
PKD_channel
Ank_5
YVC1_C
Motif
Other DBs
NCBI-GeneID:
118122689
NCBI-ProteinID:
XP_035035465
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Position
15:complement(19341770..19369910)
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AA seq
949 aa
AA seq
DB search
MSQLYYRRTDSSSYRDRIPLRIVRAESELSPLEKAYLGAVEKGDYASVKHALEEAEIYFK
ININCIDPLGRTALLIAIENENLEIIELLLSFSVYVGDALLHAIRKEVVGAVELLLNHKK
PSGGMQVPPILLDKQFSDFTPDITPIILAAHTNNYEIIKLLVQKGVSMPQPHEVRCNCVE
CVSSSDVDSLRHSRSRLNIYRALSSPSLIALSSEDPFLTAFRLSWELQELSKVENEFKSE
YEELSQQCKQFAKDLLDQTRSSRELEMILNYRDDINLLEEENNNDLARLKLAIKYHQKEF
VAQPNCQQLLASRWYDEFPGWRRRQWAGKFFTCVFIGLLYPGFALCYLIAPKSRYGLFIR
KPFIKFICHTASYLTFLFLLLLASQHIVTTEQDRQDRQGPAPTTVEWMILPWVLGFIWAE
IKQMWDGGFQDYVHDWWNLMDFVMNSLYLATISLKIVAYTKYSGSKPRNQWEMWHPTLVA
EAVFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQL
YFYYETKASDEKGKCKGIRCVEQNNAFSTLFETLQSLFWSIFGLISLYVTNVDADHQFTE
FVGATMFGTYNIISLVVLLNMLIAMMNNSYQHIADHADIEWKFARTKLWMSYFEEGATLP
APFNIIPSPKSFLYLICWIKRQVCKRTNSKRPDTFGSLGRRAAENLRINHQYQEVLRNLV
KRYVAAMIRDAKTEEGLTEENFKELKQDISSFRYEVMGMMKTGKPALQGAKASGSSVESS
LAYPNSSLKVSPGPQSSQAKSKSNRFKITASILKMGSSTASPRPPEVFNGLPNGLLPLEP
DESPGDKSGQRRNFPKDITDFGLFQKRHRNEATSGAEETSRKMYSLSEEAGESGGSDAEE
RDKERTAGGEEETKLSGGEMAEEAAVTAADIEDGEVSNTKYGSEEDKEK
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagctctactatcggcggactgacagctcctcgtaccgggaccgcatcccgctg
aggatcgtgcgggccgagtcggagctgtcgcctctggagaaagcctacctcggagctgtg
gagaagggcgactatgcgagtgtcaaacacgctctggaggaggcagagatctactttaag
atcaacatcaactgcatcgaccctctcggccgcacggctctgctgatcgccatcgagaac
gagaacctcgagatcatcgagctcttgctgagcttcagcgtctacgtcggcgatgccctg
ctgcacgccatccgcaaggaagtggtgggagctgtggagctgctgctaaatcacaagaag
cccagtggcggcatgcaggttcctcccatcttattggacaagcagttctccgacttcacc
cccgacatcactcccatcatacttgcggcgcacaccaacaactatgaaattatcaagctc
ctggtgcagaaaggcgtttcaatgccgcagccgcatgaggtgcgctgcaactgcgtggag
tgcgtgtccagctcggacgtggacagcttgcgtcactcgcgctctcggctcaacatctac
agggcgctgtcgagtccctccctgatcgctctctccagcgaggaccccttcctcactgcg
ttcaggctcagctgggagctgcaggagctcagcaaggtggagaatgagttcaaatccgag
tacgaggagctgtcccagcagtgcaaacagtttgccaaggacctgctggaccagaccagg
agctccagggagctggagatgatcctcaactacagagacgacatcaacctgttggaggag
gagaacaacaacgacctggcgagactcaaactagctatcaagtatcatcaaaaagagttt
gtagctcagccaaactgccagcagctgttggcgtcgcgctggtacgacgagttccccggc
tggaggcggcgacagtgggctgggaagttcttcacctgcgtcttcatcggcctcctctac
cccgggttcgcgctctgctacctcatcgctccgaagagtcgctacggcctcttcatccgc
aagcccttcatcaagttcatctgccacacggcgtcctacctgaccttcctcttcctgctg
ctcctcgcctcccagcacatcgtcaccacagagcaggacaggcaggacaggcagggcccg
gcacccaccaccgtggagtggatgatcctgccctgggtgctgggattcatctgggccgag
atcaagcaaatgtgggatggtggtttccaagactatgtccacgactggtggaacctgatg
gactttgtcatgaactctctatacctggccaccatctccctcaagattgtagcctacact
aagtacagcggcagtaaacccaggaaccagtgggagatgtggcacccgacgcttgtagct
gaggcggtgtttgccatcgctaacatcttcagctccctgcgcctgatctcgctgttcaca
gccaactctcatctggggccgctgcagatctctctggggagaatgctactggacatcctg
aagttcctcttcatctactgtctggtcctgctggcctttgctaacgggctgaaccagctc
tacttttactacgagaccaaggcttcggacgagaaggggaaatgtaagggcatccgctgt
gtggagcagaataacgctttctccacgttgtttgagaccctgcagtctctcttctggtcg
atcttcggcctgatcagcctctacgtcaccaacgtggacgccgaccaccagttcaccgag
tttgtcggcgccaccatgtttggaacctacaacatcatttcactggtggtgctcctcaac
atgctcatcgccatgatgaacaactcctatcagcacatcgctgaccacgcagacattgag
tggaagttcgccaggacgaagctgtggatgagctactttgaggaaggggccacgctgccg
gccccgttcaacatcatccccagccccaagtccttcctgtacctcatatgttggattaag
aggcaagtgtgcaagaggaccaactccaagcggcccgacacctttggatctctcggaagg
cgagcagcggagaatctgaggataaaccatcaatatcaggaggtgctgaggaatttggtg
aaacgttacgtggccgcaatgatccgagacgctaagacagaggaaggcctgactgaggag
aacttcaaggagctgaaacaagatatctcaagcttccgttacgaggtgatgggcatgatg
aagacggggaagcccgccctgcagggggcgaaggccagcggcagctcggtggaatccagc
ctcgcttaccctaactcctcgctcaaggtttcccccggccctcagagcagccaggccaaa
agcaaaagcaacagattcaagatcaccgcctccatcctcaagatgggcagctccacagcg
tcaccccggccgccagaggtcttcaacggtctgcctaacggactcctgcccctggagccc
gatgagagccccggtgacaagtcaggccagaggaggaacttccccaaagatatcaccgac
tttggcttgtttcagaaacgccaccgcaacgaagccacatcgggcgcagaagagacttcc
aggaagatgtactctttatcagaggaagcaggggagtctgggggctcggacgcagaggag
cgggacaaagagcgaacggccggaggcgaggaggagacaaagctctcagggggagaaatg
gcggaggaggctgcggtgacagcggcagacatcgaggatggcgaggtctcaaataccaag
tacggctcggaggaagacaaggaaaaatga
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