Hippoglossus stenolepis (Pacific halibut): 118122691
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Entry
118122691 CDS
T08308
Symbol
gabra6b
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04080
Neuroactive ligand-receptor interaction
hsp04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
118122691 (gabra6b)
04082 Neuroactive ligand signaling
118122691 (gabra6b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hsp04040
]
118122691 (gabra6b)
Ion channels [BR:
hsp04040
]
Ligand-gated channels
GABA-A
118122691 (gabra6b)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
118122691
NCBI-ProteinID:
XP_035035468
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Position
15:complement(17155569..17178853)
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AA seq
475 aa
AA seq
DB search
MLILKVDQGFLVVGCLRGMAFILTCFFLSCASGVWGSQIRDPSIYLDNITRILDRLLDGY
DNRLRPGFGGPVTEVKTDIFVTSFGPVSDVEMEYTMDVFFRQTWIDERLKFEGPIEILRL
NNLMVSKIWTPDTFFRNGKRSISHNMTTPNKLFRIMQNGTILYTMRLTINAECPMRLMNF
PMDGHACPLKFGSYAYPISEIVYTWKKGPLSSVEVPQESSSLLQYDLIGQTVSSERLKSN
TGEYVIMTVHFHLQRKMGFFLIQTYIPCIMTVILAQVSFWINKESVPARTVFGITTVLTM
TTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFSTLQANRELRKVAAMK
VAAQEAAAAAAAAPAAATGTDGEVSSVDATSVLKKRMNSAPVFDRPAKTFPNPPVNAQAF
LQQGSAVPDNNMLTGTSIIDKYSRILFPLSFGAFNLVYWIVYLTKDTMELSRDTV
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgctgattttaaaagttgaccagggatttctcgtggtggggtgtttgcgaggcatggct
ttcattttaacttgcttcttcctgtcatgtgcgagcggtgtttgggggagtcaaatcagg
gaccccagcatctatttggataacatcacgcgtatattggacagattattggatggctat
gacaacagactgcgacctggatttggaggtccagtcacagaggttaaaactgacatcttt
gtcaccagctttggaccagtgtcagatgtcgagatggaatacaccatggacgtgttcttt
cgtcagacgtggatcgacgagcggctaaaatttgagggtcccattgagatcctgcggctc
aacaacctgatggtcagcaagatctggacgccggacacctttttccggaatggcaagagg
tcgatctctcacaacatgaccacccccaacaagctgttccgcatcatgcagaacggaact
atcctgtacaccatgagattaactataaatgcagagtgcccgatgcgtctgatgaacttc
ccgatggacggccatgcctgcccgctcaagtttgggagttatgcttaccccatcagtgag
atcgtgtacacgtggaagaaaggtcctctctcctccgtcgaggtgccacaggaatcctcc
agcctgctgcagtacgacctgattggtcagacggtgtcaagcgagaggctcaagtccaat
acaggtgaatatgtcatcatgacggtccacttccacctacaaaggaagatgggcttcttc
ctgatccagacctacattccctgtatcatgaccgtcatcttggcccaagtctccttctgg
attaacaaggaatcagttccagctcggactgtgttcggtatcaccaccgtcttgaccatg
acgacgctcagtatcagcgcccgccactccctccccaaagtttcctacgccacagccatg
gattggttcatcgccgtttgctttgccttcgtcttctccgccctgattgagttcgcggcc
gtcaactacttctccaccctgcaggccaacagggagctgcggaaggtcgcagctatgaag
gtggcggctcaggaggcggcggcggctgcggctgcggctccggctgcggccacggggacc
gacggagaagtttcctcggtggatgccactagtgtgctgaagaagaggatgaactccgct
ccggtgttcgaccgcccggccaaaacgtttcccaacccacctgtcaatgcccaggccttc
ctgcagcagggttcagctgtaccggacaacaacatgctgaccggcaccagcatcatcgac
aaatactcccgcatcctcttccccctctcgtttggcgcgttcaacctggtctactggatc
gtgtatctcaccaaggacaccatggagttgtccagggataccgtctaa
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