Hippoglossus stenolepis (Pacific halibut): 118122699
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Entry
118122699 CDS
T08308
Name
(RefSeq) Down syndrome cell adhesion molecule-like protein 1 homolog isoform X3
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hsp04515
]
118122699
Cell adhesion molecules [BR:
hsp04515
]
Immunoglobulin superfamily
Other
118122699
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
FN3_DSCAM-DSCAML_C
V-set
Ig_VEGFR-1-like_5th
C2-set_2
VEGFR1-3_N_Ig-like
Pur_ac_phosph_N
Ig_5
Fn3_ROS1
Ig_6
C2-set_3
Sp38
Receptor_2B4
Fn3_Dep-1_3rd
Fn3_VIN3
ChitinaseA_N
Lit
Motif
Other DBs
NCBI-GeneID:
118122699
NCBI-ProteinID:
XP_035035477
LinkDB
All DBs
Position
15:9539573..9593547
Genome browser
AA seq
2117 aa
AA seq
DB search
MGGAEAPLIPPPCLAGQQGWRDLRGAQSPVQHGDSPPGHRTAPHTCQDCQTFLRNIPALY
GMWLVTLLLLYSLQEVHSEDVGSTRLYFVNASLQRVTYSSSVGVSLPCPAGGTPSAILRW
YLATGDDIYDVPHIRHVHANGTLQLYPFSPSAYNSYIHDNDYFCTAENQAGKIRSPNIRI
KAVFREPYTVRVADQRSMRSNVAVFKCLIPVAVQEYVSVVSWERDTVSIVPGNRFSLTSF
GALYISDVQKEDALSTYRCITKHKYSGETRQSNGARLSVMDPNESSPTILDSFQAGEVQA
GQSIELPCTAGGYPSPTVRWLKDGRPLPSDARWTRRLTGLTISDLRLEDSGSYACEVTNS
FGSKEVSGQLHVIDPLRVTLSPKNLKTGISSTLFFTCTVEGSPEYAITWYRNTEPINPDQ
HISIQGQHNDTLQITAAQKFHSGAYQCFASRKGHTAQDFSIILLEDGTPRIVSSFSERVV
NPGEPFSLMCGAKGAPPPAITWTLDDEPVVRDSTYKTSQYTLSDGLTVSHVNVSSPLIRD
GGVYRCVARNSAGSAEYQARINVRGPPRIRPMRDITAVAGRNTYITCRVIGYPYYSIKWL
KDGMQLPDNHRQVVFENGTLRLTDVQKGADEGTYLCSVLIQPQVSINQTVHVTVKVPPLI
QPFDIPSTSVGKLMYIACVVSSGDMPIRITWHKDGQLIVPGSASGVGIETKEFMSSLQIS
KVTLKHNGNYTCIASNAAATVSWERQLIVTVPPRFTVQPNNQDCIYGKAGVLNCSVEGYP
PPKVMWKHAKGVGNPQQYHPVPLTGRIQIMSNGSLLIRHVLEDDRGYYLCQASNGVGSDI
SKSMILTVKIPAMITSHPNTTMARKGQTKDLNCTARGEQPIIIRWERGDTVIDAERNPRY
SITINKKGDEVISTLKLNPAERGDSVFFSCHAINSYGEGRGLIQLTVQEPPDPPELEVRE
VKDRSMNLRWIQRFDGNSIITSYDIEYKNKSDSWDHMYTTRNISPTNNQANIVELHPACV
YSIRMYSYNKIGRSLPSKELTISTEEAPPDGPPMDVILQPMTSQSIRVTWRAPKKELQNG
VIRGYQIGYRENGPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPS
STEINATTLEDVPSEPPQNVRAISVTSDEAVITWAEPPRLTLHGVLKGYRVVFWSLFPDG
GGCCGGQAQWPMQKWGEMQNITTTREQVELRGLEKFTNYSVQVLAYTQAGDGVRSNVLYI
QTREDLPGPPAGIKAVPSSPSSVVVSWLPPHKPNGVIRKYTIYCSSPGSGQPAPSEYEAN
PEMLFYRITHLSRGKQYHIWAAAVTTAGRGNISSKVTVEPAGKVPGKILSFGGTVTTPWM
KEVRLPCSSVGEPAPTIKWTKDSEDSAIPVTADSQRQILSNGTLVLRSVKAEDSGYYTCT
ATNTLGFDTIIVNLVVQVPPDQPRLTVSTTSTSSITLAWIPGDNGGSSIRGFVLQYSVDN
TEEWRDVFISSTERSFRLDNLRCGTWYKVKLAAKNSVGSGRISEIIEAKTHGREPVFNKD
QPLLTHINSTHAGLNLQGWTSGGCPITDMMLDFRPKGTWAWQSLKANSTTQLFLSELREA
TWYELKMKACNSAGCGNQSSQFATTDYDGSTIPPIKSARGEGDDVKKLFSIGSPVILVTL
GVALLFIIRKKRKEKRLKRLRDAKSLAEMLISKNNRSIDTPVKGPPQGPRLHIDIPRVQL
LIEDKEGIKQIGEDKAAVPVTDTEFSQSVNPQNFCTGVSLHHQALIQNSGPLIDMSDIRP
GTNPVSRKSIKSAHSSRNRYSSQWTLSRPTQSQSTASARTLTSDWRTMGSHGITATESDS
YSASLSQDTDKGRNSMVSTESASSTYEELARAYEHAKLEEHLQHAKFTITECFISDSSSD
QMTTGTNDPADSMTSLSTPSEPGICRFTASPPKPQDYDRGKNVAVPIPHRANKSEFCNLP
LYMKTDPFFRKQGELHDPCPVVPPREASIRSLTQRAYHTQGRHKTLDPTKQPSLTLGHSG
LSSLGSSLGTATLPQRTLTMPSSNTAATASTSSTGSNPTNSNKVGGSRDSLLESSSSALG
RLQKQSAGAYSKSYTLV
NT seq
6354 nt
NT seq
+upstream
nt +downstream
nt
atgggcggggctgaggcgcctctcattccccctccatgcttagcggggcagcagggctgg
agagacctccggggagcacagtcgccagtccagcacggagactcgccgcccggccacaga
accgctcctcacacttgccaggattgccaaacattcctgagaaatatacctgctctttat
ggcatgtggcttgtaactttactcctgctgtactctctccaagaagtacacagtgaggat
gtgggctctaccaggctgtactttgtgaacgcctccctgcagagggtaacctactccagc
tcggtgggggtgtccctgccctgtccagcagggggcacccccagtgccatactgcgctgg
tacctggccaccggcgatgacatctacgacgtgccgcacatccgccacgtgcacgccaac
ggcaccctgcaactgtaccccttctcgccctcggcctacaacagctacatccacgacaat
gactacttctgcactgccgaaaaccaggccggcaagatccggagccccaacatacgcatc
aaagctgttttcagggagccctacaccgtgcgagtggcggaccagcgctcgatgcggagc
aacgtagccgtgtttaagtgcctcatccccgttgccgtgcaggagtatgtcagcgtcgtg
tcctgggagagagacaccgtgtccatcgtcccaggtaacaggttctctctcacctccttc
ggagctctttacatctctgatgttcagaaggaggacgccctctccacataccggtgcatc
accaagcataagtacagcggcgagacgcggcaaagcaatggagccaggctctccgtaatg
gaccccaacgagtcctcgcccaccatcctggacagcttccaagcaggggaggtgcaggca
ggccagagcatcgagctcccctgcaccgcaggaggttaccccagccccaccgtacgctgg
ctgaaagatggtcgccccttgccctcagatgcccgctggacacggcgtttgacagggctg
accatcagtgacctgaggctggaggacagtggcagctatgcctgtgaggtcaccaacagt
tttggctcaaaggaggtgtctggacagcttcacgttatagatccactacgtgtgacctta
tcgcctaagaacctgaaaacaggcatcagcagcacactgtttttcacctgcactgtggag
ggctctcctgaatacgccatcacctggtacaggaacacagagcccatcaaccccgaccag
cacatctccatccaggggcaacacaacgacacgctgcagatcactgcggcacagaagttc
cactccggggcctaccagtgcttcgcctcccgaaagggccacactgctcaggacttttcc
attatactgctagaggatggtactcctcgtatcgtgtcttccttcagcgagcgggtggtg
aaccccggcgagcctttctccctcatgtgcggggccaaaggagccccacccccggcgatc
acctggacattggacgacgagcctgtggttcgggactccacctacaagaccagccagtac
accctgtcagacggcttgaccgtgtcgcacgtcaacgtcagcagcccgctcatccgggat
gggggagtgtaccgttgcgtcgcacgcaactcggccggtagcgccgagtaccaagcgcgc
ataaacgtaagaggtccacctcgaatcagacccatgcgggacatcaccgcagtggcgggc
aggaacacctacataacgtgccgcgtgattggctacccgtattattccatcaagtggctg
aaggacggcatgcagctgcccgataatcaccgtcaagtggtgttcgagaacggcaccctg
aggctgacggacgtgcagaagggcgccgacgagggcacctacttgtgcagcgtcctgatc
cagccccaggtgtcgatcaaccagaccgtccacgtaactgtcaaagtgccgccgctcatc
cagccctttgatatcccctctacctcagtggggaagctcatgtacatcgcctgcgtggtg
tcatccggggacatgcccatacgcatcacctggcacaaagatggccagctcattgtgccg
ggctccgcctctggcgtcggaatcgagaccaaagagttcatgagctccctccaaatctcc
aaggtgacactgaagcacaacgggaattacacctgcatcgccagcaatgccgccgccacc
gtcagctgggagaggcagttgatcgttaccgtgccaccgcggtttacggtgcagcccaac
aaccaggactgtatctatggcaaagctggagttctcaactgctccgtggaaggttatcca
ccgccgaaagtcatgtggaaacacgccaaaggtgtgggaaaccctcagcagtaccaccca
gtccctctaaccggccgaatccagatcatgtcgaacggctctctgctcatccgacatgtt
ctcgaggatgaccgggggtactacctctgtcaggcctccaatggagtgggctcagacatc
agtaagagcatgatcctcactgtcaagattcctgccatgatcaccagccaccccaacacc
accatggcaaggaaaggccagaccaaggacctgaactgcacagcgcggggcgagcagccc
atcatcatccgctgggagagaggggacaccgtcatcgacgcagagaggaacccacgttac
tccatcaccatcaacaagaaaggggacgaagtcatctccaccctcaagctgaacccagcc
gaacgaggagattctgtcttcttctcctgccatgccatcaactcctatggagagggtcga
ggtcttatccagctcactgtgcaagaaccaccagatcccccggagctggaagtgagggaa
gtgaaggacaggagcatgaacctgcgctggatccaacggtttgacggaaacagcatcatc
accagctatgacatcgagtataagaacaagtcagactcctgggatcacatgtacacaacc
aggaacatctcacccaccaacaaccaggccaacatcgtagagctgcacccggcctgtgtt
tacagcatccgcatgtactcctacaacaagattggccgcagccttcccagcaaagagctc
acgatcagtacagaagaagcaccaccagacgggccgccaatggatgtaatcctccagccg
atgacatcccagagcatacgggttacatggagggcgccaaagaaggagctgcagaacggg
gtgatccgaggttaccaaatcggttacagggagaacggtccaggcagcaacggacagtac
agcatagtggagatgaaagctacaggggacagcgaagtgtacaccttggacaacctaaag
aagtttgcccagtacggggtcgtggtccaggccttcaacagagccgggacgggcccatcc
agtactgagatcaacgcgaccacgctggaagacgtgcccagcgagcccccgcagaacgtg
cgagccatctcggtgacgtcggacgaggcggtgatcacgtgggccgagcctccacggctg
acgctgcacggtgtgctgaaaggctaccgtgttgtgttctggtccctcttccctgatgga
ggtgggtgctgtgggggccaggcccagtggccgatgcagaaatggggggagatgcagaac
atcaccacgacccgtgagcaggtagagctgcgagggttggagaagttcaccaactacagt
gttcaggtgctggcctacacgcaagccggagacggggtccgcagcaacgtgctgtatatc
caaacccgcgaggaccttcctggaccgccggctggaattaaggcagttccctcgtctcca
agtagcgtggttgtgtcctggttaccaccccacaaaccaaatggtgtaatccgcaagtac
accatctactgctccagtccaggttctggacagccagcgcccagcgagtacgaggccaac
cccgagatgctcttctaccgaatcacgcacctcagccgcggtaaacaataccacatctgg
gctgcagccgtgacaactgccggccgtgggaacatcagctcaaaggtcacagtggagcct
gctgggaaagtcccgggtaagatcctgtccttcggtggcacagtgaccacaccctggatg
aaggaagtacgtctgccctgcagctcggtgggagagcccgcccccacgattaaatggacc
aaagacagtgaggactctgccattccagtgacggccgacagccagcggcagatcttatcc
aatggcacgctggtgctgcgttcggtcaaagcagaggactctgggtactacacctgcacg
gccactaacacgctgggctttgacaccatcatagtcaatcttgtggtgcaagttcctccg
gaccagcctcgtctgactgtctccaccacctccacctcctccatcaccctggcttggatc
ccgggggacaatggaggaagctccatcagagggtttgtgctgcagtattctgtggacaac
acggaggaatggagggatgtgttcatcagctccactgagcgctccttcaggctggacaat
ctgcgctgcggaacctggtacaaggtcaagctggccgccaagaacagcgtgggctcaggg
cgcatcagtgagatcatcgaggccaagacccacggaagagagccggtgttcaacaaggac
cagccgttactcacccacatcaactccacacacgcagggctcaacctgcagggctggacc
agcggcggctgtcccatcaccgacatgatgctggacttcagacctaaaggcacctgggcc
tggcagagcctcaaggccaactccaccacgcagctcttcctcagcgagctgcgggaggcc
acgtggtacgagctcaaaatgaaggcctgcaacagcgccgggtgtggcaaccagagctcc
cagtttgccaccaccgactacgatggcagtacaatcccccccattaaatcagcccgtggc
gaaggcgatgatgtgaaaaagctcttctccatcggctctcccgtcatcctggttactctg
ggtgttgcgttgctcttcattatccgcaagaaacgcaaggagaagcggctcaaacgtctc
agggatgctaagagcctcgctgagatgcttatcagcaagaacaatcgcagtatagacacg
cctgtgaagggccctcctcaagggccgaggctccacattgacatcccacgtgttcagctg
ctcattgaggacaaggaaggcatcaaacagataggcgaggacaaggcagcggtgccagtg
acagacacagagtttagccaatcagtaaatccacagaacttctgcacaggcgtgtctctg
caccaccaagccctcattcagaattcagggcctttgattgacatgtcagacatccgtcca
ggcacaaaccccgtgtccaggaagagcatcaaatccgctcacagctcccgcaacagatac
tccagccagtggacgctgagccggccgactcagagccagtcgacagcctcggcacgaact
ctgacctcggactggcgaacgatgggctctcacggcatcactgcgacggagagtgacagc
tacagcgccagcctctcccaagacacagataagggtcgcaacagcatggtgtcgactgag
agcgcctcctccacctacgaggagctggcgagggcctacgagcacgccaagctggaggag
cacctgcagcatgccaagttcaccatcacggagtgcttcatctccgacagctcgtctgac
caaatgaccacaggaaccaacgacccagcggacagcatgacctccctcagcacgccgtct
gaaccgggcatctgccgcttcaccgcctcgccgcctaaaccgcaggactacgaccgtggt
aaaaatgtggctgtgcccattccccaccgcgccaacaaaagtgaattctgcaacctcccc
ctctacatgaagacagacccattcttccgcaagcaaggggagctccacgacccatgcccg
gttgtgccgccgcgggaagcctcgatccgcagcctgacgcagcgggcgtatcacacccag
ggccgtcacaaaactctggaccctaccaagcagccgtccctgacgctgggccactctggg
ctgagcagcttgggttcgagcttgggcaccgccaccttgccccaaaggactctcaccatg
cccagctccaacaccgcagcaacagcttccacttccagcacaggcagcaaccccaccaac
agtaacaaggtggggggctccagagactcgctgcttgagagcagctcctctgcactgggg
agactgcagaaacagagtgcgggggcctactccaagtcatacacactggtgtag
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