Hippoglossus stenolepis (Pacific halibut): 118122857
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Entry
118122857 CDS
T08308
Name
(RefSeq) tripartite motif-containing protein 16
KO
K12006
tripartite motif-containing protein 16 [EC:
2.3.2.27
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsp04121
]
118122857
Enzymes [BR:
hsp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118122857
Ubiquitin system [BR:
hsp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
118122857
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-B_box
ANCHR-like_BBOX
End3
ATG17_like
LpxB
C_Hendra
DUF6894
DUF4200
PilJ
IMD
Motif
Other DBs
NCBI-GeneID:
118122857
NCBI-ProteinID:
XP_035035643
LinkDB
All DBs
Position
16:complement(10282625..10286244)
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AA seq
505 aa
AA seq
DB search
MATLSCNKEENSNDIQHNANIKEETEEPPIQMCETQDVPCDSCMDSPSKAVKSCLTCLVS
YCEAHLRPHLENTKFQNHRLVDPLHDIDCRICEVHHLPLERFCLVDGCCVCLDCERQAHE
GHTIAPVGEARTQIETQLQKKQEEINQNTSAAGKTIEKLQSNNDLIKASVQEVCEFVEQQ
FATVQAAVKEARRVVMEVLEEEQRRALRQADGIQAHLEQRRTELMKTLAQMNKMSRIKSD
VDFLQEYSEWRKGASDVGLPSVHINRMDHLTSYVQVLTDPTQELCDVILSSYRDQLSLFC
KGGTKSPKPESQTPSLSDPETRDDFLKYTIGLTFDPDTTHHFLRVTEDNRKLTNTSPWQH
SYPDHHDRFEYWRQALTSQSVYSGRHYIEVELSGEGSHVGVTYKSIDRKGEHGTCCITGN
DFSWCVGRNSRGFFAWHAGLETSLEVTEVKRIGLYVDFHKGSVSFYDASGPMELLHRYRA
DFIEPLYVIVWLSKKDNVVCLVNAE
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgctcagctgcaacaaagaggagaattcgaatgatattcaacacaatgccaac
ataaaggaggaaacggaggagccacccatccagatgtgtgagactcaggatgtgccgtgc
gactcctgcatggacagccccagcaaggctgtaaaatcctgcctgacctgtctggtttct
tactgcgaggcccacctcagaccacatctggagaacaccaagtttcaaaaccaccgtctg
gtggatcccctgcacgacatcgactgtcggatttgtgaggtgcaccatcttcctctggaa
cgcttctgcctggtggacggctgctgtgtgtgtctggactgtgagagacaagcgcacgaa
gggcacacgattgcacctgttggggaggcacgcacacagattgagactcagctgcagaag
aaacaagaagagatcaaccagaacacctcagcagctgggaaaaccattgaaaagctgcag
agcaacaatgacctaataaaggcctcggtgcaggaggtttgtgaattcgttgaacagcag
tttgccaccgtgcaggcggctgtgaaggaggccagaagagtggtgatggaggtgctggag
gaggagcagagaagagcactcaggcaggcggatggcatccaggcacatctggagcagagg
agaacggaactgatgaagactttggctcaaatgaacaaaatgtccaggatcaagtccgat
gtcgacttcctgcaggaatactccgagtggaggaaaggagcttcagatgtgggtctgccc
agtgtgcacatcaaccgcatggaccatctcacctcctatgtccaagtcctgacggatcct
acgcaggagctgtgtgatgtgattctctcctcctacagggaccaactgagcttgttttgt
aaagggggtactaaatccccgaagccggaatctcaaactccatccctgtctgatccagag
acccgagacgactttttgaaatacacaatcggtttgacctttgaccccgacaccacccac
cacttcctgcgagtaacggaggacaacagaaagctcaccaacaccagcccctggcagcac
agctacccggaccaccacgatcgctttgagtattggcggcaggcgctgacctcgcagagc
gtttactcgggcaggcactacattgaggtagagctgagcggggagggttctcacgtgggg
gtcacatacaagagcatcgatcgtaagggtgagcacggcacctgttgcatcaccgggaac
gacttttcctggtgcgtggggaggaacagccgaggtttctttgcctggcacgctggtctg
gagacgtctctggaggttactgaggtcaaacgaatcggcctgtatgtggacttccacaaa
ggctctgtgtctttctatgatgccagtggtcctatggagctgctccacaggtaccgggcg
gatttcattgagcctttgtatgtgatcgtctggctgtcaaagaaagacaatgtagtttgc
ctggttaatgcagaatga
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