Hippoglossus stenolepis (Pacific halibut): 118122921
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Entry
118122921 CDS
T08308
Symbol
colgalt1a
Name
(RefSeq) procollagen galactosyltransferase 1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp00310
Lysine degradation
hsp00514
Other types of O-glycan biosynthesis
hsp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
118122921 (colgalt1a)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
118122921 (colgalt1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
hsp01003
]
118122921 (colgalt1a)
Enzymes [BR:
hsp01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
118122921 (colgalt1a)
Glycosyltransferases [BR:
hsp01003
]
O-Glycan biosynthesis
O-linked Gal type
118122921 (colgalt1a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
118122921
NCBI-ProteinID:
XP_035035765
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All DBs
Position
16:11429421..11436865
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AA seq
613 aa
AA seq
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MPGANLRWLSAAPPLLLLLTCCAPARAYFAEERWSPESPLLAPRVLLALICRNSEHSLPY
FLGTIERLNYPKDRMALWVATDHNEDNTTVILRDWLVKVQNLYHNVEWRPKEEPRRYTDE
EGPKQWSDLRYDHVMKLRQVALESAREMWADFFMLADCDNLLTNPDMVWKLMQENKTIIA
PMLESRAAYSNFWCGMTSQGYYKRTPAYLPMRKRVRRGCFAVPMVHSTFLIDLRKEASTQ
LAFHPPHPEYNWAFDDIIVFAFSARMAEVQMFVCNRETYGYFPVPLRSHNTLRDEADSFL
HSVLEVNVRNSPVMPSKYILVPTKQPDKLGFDEVFMINLQRRTDRRDRMVRTLYEQEIAC
KVIAAVDGKAMNISEINAMGIHMLPGYSDPYHGRPLTKGELGCFLSHHKIWKEIVERRLP
ISLVIEDDLRFEIFFKRRLMNLMSEVQDEGLDWDLIYIGRKRMQVDHPEKAVPNVHNIVE
ADYSYWTLGYMISLQGAEKLLKAEPLKRILPVDEFLPIMFDKHPVSDYMEQFESRDLKAF
SAEPLLVYPTHYTGDSGYISDTETSTVWDNEKVRTDWDRARSGKTQEQAEISTEAQNSDV
LQSPLDSAARDEL
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgcccggtgcaaacttgcgctggctctccgccgccccgccgctcctcctgctcctgacc
tgctgcgctccagcccgggcatattttgcggaggagcgctggagccccgagtccccgctc
ctggctccccgggtcctcttagccctcatctgccggaactcggagcactctctgccctac
ttcctcggcaccatcgagcgcctcaactatcccaaggaccggatggctctgtgggtagcg
acggatcataacgaggacaacaccacagtcatcctgcgtgactggcttgtcaaggtgcag
aacctttaccataatgtggaatggaggcccaaagaggaacccagacgttacactgatgaa
gagggtccaaagcaatggagcgacctccgttatgaccacgtcatgaagctccggcaagtg
gcgctggagtcggctcgtgagatgtgggccgacttctttatgttggcggactgcgataac
ctcctcaccaatcccgacatggtctggaagctcatgcaggagaacaagaccatcattgct
ccaatgctggaatcccgtgcggcctattcaaacttctggtgtggcatgacttcacagggt
tactataagcgcacgccggcctacctacccatgaggaagcgcgtgcgtaggggctgcttc
gccgtacccatggtccactccaccttcctgatagacctcaggaaagaggcgtccacacag
ctggcctttcacccaccacacccagagtacaactgggcttttgatgacataatcgtgttt
gccttctccgctcggatggcagaggttcaaatgtttgtatgcaacagagagacctacgga
tacttccctgtgccccttcgatcccataacactttgcgagatgaagccgacagcttcttg
cactctgtcctggaggtgaatgtgcgaaattccccagtgatgccttccaaatacatactt
gttcctacaaaacaacctgacaaactgggatttgacgaggtgttcatgataaacctgcag
aggcgaactgaccgtcgggaccgaatggtgaggacactgtacgagcaggagatcgcttgt
aaggtcattgcagccgtagatggaaaggcgatgaatatcagtgaaattaatgctatgggc
atccacatgctccctggatacagtgacccttatcacgggcgcccactcacaaaaggagag
ctgggatgtttcctttcccatcataaaatctggaaagagatcgtggagcgacgcttaccc
atctctctggtgattgaagacgacctgcgattcgaaatcttcttcaagcgtcgcctaatg
aacttgatgagcgaggtgcaggatgaaggactggactgggatctcatttatatcggtcgt
aagagaatgcaagtggatcacccagagaaagcggtgcctaatgttcacaacatagtggaa
gcagactattcatattggacacttggttatatgatatcgctacaaggtgcagagaagctt
ttgaaagcagaacctctaaagaggattttgccagtggatgagtttctccctatcatgttc
gataaacaccctgtgtctgattatatggagcagtttgaaagcagggacctgaaggcattt
tccgcagagcccctcctggtgtatccgacgcactacacgggcgactcaggctacatcagc
gacacggagacctccacggtgtgggacaacgagaaggtccgcacagactgggacagggcg
cgctcgggaaaaacccaggagcaggctgagatcagcaccgaggcccagaactcggatgtg
ctccagtctcctctggacagcgcagcacgggacgagctatga
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