Hippoglossus stenolepis (Pacific halibut): 118122929
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Entry
118122929 CDS
T08308
Symbol
arhgap23a
Name
(RefSeq) rho GTPase-activating protein 23 isoform X1
KO
K20315
Rho GTPase-activating protein 21/23
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118122929 (arhgap23a)
Membrane trafficking [BR:
hsp04131
]
Endosome - Golgi transport
Others
Others
118122929 (arhgap23a)
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
118122929 (arhgap23a)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PH
PDZ_6
PH_9
PDZ
PDZ_2
PH_11
YceD
Motif
Other DBs
NCBI-GeneID:
118122929
NCBI-ProteinID:
XP_035035776
LinkDB
All DBs
Position
16:15204344..15275783
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AA seq
1841 aa
AA seq
DB search
MWTVRHADLSKPCAPMPAAMLPCPAPVGSDWSFQNPVGVDCSSPEPRCIWLAVLRGTTGP
VPPPSPPPVMPTGPRKSSLQPRAKGRRDGLSSAGDNPRPPMATRSGREGVGMGWKGPRTL
VLRKNSQGFGFTLRHFIVYPPESTMHTNLKDEENGNGKGYQKGRLEPMDTIFVKNVREKG
PAHQAGLCTGDRLVKVNGESVLGKTYSQVIALIQNSESVLELSIMPKDEDVLQLVSAYSQ
DAYLTGNEPYSGGAEHLPPPPPLCYPRTKTTTPAGAPPPTPMGQNQLDNWSRWPGSSSPS
SPLDNHSALGSPASWQEGRAGEPGGVGHSSPAHRTEEIQYGMTSKQPQGQTRGRSYSSSS
SSGGPLSSPLQVHYPNHHAVSPPQPQPRKSSSAWTSPPLPQLSHGQNERCQQALTDWFYS
QQPEQSGRCMQTRHRSYSQDRLSETRRQQQRSGGWPHSASQDTLLLLQQSGPGPHGEPCW
SYGDCEGGPGRGHHGPNYTRTRSENLLAQYDRHGRSLEMLDRAAAGVVSPRFERPSWHQQ
APQPPPRTDAYPRQGGHFGASQPPLVPRHTQPHSKHHPQPHTQAHLQPQAQQAAPQTRRL
PTGQSMDDQPVGYRSYSPSFYRKTGRIMQQAHSFRDPSYSGPHLNWNSTPKTSPPEGTAA
PITSSTASPLASTTPESQDRAYRPTNHERERGSVEGETEVVPQTQEVVLRQKPPTGRRNA
HGLRHPHYALPMDGLEPSLFSSDPQDSAPAPGSSGDVAPRKPNGNLAPLSIEDDSLASIP
FIDEPTSPGVDLRARHVPASSVVSSGMSSAPAVVTSPASPTFTFPLTRLFSHDCSSIKSS
RRSSYLLAITTERSKSCDEGLNTFREEGRVFSRLPKRVKSFFTDGSLDNLGTAEEVRSKR
HSTSELGNITYSDVRREGWLHYKQILTEKGKKVGSGMRPWKRVFSILRSHSLFLYKDKRE
AVLRGATIGGSAEDDQPISIRGCLVDIAYSETKRKHALRLTTQDFCEYLLQAEDREDMLD
WIKVIRENSKTDSEELGFSRQALINKKLNDYRKQSPTGSKPDSSPRMPRMKPPFLLTKTE
NAAAAPRSPKQDGKDESSPPKSPWGINIMKKTKKAGPKAFGVRLEDCQPGVINKFIPLIV
EICCGLVEDMGLEYTGIYRVPGNNAVVSMLQDQLNKGVEINPAEEKWQDLNVVSSLLKSF
FRKLPEPLFTNDKYNDFIDANRMDNASDRLKTMKKLIRDLPDYYFHTLKFLVGHLKTVAD
SADKNKMEPRNLALVFGPTLVRTSEDNMKDMVTHMPDRYKIVETLIQHYIWFFTDELDKD
EKTPVDTEDVQPVPNIDHLLPNIGRTALLGEASDSTNSDSAKSKGSWGSKKDLTAKDFLT
LSIMSAVSGRKRRKRHNGRRVGSSTDDDSEHEPIKAGHLGAEEEEEAASPVGDTAPRAEA
EEDDDDEEEEEEEDEEVVESGVKEEVEQEVVAVIPSRPCCKEEEDAGGRQAVILLQEEEA
RAEVKGPAWRSPEDARSIVSGYSTLSTLGRSLGSEGRGDDADDEHSELVSETDNESGFAS
RSLTQERPDKHTPVNTQPPAAPRSFLYTHYKPPVLSPTNLLAPPTPLTHTPDSAERSEGG
ACSTTPSSSSFSSSSTTHRLHSRPSFNSHKLIQCDTLARKKLKSEKAKARSLEMMELSEA
SAQCDGAGSGSDGAPRMRRDTSRTNPSSGSSQESLRPARPKTALPPCEAASFTPTGPGGR
SLAEQVRARLMGSADDLRSVGLRKPLSPETRRKRRAWRRHTVVASPTETSDKRPPMIVND
FPLSPINQNQVKSPGLPRDADVLEQGPAARQVPTSRFHQYL
NT seq
5526 nt
NT seq
+upstream
nt +downstream
nt
atgtggacagtgaggcatgcggatctgagcaaaccctgcgccccgatgcccgctgctatg
ctcccttgccctgcaccggtcgggtctgactggagcttccagaacccggtgggggtggac
tgcagctcccccgaacctcgctgcatctggctggcggttctgcgcggcaccacaggccct
gtgccaccgccgtccccgccacccgttatgcccactgggcccagaaaaagctctcttcag
cccagggctaaggggcggagggatggtctctcctcagccggtgacaaccctcggccgccg
atggcgacccggtcgggaagggagggggtcggcatgggctggaagggtccccggacgctg
gtcctccgcaagaactcccagggttttgggttcacgctgcgccacttcatcgtttaccct
ccagagtccaccatgcacaccaacctcaaggatgaggagaatggaaatggaaaggggtat
cagaaaggtcgcctggagccgatggacaccatatttgtgaagaacgtgagggagaaaggt
ccggcccaccaggcgggcttatgcacaggggatcggctggtgaaagtgaacggcgagagt
gttttagggaagacgtactcgcaggtgatcgccctcattcagaacagtgagagcgtgctg
gagctctccatcatgccaaaagatgaagacgtgcttcagttggtaagtgcatactcccag
gatgcctacctgacaggcaacgaaccctattcagggggagctgagcacctcccaccacca
ccgcccctctgttacccacgcaccaagaccaccacccctgctggagcccctccacctacg
cccatgggccagaaccagctggataactggagtcgctggccaggctcttccagcccctct
tcacccctggataaccactcggctttgggcagccccgccagctggcaggaggggcgggcg
ggagagcctggaggtgtgggtcacagcagcccagcccaccgcacagaggagatccagtat
ggtatgaccagcaagcagcctcagggccagaccagggggcgctcctactcttcctcttcc
tcgtcaggaggccccttgtccagcccgctccaagtccactaccccaaccaccacgctgtc
agtcccccgcagccccagccgcggaagtccagctcggcctggaccagtcctcccctgcca
cagctcagccacggtcaaaacgagcgctgccagcaggcgctcactgactggttctacagc
cagcagcctgagcaatcaggacgctgcatgcagacgcgccaccgcagctactctcaggac
cgactcagtgaaacaaggaggcagcagcagcggtcgggtggctggccgcacagcgcctcc
caggacactctgctgttattgcagcagtcaggaccaggaccccacggagagccctgctgg
tcatatggagactgtgaggggggcccaggtaggggccaccatggccctaactatactcga
actcgctctgaaaaccttctggcccagtacgatcgtcatggccgctcgttagagatgctg
gaccgagcagcagctggagtggtctcacctcggtttgagaggccgtcgtggcaccaacag
gctccacagccgccccccaggactgatgcttacccaagacaggggggacattttggtgca
tcacaacctcctctggtaccccgacacacacagccacattctaaacaccacccacagcca
catacccaggcccacttgcagccccaggcccaacaagctgccccccagaccaggcggctc
cccactgggcagagcatggacgaccagccggtgggctaccgcagctacagcccctctttt
taccgcaagacaggccgcatcatgcagcaagcccactctttcagggacccctcatactct
ggccctcacttgaactggaactcaacacctaaaaccagccccccagagggcacagcggcg
cccatcacctcctctacggcctctccccttgcctccaccactcccgaatcccaggataga
gcttacaggccgacgaaccacgagagggaacgagggtcggtggagggggagacggaggtg
gtgccacagacccaggaagttgtgttgaggcagaaacctcccaccgggcggaggaacgcc
cacggcttgcgccatccccactacgcgctgcccatggacgggctggaaccctcgttgttt
tcctcagatcctcaggactcagcccccgctcctggttcctcgggagacgtagccccgcgc
aaacccaatggcaacctcgccccgctctccatagaggatgactctctggcctccatcccc
ttcattgatgagccaacgagccccggcgttgacttgcgcgcccgccacgtgccggcgtcc
tccgtggtgtccagcggcatgagttcggcgcccgccgttgtcaccagccccgcctccccc
accttcaccttccccctcactaggctcttctcacacgactgcagcagtattaaatccagt
cgccgttcctcctatcttctagccatcaccacggagcgctccaagtcatgcgacgaagga
ctcaacacgttcagggaggaaggccgggtcttctcgaggctaccaaagagagtgaagagt
ttcttcaccgacgggtcactggacaaccttgggacggcagaggaggttcgatctaaacgt
cactccacctccgagctgggaaacatcacttacagcgacgtgcggagagaaggatggctg
cactacaaacaaatcctcaccgagaagggcaagaaggtgggcagcggcatgcgtccgtgg
aagcgagtcttttcgatacttcgctcccattcgctgttcctctacaaggacaagagggag
gcggtgctccgcggggccacgatcggtggctcggcggaggacgaccagcctatcagcatc
cggggttgcctggtggacatcgcatacagtgagaccaaacgaaaacacgccctgcgactg
accacgcaggacttctgtgagtacctgctgcaggcggaggaccgggaggacatgctggac
tggataaaggtcatcagggagaacagcaagacagacagcgaggagcttggattttccaga
caggccctcatcaataaaaaactgaatgattacagaaaacaaagtccgacaggcagcaag
ccagactcgtctcccaggatgccccgcatgaaacctcccttccttctcaccaagacagag
aacgccgctgcagcgccacgctcccccaaacaagatggcaaagatgagagcagcccgcca
aagtctccgtggggaatcaacatcatgaagaaaacgaagaaggccgggcccaaagctttc
ggtgtgaggttggaggattgtcagcctggtgtaattaacaagttcatcccattgattgtg
gagatctgctgcggcctggtggaggacatgggtctggaatacaccgggatctacagggtc
ccagggaataacgccgtagtgtcgatgcttcaggatcagctcaacaagggcgtcgagatc
aaccctgcagaggagaagtggcaggacctgaacgtcgtcagcagcttactcaaatccttc
ttcaggaaactcccagagccgctcttcaccaacgacaagtacaacgactttattgatgcc
aatcggatggacaatgcatctgacagattaaagacgatgaagaaactgatccgagacctc
cctgattattatttccacactctgaagttcctggttggtcacctgaagacggtagcagac
agtgcagataaaaacaagatggagcctcgtaacctggcgctggtgtttgggccgactctg
gttcggacgtctgaggacaacatgaaagacatggtcacacacatgcccgaccgctacaag
atagtcgagacgctcatccagcattacatctggtttttcactgacgaactagacaaggat
gaaaagacgcctgtggacacggaggacgtgcagcctgtccccaacatcgaccacctgctg
cccaacatcggcaggaccgctctgctcggggaggcctcagactcaaccaacagtgactca
gctaaatcgaaggggtcgtgggggtcaaagaaggacctcacagcgaaggatttcctgact
ctgtccatcatgtcagctgtatcaggccgcaagcgcagaaagcggcataacggccgccgc
gtgggcagcagcactgacgacgactcagagcacgagccaatcaaagccggacatctaggg
gcagaggaggaagaggaggcggcgtctcctgtaggggacactgctcctcgggcagaggca
gaggaagatgacgatgatgaggaagaagaagaagaggaagatgaggaagttgtagaaagc
ggagtgaaagaggaggtagaacaagaggtggtggcggttattcccagtcggccgtgctgc
aaagaggaagaggatgcaggaggaagacaggcagtgatattgctgcaggaggaagaggca
agggcagaggttaaagggccggcatggcgatcgccagaggatgcacgctccattgtttcc
ggttactccaccctctccaccttaggacgcagccttgggtcagaggggaggggggacgat
gctgatgacgagcacagcgagctggtgagcgagacggacaacgagagcggctttgcctcg
cgctccctcacccaggagagacccgataaacacacacccgtaaacacacaaccgccagca
gccccgcgcagcttcctctacacacactacaaacccccggttctctcacccacaaacctg
ctcgccccgcccacaccgctcacacacacaccagactctgcggagaggagtgaaggagga
gcgtgctccaccacgccctcgtcctcctccttctcctcctcctccaccactcacagactg
cactcacggccttcctttaactcccacaagctgatccagtgtgacactctggccaggaag
aagctgaagtcggagaaggcaaaggctcgctctctggagatgatggagctgtccgaggcc
tccgcccagtgcgacggggccggctctgggtcggacggtgcgcccagaatgaggagggat
acatccagaaccaacccctcctcaggcagcagtcaggagagcttgcgcccggcccggccc
aaaactgctctgccgccctgcgaggccgcctccttcacccctaccggccctggcggcagg
tctctggctgagcaggttcgcgctcgtctgatgggatccgccgacgacctgcgcagcgtg
ggactgcgaaaaccgctctcacctgagacgcggaggaagagacgggcctggcgcagacac
accgtggtagcctccccgactgagacgtccgacaagagacccccaatgattgtcaatgac
ttccccctgtctcctatcaatcaaaaccaggtcaaatcaccagggctgcctcgggatgcc
gacgttctcgaacaaggacctgctgcacgtcaagtacccacctctagattccaccagtac
ctgtga
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