Hippoglossus stenolepis (Pacific halibut): 118122939
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Entry
118122939 CDS
T08308
Name
(RefSeq) fascin
KO
K23551
fascin 1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118122939
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hsp04812
]
118122939
Membrane trafficking [BR:
hsp04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
118122939
Cytoskeleton proteins [BR:
hsp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
118122939
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fascin
FRG1
RicinB_lectin_2
FGF
Beta-tre_PLH30
Motif
Other DBs
NCBI-GeneID:
118122939
NCBI-ProteinID:
XP_035035810
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All DBs
Position
2:24318447..24325445
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AA seq
489 aa
AA seq
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MSDGDVLRIPLGLVNCGGKYLTAETFGFKVNASAGSLKKKQTWTLEQTGEDGSAVFLLSH
LGRYLATDKDGNVTADSETRGRDCRFVVTAHEDGRWSLQSEPHGRFLGGSEDRITCFAQT
ASPAERWSVHLAVHPQVNLYSLARKRFAHLSVQGQEVSINRDVPWGVDSLVTLVYRDQRY
HLETSDNRFLRNDGTLATKTDKDTGYVLEFRSGKVAFRDCNGRYLAPGGPTGTMKSGKSG
RVGKDELFGLERSHAQVVLTAGNERNVSTRQGMDLSANQDEEGDQEVFQLEMSREDRKCA
FRSASGKYWTLTATGGLQCTASTKSANSFFELEWRDGRVCVRAANGKYVIAKRNGQLSAS
IDNAAEAEQFLMKLINRPIIVLRGEHGFIGARKAGMATLDSNRASYDVFQLEFHNGAYSL
KDSQGKYWCVGDDTAVACSSSTPVQFLFEFCDLNKMAIRVLGGKYLKGDHAGGLKASVDS
LDSATLWEY
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacggggacgtgctgcggatccctctggggctcgtcaactgcggcggcaagtac
ctgacggcggagaccttcggcttcaaggtcaacgcgtcggccggcagcctgaagaagaag
cagacgtggaccctggagcagaccggggaggacggcagcgcggtgttcctcctctcccac
ctgggccgctacctcgccacggacaaagacggcaacgtcaccgcggacagcgagacgcgc
ggccgggactgccgcttcgtggtgaccgcgcacgaggacgggcggtggtcgctgcagtcg
gagccgcacggccgcttcctcggcggcagcgaggaccgcatcacgtgcttcgcgcagacg
gcgtcgccggcggagcgatggagcgtgcacctggccgtgcacccgcaggtcaacctgtac
agcctggcgcgcaagcgcttcgcccacctgagcgtgcaggggcaggaggtgtccatcaac
cgggacgtgccctggggggtggactccctggtgaccctggtgtaccgggaccagcgctac
cacctggagacctccgacaaccgcttcctgcgcaatgacggcaccttggccaccaagacg
gacaaggacaccggctacgtgctggagttccgctccgggaaagtggcgttccgcgactgc
aacgggcgctacctggcccccgggggccccaccggcacgatgaagtccgggaagagcggc
cgcgtcgggaaggacgagctgttcggcctggagcgcagccacgcgcaggtcgtgctcact
gcaggcaacgagaggaacgtgtccacgaggcaaggcatggacctgtcagccaatcaggac
gaggaaggggaccaggaagtcttccagttggagatgagccgtgaggacaggaagtgcgcc
ttcagatccgcttctgggaaatactggacactgacggcgacaggaggactgcagtgcact
gcctccaccaaatcagccaacagcttctttgaactggagtggcgtgatggtcgcgtgtgt
gtgcgtgcggctaacggcaagtatgtgatcgccaagaggaacgggcagctgtctgcttct
atcgacaacgcagctgaagccgaacagttcctgatgaaactgatcaaccggccgatcatc
gtcctccgtggggagcacggttttatcggggcccgtaaagccggaatggcgacgctggac
tctaaccgcgcctcctacgatgttttccagctggagttccacaacggagcgtactccctt
aaagactctcaggggaagtactggtgcgttggagacgacacggcggtggcgtgcagcagc
tccacacctgtccagttcctgtttgagttctgcgacctcaacaagatggccatccgcgtg
ctgggggggaagtacctgaaaggagaccacgctggggggctgaaggccagcgtggactcc
ctggacagcgccaccctctgggagtactga
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