Hippoglossus stenolepis (Pacific halibut): 118122977
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Entry
118122977 CDS
T08308
Symbol
gtpbp1
Name
(RefSeq) GTP-binding protein 1 isoform X1
KO
K24887
GTP-binding protein 1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsp03019
]
118122977 (gtpbp1)
03016 Transfer RNA biogenesis [BR:
hsp03016
]
118122977 (gtpbp1)
03012 Translation factors [BR:
hsp03012
]
118122977 (gtpbp1)
Messenger RNA biogenesis [BR:
hsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
118122977 (gtpbp1)
Transfer RNA biogenesis [BR:
hsp03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
118122977 (gtpbp1)
Translation factors [BR:
hsp03012
]
Eukaryotic type
Elongation factors
Elongation associated factors
118122977 (gtpbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP_EFTU_D2
GTP-eEF1A_C
MMR_HSR1
Dynamin_N
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
118122977
NCBI-ProteinID:
XP_035035855
LinkDB
All DBs
Position
16:complement(6619432..6627523)
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AA seq
682 aa
AA seq
DB search
MASLAAAEEPGASPVYIPLADALAPESIFAPDRGGCGEDAGDESFEDEDLINGVPEDRGV
DFTNKQALVSPNGEQYDSLLRQLRDRMEEGCGETIYVVGMGSDGGDWGLDEKDMEASVAT
VHSMCEQLDADLIPLRERNEAAGLVHDYLIRRRVGELDFLEVRVAVVGNVDAGKSTLLGV
LTHGELDNGRGFARQKLFRHKHEMESGRTSSVGNDILGFDQEGQVVNKPDSHGGSLDWTK
ICEKSSKVITFIDLAGHEKYLKTTVFGMTGHLPDFCMLMVGSNAGIVGMTKEHLGLALAL
NVPVFVVVTKIDMCPANILQETLKLLQRLLKSPGCRKIPVLVQNKDDVIVTASNFSSERM
CPIFQISNVSGENMDLLKMFLNLLSSRTSYRDDQPAEFQIDDTYSVPGVGTVVSGTTLRG
LIRLNDTMLLGPDPLGSFIPIAVKSIHRKRMPVKEVRGGQTASFALKKIKRSSIRKGMVM
VSPRLSPQATWEFEAEILVLHHPTTISPRYQAMVHCGSIRQTATILSMNRDCLRTGDKAS
VHFRFIKTPEYLHCDQRLVFREGRTKAVGTITKLLQSTNNLPSNSKPPQIKMQSTKKVPL
RKEDGTPVAGDDVATIAQPAGPNTTQSGEGEEDPQIKEGNKENKPKSGGGGRRRGGQRHK
GKGQNSSANPTAAPSSSGTGGC
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgctagctgcggcggaggagcccggtgcgagcccggtctacatcccgctggcg
gacgctctggccccggagagtatattcgccccggaccggggaggctgcggggaggacgcc
ggggacgagagctttgaggacgaggacctgatcaacggcgtgcccgaggaccgcggggtt
gacttcaccaacaagcaggctcttgttagccccaatggagagcagtatgactcgttactg
cgccagctacgggacaggatggaggagggatgcggagagaccatctacgtggtcgggatg
ggctcagatggtggtgactggggtctggatgagaaagatatggaggcctctgtggccaca
gtgcactcgatgtgtgagcaactggacgccgacctcattccactccgagagcgcaatgag
gccgcaggtttggtgcacgactatctgatccgcaggcgtgtgggtgagctggacttcctg
gaggtcagggttgcagtggtggggaacgtggatgctggcaagagtactctccttggggtg
ttgacgcatggagagctggacaacggcaggggctttgcccgccagaagctcttcaggcac
aagcacgagatggagagtggcaggaccagcagtgtgggcaacgatatcctgggctttgac
caggagggacaggtggtgaacaaaccagacagtcacggaggaagcctggactggaccaaa
atctgtgagaagtcctcaaaggtcataaccttcatagacttggccggccacgagaaatac
ctcaagactactgtgtttgggatgactggacacctgcccgacttctgcatgctcatggtg
ggcagtaacgcaggtatcgtagggatgaccaaagagcacctgggcctggccctcgctctg
aatgtgcccgtgtttgtggtggtaaccaagatagacatgtgtccagccaacatcctacaa
gaaacactgaagctgctccagaggttactgaagtctcccggttgtaggaagatcccggtc
ctggtgcagaacaaggatgacgtcatagtcacagcatcaaacttcagctctgagaggatg
tgtcccatctttcagatttccaatgtgagcggagagaacatggacctgctcaagatgttc
ctcaacctgctctcctccaggacttcctaccgagacgatcagcctgcagagttccagata
gacgacacctactctgtgccgggagtgggcaccgtagtatcaggaactactttacgtgga
ctcatacgcctgaatgataccatgctcctggggccggaccccctgggcagtttcatcccc
atcgccgtcaaatcaatccaccgcaagagaatgcccgtgaaggaggtccgaggtggccag
accgcctcctttgctctcaaaaagatcaagcgttcatccataaggaaagggatggtgatg
gtgtccccgaggttgagcccacaggccacttgggagtttgaggccgagatcctggtgctg
catcaccccaccacgatatcccccagataccaggccatggtccactgtggcagcataagg
cagaccgccaccatcttgtccatgaacagggactgcttacgaacaggggacaaggcttcc
gtccactttcgcttcatcaagacgcccgagtatctgcactgtgaccagaggctggtcttc
agagagggtcgcaccaaggctgtggggaccatcactaagcttttgcaatccaccaacaac
ttgccgtcaaattccaaaccgccacaaatcaaaatgcagtctacaaaaaaggtgccgctc
cgaaaagaggacggcaccccggtggccggcgatgacgtagcgacgatagcacagccagcg
ggaccgaacactacacaatcaggagagggagaggaagaccctcagataaaggagggcaac
aaagagaacaagccaaagtctggaggaggcgggaggcgacgggggggccagaggcacaag
ggaaaaggccagaacagcagcgccaacccgacagcagctccgtcctcatcggggacggga
ggctgctga
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