Hippoglossus stenolepis (Pacific halibut): 118123019
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Entry
118123019 CDS
T08308
Symbol
alyref
Name
(RefSeq) THO complex subunit 4 isoform X1
KO
K12881
THO complex subunit 4
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03013
Nucleocytoplasmic transport
hsp03015
mRNA surveillance pathway
hsp03040
Spliceosome
hsp05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118123019 (alyref)
09122 Translation
03013 Nucleocytoplasmic transport
118123019 (alyref)
03015 mRNA surveillance pathway
118123019 (alyref)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
118123019 (alyref)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsp03019
]
118123019 (alyref)
03041 Spliceosome [BR:
hsp03041
]
118123019 (alyref)
Messenger RNA biogenesis [BR:
hsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
118123019 (alyref)
TREX complex
118123019 (alyref)
Spliceosome [BR:
hsp03041
]
Complex C
Other components
EJC/TREX
118123019 (alyref)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
118123019 (alyref)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Motif
Other DBs
NCBI-GeneID:
118123019
NCBI-ProteinID:
XP_035035962
LinkDB
All DBs
Position
16:5644228..5647245
Genome browser
AA seq
277 aa
AA seq
DB search
MADKMDMSLDDIIKQNRQQRGGGRGGGGRGRGRGGSGGGRGAGGAGRVGMSSGGGGGFGG
RGGGSGPTRNRQNLSRARGRATPYNRPKQLPDKWQHDMFDNGFSGFNGAAGGGGGGGVET
GGKLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERRADALKAMK
QYNGIPLDGRPMNIQLVTSQIDTQRRPVQGLNRGGGGGMNRNRGGSFGGMQRGRGGRGAG
GPRGRGRGGRGGNTKQPMSAEELDAQLDAYNARMDTT
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggccgataagatggatatgtctctagacgacattatcaagcagaacaggcagcaaaga
ggcggaggccgcggcggcggcggaagaggccgaggccgcggaggctccggcggcggccga
ggagcaggaggcgccggacgcgtcggaatgagcagcggtggcggcggaggatttggaggc
cgaggcggtggatccggccccacgaggaaccggcagaacctgagccgcgctagaggcaga
gcaacgccttacaacaggccaaaacagcttccagataagtggcagcacgacatgttcgac
aacggcttcagcggcttcaatggtgctgctggaggtggcggaggaggtggcgtggaaact
ggagggaagctcctcgtctccaatctcgactttggggtctcagatgcagacattcaggaa
ctctttgctgaatttggaactctgaagaaggcggcggttcattatgaccgatcagggaga
agtctgggaactgcagatgtccactttgaaaggagagcggacgcactcaaggccatgaag
cagtacaatggcatcccactcgacgggcggcccatgaacatccaactcgtcacatcacag
atcgacacacagagaagacctgtacagggtctgaacagaggtggcggaggaggcatgaac
agaaatcgagggggcagcttcggcggcatgcagagaggtcgaggaggccgtggtgcaggc
ggtcccagaggacggggtcgaggaggacggggtggaaacactaagcagccgatgtcagca
gaggaactcgacgcccaattagacgcctacaatgccaggatggacacgacataa
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