Hippoglossus stenolepis (Pacific halibut): 118123040
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Entry
118123040 CDS
T08308
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17 isoform X1
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsp03041
]
118123040
Enzymes [BR:
hsp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
118123040
Spliceosome [BR:
hsp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
118123040
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
118123040
NCBI-ProteinID:
XP_035035996
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Position
16:complement(3432715..3440376)
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AA seq
637 aa
AA seq
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MRGSCGDRDRDRGRDRGSPRFGSSRGGPPPGKKFGNPGDRLRKKRWDLEELPKFEKNFYN
EHPEVQRMSQYDLEEFRRKKEITIRGSGCPKPVSTFHQAHFPQYVMDVLMQQNFKEPTAI
QAQGFPLALSGRDMVGIAQTGSGKTLSYLLPAIVHISHQPYLERGDGPICLVLAPTRELA
QQVQQVAHDYGKSSRIKTTCVYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLQ
RCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKDVRQLAEDFLKDYVQI
NVGALELSANHNILQIVDVCMENEKDQKLIQLMEEIMAEKENKTIIFVETKKRCDDLTRR
MRRDGWPAMCIHGDKSQPERDWVLTEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPN
SSEDYIHRIGRTARSTNKGTAYTFFTPGNLRQARELIRVLEEARQAINPKLLQMVDTGRG
GGGGGGRLRFRATSNSNNPNLMYQDECEQRMRSVSGGGGGGSKESRSSSSNYSRDNRDSR
SGSGRDGDRSSSSSSSSYRDRSSRDGGRSSSSNSYDQNNNNSSSRNASGSGDSPTPSSAP
KPLMAQQFNPPQPIMGLMGHSPFQFAPPPPPPTPGRK
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgagaggctcgtgcggggacagagaccgagaccgcggccgcgacaggggcagccctcgt
ttcgggtccagcagaggtggcccaccgccgggtaagaagtttgggaaccccggggaccgt
ctacggaagaagaggtgggacctggaggagcttcccaaatttgagaagaacttctacaat
gagcaccctgaagtgcagcgaatgagccagtatgatcttgaggagttccgcaggaagaaa
gaaatcaccattcgaggttcaggctgcccgaagcctgtctccaccttccaccaggcgcat
tttccccagtacgtaatggatgtgctgatgcagcagaacttcaaggagcccacagccatt
caggcacaaggtttcccactggcccttagtgggagagacatggtgggcattgctcagacc
ggctctgggaagaccttatcgtatcttctgcctgcaattgtgcacatcagccatcagccc
tacttggagcgaggagatggacccatttgtttggttctggcccccacaagagaactggca
cagcaggtccagcaggtggcacatgactatggaaagtcatcacgcatcaaaaccacttgt
gtgtatgggggggctcccaagggacctcaaatccgtgacctggagagaggtgttgagatc
tgcatcgccactccgggtcgtttgattgacttcctcgaggctggaaagaccaatctgcag
cgctgcacatatctagttctggatgaagctgaccgcatgctggacatgggctttgaacca
cagatccgcaaaattgtggatcagattcggccggacagacagaccctcatgtggagtgct
acctggcccaaagacgttcgccagctggcagaggacttcctcaaagactatgtccagatt
aacgttggagcgctggagctcagcgccaaccacaacatcctgcagatagttgatgtctgt
atggagaatgagaaggaccagaagttgatccaactgatggaggaaatcatggctgagaaa
gagaacaagaccatcatatttgtggagaccaagaagagatgtgatgacctcacacgcaga
atgagacgtgatgggtggccagcgatgtgtattcatggcgacaagagccaaccagagaga
gactgggtgttgacagagtttcgaagcggcaaagctcccatcctcatcgccactgatgtg
gcctcacgtggtttggatgtggaggatgtcaagtttgtcatcaattatgattatcccaac
tcatcggaggactacatccatcgcatcggccgaacagcgcgcagcaccaacaaaggcacc
gcctacaccttcttcactccagggaacctccgccaggcccgagagctgatccgggtgctg
gaggaggcccgacaggccatcaatcccaaactgctgcagatggtggacactggacgtgga
ggaggcggcggaggtggccgtctccgtttccgtgccacctccaattctaacaatcccaac
ctgatgtaccaggacgagtgtgagcagagaatgcgttctgtaagtggcggcggcggcggc
ggctccaaggaaagtcgcagcagcagcagcaactacagtcgcgacaatcgagacagtcgc
agtggaagcggccgggacggggaccgctcttcctcctcctcctcctcctcatacagagat
cgcagcagcagggatggaggacgcagctccagctccaactcatatgaccagaacaacaac
aacagcagctccaggaacgcctctggctcaggggacagccccactccatcatcggctccc
aagcctctgatggcccagcagttcaaccctccccagcccatcatgggcctgatggggcac
tcgcctttccagtttgctcctccacctccccctcctacaccaggtagaaagtaa
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