Hippoglossus stenolepis (Pacific halibut): 118123072
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Entry
118123072 CDS
T08308
Symbol
cldnk
Name
(RefSeq) claudin k
KO
K06087
claudin
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03272
Virion - Hepatitis viruses
hsp04382
Cornified envelope formation
hsp04514
Cell adhesion molecule (CAM) interaction
hsp04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
118123072 (cldnk)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
118123072 (cldnk)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
118123072 (cldnk)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
118123072 (cldnk)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
hsp03037
]
118123072 (cldnk)
04147 Exosome [BR:
hsp04147
]
118123072 (cldnk)
Cilium and associated proteins [BR:
hsp03037
]
Other cilia and associated proteins
Stereociliary proteins
118123072 (cldnk)
Exosome [BR:
hsp04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
118123072 (cldnk)
Exosomal proteins of colorectal cancer cells
118123072 (cldnk)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Clc-like
Motif
Other DBs
NCBI-GeneID:
118123072
NCBI-ProteinID:
XP_035036077
LinkDB
All DBs
Position
16:10921894..10922817
Genome browser
AA seq
215 aa
AA seq
DB search
MATTGMQLLGLIMSIVGWVSGAIVCSLPLWRVTAFIGNNIVTAQIIWEGLWMTCIVQSTG
QIQCKVYDSLLALPSDMQAARGLTVFSVLLCGLALSLGVLGVKCTKCVGVNSLKARIARI
SGVLFAVAGFLYLVPVCWTAHSIIRDFYDPHVAAPHKRELGPALYIGWGASALLLIGGSL
LYAGSSPPGLPGSPTFSSGESSPRRAPASQVKGYV
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaacaggcatgcagttgctgggcctgatcatgtccattgtgggctgggtgagt
ggggcgatagtctgttccctccccctgtggagggtcactgccttcatcggtaacaacata
gtgacggctcagatcatttgggaaggcctctggatgacttgcattgtgcagagcacaggt
cagatccagtgtaaggtgtacgacagcttgctggctctgcccagtgacatgcaggcggcc
cggggtctcactgtcttctccgtcctgctctgtggcctggctctgtctctgggggtccta
ggagtcaagtgcactaagtgcgtcggtgtaaacagcctcaaagcccgcattgcccgcatc
tctggagtcctctttgccgtcgcagggttcctctaccttgtgcccgtctgctggactgct
cactccatcatcagggatttctacgacccacatgtagcagctccacacaagcgagagctt
ggccctgccctttacattggctggggggcctcagccttgctcctcattggaggttctctg
ctgtatgccgggtcaagtccccctggtctcccaggctctcccactttcagcagtggagaa
agtagtccccgcagggcacctgcctcacaagttaaaggttacgtctaa
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integrated database retrieval system
