Hippoglossus stenolepis (Pacific halibut): 118123161
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Entry
118123161 CDS
T08308
Symbol
srebf2
Name
(RefSeq) sterol regulatory element-binding protein 2 isoform X1
KO
K09107
sterol regulatory element-binding transcription factor 2
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hsp03000
]
118123161 (srebf2)
04131 Membrane trafficking [BR:
hsp04131
]
118123161 (srebf2)
Transcription factors [BR:
hsp03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
118123161 (srebf2)
Membrane trafficking [BR:
hsp04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
118123161 (srebf2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
118123161
NCBI-ProteinID:
XP_035036237
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Position
16:complement(3296868..3312201)
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AA seq
1217 aa
AA seq
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MDTGEYMETMDTTLAELGDEFTLGDIDEMLQFVSNQVGDFPDLFEDQMNPTGSLPSGRAS
VTPRPTIQTPQAPPTPQTPTPVTYLNSSVTLTSPQTLSPQSLPLTPPLTPAQTPSPIPAS
SVQQQVTRSPPLLQPRPQVVQPIQPQPQQTAQPTIQVSTIIPLARETWMHTQGIPMQTQS
FPVHTLVQTQCQTPIQTQAGQTVMIAPNGGQSRFIQSPVICHQTSTPGFQVIQPQMQSIM
TSPQLQPLTIQHQRLLTPTGQTIQTLSAAPTTVHTMQQQVQQVLVQQPQILKTDSLVLTT
LKPDGTQVLSTMQSPNGITTLTTPLQNTLQVPQVNNTRDLIGCFLSANSTLMSSNILTTV
PMVMGGGDKLPIKQLQPGSSHCTNVARSNMDHGFMNMGVLGPGGVVKEGERRTTHNIIEK
RYRSSINDKILELRDLVMGNDAKMHKSGVLRKAIDYIKYLQQVNHKLRQENLAFKMGNQK
NKPVTLSEDVDLKQEIVMMSPPASDSGSGSPEQFSPYCVDSEPGSPLLDHDKVKSEPDSP
STVGVMDRSRLLLCALTFFCLSLNPLPSLLGSEASGSHGLSAGHGPSRTLVWFPTHTQDF
ASWLRCLLPWVMVWVLSGVGAVWGCVRVLYLWEPVTLLHSPKSVSFWRHRKQADLHLNRG
DFTAALVSLETCLAVLTRALPSTNLDLVCSLSWNLIRYCLHRPTPLGWLVHQVRGKHEGE
EARTSAKDAALVYHRLSQLQLTGKLPQRSSLWALSFSLSAVNLSESAQGKMAPAQLTQIY
VTAATALRTLLGHHLSFLPGYLLSCAESVASHSDTKPIPDCLRWLFTPLGRQFFLSCDWS
VKSECSDSVYTSQRDSVDPIAQLHRCFCRKLLERAVHTLIQPQSDSDAGKRKNDSGEFSS
AMEFLQLLNSCTEDSPSPPPPFSTPPNHTTTPVGDPVSRWWALVLKAAVHWLQGDDVAVR
SLLAEAERMPRALHTLDHSLPKAVLQLCKAVQMSLLPLKGEGAVACLSHCDRASSHLRAS
ISEPLAQSGNWLNKVEIKEAATSTVVTDITGVELLVCDLLLTLRTSLWQRGGSSNGEPGP
APGSQLAGFQRDLSALRKLTQCYRQAQHKVFLHETTVRLMAGASPTRTHQLLEHNLRRRT
HNSYTAGECVLGERERAHAILLACRHLPMPLLTPPGHRARLLAEAKRTLERVGDRRSLQD
CQQILLRLSGGTTIAAS
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atggacaccggggagtacatggagaccatggacaccacgttagcggagttaggggacgag
ttcacgttgggggacatcgacgagatgctgcagtttgtcagcaaccaagtgggggacttc
ccagacttgtttgaggaccagatgaacccaacaggctcgctaccgagcggcagggccagc
gtcaccccgcgtcccaccattcaaacccctcaagcgcccccaaccccccagacaccaacc
ccagttacctacctgaactccagcgttaccctcaccagcccacagacactatctccccag
tcgttacccctcacccctcccctcacccccgcccagaccccctcccctatccccgcctcc
tctgtgcagcagcaggtgacccgcagccctccgctccttcagcctcggcctcaggtggtc
caacccatccagcctcagccccaacagacggctcagcctaccatccaggtatcaactatc
ataccacttgcacgcgagacttggatgcacacccaggggatcccgatgcagacccagagc
ttcccggtccacaccttagttcagactcaatgccagacgcccatccagacccaggcgggg
caaactgtgatgattgcccccaacggtgggcagtcgcgtttcatccagagccctgtgatc
tgccaccagacttctactcctggtttccaagtcatccaaccacagatgcagagcatcatg
acgtcaccacagctccaaccattgaccattcagcatcagcgtcttctgactccaacaggt
caaaccatccaaactctctctgcagcaccgaccacagtccacactatgcagcagcaggtg
cagcaggttctggtccagcagcctcagattctgaaaacagattcgctggttctcacaact
ctcaaaccagatggcactcaggtgctgtcgaccatgcagagccccaatgggatcaccacc
ttgaccacgcccctccagaacactctgcaagtcccgcaagtaaacaatacaagggatctg
attggctgctttctgtccgccaacagcacgctgatgagcagcaacatcctgaccaccgtc
cctatggtgatgggcggaggagacaagctgccaatcaagcagctgcagccaggctcctcc
cactgcacaaatgtagccagatcaaatatggatcacggcttcatgaacatgggagtactg
ggcccgggaggagtggtgaaggagggcgagaggaggacgacacacaacatcatcgagaag
aggtaccgctcctccatcaatgacaaaatcctggagcttagggacctggtcatgggcaac
gacgctaagatgcataaatcaggagtgctcaggaaggccatcgactacatcaaatacttg
caacaggtcaaccacaaactacgacaggagaacctggcctttaaaatgggaaaccagaag
aacaagccagtgacgctgtctgaggatgtggacctcaaacaggaaatagtgatgatgtca
cctccagcctcggactctggctccggttcccctgagcagttctctccgtactgtgttgac
tcggagcccggcagtcccttactggatcacgacaaggtgaagagtgagccagattctccg
tccaccgtcggagtgatggatcgttctcgactgcttctctgtgccctcaccttcttctgc
ctgtcactgaacccgctgccctctcttctgggctctgaggcctcagggagccacggcctc
tctgccggccacgggccatcgagaacactcgtctggttcccaacacacacacaggacttc
gcgtcctggctgcggtgcctgttgccatgggtgatggtgtgggtgctgagtggcgtggga
gctgtgtggggctgtgtcagggtgctctacctgtgggagcccgtcacactccttcactcc
ccgaagtctgtgtccttctggaggcatcgcaaacaagccgacctgcatctcaacagggga
gatttcacagcagcattggttagtttagagacctgcttggccgtcttgacccgggctctt
ccctccaccaatctggatctggtctgctcgctgtcctggaatcttattcgctactgcctg
catcgtccaactcctctgggatggctggttcaccaggtcagaggaaagcacgagggagag
gaggctcggacgagtgcgaaggacgcggctctggtttaccaccgtctgagtcagctgcag
ctcacaggaaagttgcctcagcgaagcagcctgtgggctttgtctttctctctcagcgct
gtcaacctcagcgagagcgcccaaggcaagatggcccctgctcagctcacccagatctac
gtgactgcagcaacggccctgcgcacactgctgggccaccacctctcctttttgcctggt
tacctgctgagctgtgctgagagtgtggccagtcactcagacaccaagccgatccccgac
tgcctccgctggctcttcaccccattgggcaggcagttcttcctgagctgtgattggtca
gtgaagtctgagtgcagcgacagcgtgtacacttctcagagagattcggtcgaccccatc
gcccagctgcaccgctgtttctgcaggaagcttctggagcgagctgttcacacgctcatt
cagccgcagagcgactccgacgcaggcaaacgcaagaatgactctggggagttttccagt
gctatggagttcctccagttgttgaacagctgtacggaggactctccttcccctcctcct
cccttctcgactcctcccaatcacaccaccacaccagtgggagacccggtgagtcgctgg
tgggccttggtgctgaaggctgcggtgcactggctgcagggtgacgacgtggccgtgagg
tcactgctggccgaggccgagcgaatgccgagggctctgcacactctcgaccactctctt
cccaaggccgtgctgcagctctgcaaagcggttcagatgagtctgttgcctctgaaggga
gaaggagcagtggcctgtctgtcccactgtgacagagccagcagccacctgcgcgccagc
atctccgaaccactcgcccagtcgggcaactggctgaacaaggtagaaatcaaagaagct
gccacaagcaccgtcgtcactgacatcaccggggtggagctcctggtgtgcgacctcctg
ctgaccttgaggaccagtttgtggcagcgagggggcagcagcaacggagagcccggcccg
gcccctggatctcagttggctggttttcagagggacctcagcgcgctcaggaagctcaca
cagtgctacaggcaggcgcaacacaaggtgtttctccacgagaccacagtgaggctaatg
gccggtgccagtcccacaaggacacaccagctgctggagcacaacctccgacgcaggaca
cacaactcctacacagccggtgagtgtgtcctgggcgagagggagagggcccacgccatc
ctgctggcctgccgccacctgcccatgcccctgctaactccgcccgggcaccgcgcccgc
ctgctcgccgaggccaagcgcaccctggagcgggtgggagaccgccggtccctgcaggac
tgtcagcagatcttgctgcgcctcagcgggggcacgaccatcgcagcctcctga
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