Hippoglossus stenolepis (Pacific halibut): 118123200
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Entry
118123200 CDS
T08308
Symbol
wipi1
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1 isoform X1
KO
K17908
autophagy-related protein 18
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04136
Autophagy - other
hsp04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
118123200 (wipi1)
04136 Autophagy - other
118123200 (wipi1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118123200 (wipi1)
03029 Mitochondrial biogenesis [BR:
hsp03029
]
118123200 (wipi1)
Membrane trafficking [BR:
hsp04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
118123200 (wipi1)
Mitochondrial biogenesis [BR:
hsp03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
118123200 (wipi1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40
ANAPC4_WD40
BCAS3_WD40
Motif
Other DBs
NCBI-GeneID:
118123200
NCBI-ProteinID:
XP_035036311
LinkDB
All DBs
Position
16:21416194..21441024
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AA seq
457 aa
AA seq
DB search
METAEGAAGPGGPDGPGLRFGCASFNQDSTSLALGTKIGYKLFSLTMVEKLDCIHESVET
PDVYIVERLFSSSLVVVVSIAMPQRMNIYHFKKGTEICNYSYPNNILSVKLNRQRLVVCL
EESIYIHNIKDMKLLKTLLNTPSNPSGLCALSINHTNSYLAYPGSATIGEIIVYDANNLN
TVTMIPAHDSPVAALTFNASATKLASASERGTVIRVFSVPEGLRLFEFRRGMKRYVSIRS
LSFSPDGQFLCASSNTETVHIFKMEQLGHSGGDEAATWTAYMGKMFSAASSYLPAQVSGM
MSQDRAFATVHLLLSDQSNICTLAMIQKLPRLLVATANGHLFIYNVDPVDGGECMLAHKH
RLFGSDDDQGEGTESEGSEVTGPAQACPSYAATAALPASGPVTATLTGYSEDGGAKKGEV
IPEHEFAAGPVCLDDENEFPPINWCRDGTGGGPGRRS
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggagaccgcggagggagctgctgggcctggtggaccggacggacccgggctccggttt
ggctgcgcctctttcaaccaggactccacgtcactggctttgggaacaaagattggctac
aaactgttttctctgaccatggtggaaaaactggactgcatccatgagagtgtagagact
ccagatgtctacatcgtggaacgtctcttctccagcagtctggtagtcgtggtgagcatc
gccatgccgcagcgaatgaacatctatcacttcaagaaggggacagagatctgcaactac
agttaccccaacaacatcctttctgtcaagctcaacagacagagactcgtggtgtgcctt
gaagagtccatttatatccacaacatcaaagacatgaagctgctcaagactctgcttaac
actccgtccaacccctcaggtctctgtgctctctctatcaatcataccaactcctacctg
gcgtaccctggcagtgccaccattggggagattatagtgtatgatgccaacaatttgaac
acagtgacaatgatcccagcacacgacagtcctgtggcagctctcaccttcaacgcctca
gccaccaaacttgccagtgcctcagagagaggcactgtcatccgagtgttctccgtcccc
gagggcttgcgtctgtttgagttccgccggggcatgaagaggtatgtcagtataaggtct
ttatcctttagccctgacggccagttcctctgtgcttccagcaacacagagacggtgcat
atctttaaaatggaacaactgggtcacagtggaggggacgaggctgccacttggacagcc
tacatggggaagatgttctcagcagccagcagctacctccctgctcaggtatctggcatg
atgagccaggaccgggccttcgctactgttcacctcctcttgtctgaccagagcaacatc
tgcaccttggctatgatccagaagcttccacggctgttggtggccacggccaacggccac
ttgttcatctataacgtggatccagtggacggaggggagtgcatgttagcccacaaacac
aggctctttggcagtgatgatgaccagggtgaaggaacagagtcagaggggtcagaggtc
acagggccagcacaggcctgtccttcctatgctgcgacagctgccttaccagcttctgga
cctgtcactgctaccctcactggctactctgaagatggtggggcaaagaaaggcgaagtc
attccagaacatgagtttgctgctggacctgtgtgtctggatgacgagaacgagtttcct
cctattaattggtgccgcgacgggactggaggtggcccggggaggcgctcgtaa
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