Hippoglossus stenolepis (Pacific halibut): 118123201
Help
Entry
118123201 CDS
T08308
Symbol
zgc:86896
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A-A
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04144
Endocytosis
hsp04517
IgSF CAM signaling
hsp04530
Tight junction
hsp04810
Regulation of actin cytoskeleton
hsp05100
Bacterial invasion of epithelial cells
hsp05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
118123201 (zgc:86896)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118123201 (zgc:86896)
09144 Cellular community - eukaryotes
04530 Tight junction
118123201 (zgc:86896)
09142 Cell motility
04810 Regulation of actin cytoskeleton
118123201 (zgc:86896)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
118123201 (zgc:86896)
05100 Bacterial invasion of epithelial cells
118123201 (zgc:86896)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118123201 (zgc:86896)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hsp04812
]
118123201 (zgc:86896)
Membrane trafficking [BR:
hsp04131
]
Others
Actin-binding proteins
Arp2/3 complex
118123201 (zgc:86896)
Cytoskeleton proteins [BR:
hsp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
118123201 (zgc:86896)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_Aladin
Beta-prop_WDR19_1st
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
WDR55
Beta-prop_IFT140_1st
EIF3I
Beta-prop_EML
Beta-prop_WDR3_2nd
Rax2
DUF2694
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
WD40_MABP1-WDR62_2nd
SH3_3
Motif
Other DBs
NCBI-GeneID:
118123201
NCBI-ProteinID:
XP_035036315
LinkDB
All DBs
Position
16:21406367..21414850
Genome browser
AA seq
356 aa
AA seq
DB search
MSLYSFGLEPISCHTWNKDRTQIAVSPNNNVVDIYERKGKDWIKIHELSEHSGHITGIDW
APESNRIVTCASDRNAYVWTLKDGVWKPTLVLVRINRAATCVKWSPLENKFALGSGARLI
SVCYFEKENDWWLSKHIKKALKSTVLSLDWHPNNILLAAGSADFHCRVFSAYIKDIEDKP
GPTAWGAKMPFGEVLLEHKDCGGWVHSVSFSPSGDQLAWVAHNSSISVADAAQKKEITLL
TTDRLPLTSVLFVSPTEMVAAGHNCCPYLFTYTGPGALEFVKKLDIPKQTSKGSMSAMQH
FRNLDMRATEDDSNELDTLHQNSITQLCIVSGEKARVEKYSSVGLDGAMVIWEFKH
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctctacagttttggcctggagccgatctcctgccacacctggaacaaagacagg
acccagattgcagtaagccctaacaacaacgtggtggacatctatgagaggaaaggcaaa
gactggatcaagattcatgagctcagtgagcacagtggacatattacaggcattgactgg
gcaccagagtccaaccgcattgtgacatgtgcctcggaccgcaacgcctatgtgtggact
ctgaaggatggtgtgtggaaacccacactggtgctggtgcgcatcaaccgagcagccacg
tgtgtgaagtggtcacctctggaaaacaagtttgccctgggcagcggagctcgtctcatc
tctgtctgctactttgagaaggaaaatgactggtggctgagtaagcacatcaaaaaggcc
cttaaatccacagtcctgagtctggactggcatcccaacaacatcctactggctgctggc
tctgcagactttcactgcagggttttctctgcctacatcaaggacatcgaggacaagcct
ggacccaccgcctggggcgccaagatgccttttggtgaggtcctgcttgagcataaggac
tgtggaggctgggtgcacagtgtctccttctccccaagcggagatcagctggcatgggtg
gcccacaacagtagcatcagtgtggctgatgctgcccagaagaaggagataaccctgctg
accactgaccgtttgcccctgacaagcgttctctttgtcagccccactgagatggttgct
gcgggtcataactgttgcccatacctgttcacctacactggtcctggtgccctggagttt
gtgaagaagctggacatccccaagcagacgtctaagggcagcatgtcagcgatgcaacac
ttccgcaacctggacatgagggcgactgaggacgacagcaacgagctagacacccttcat
cagaacagcatcacgcagctgtgtattgtatcaggggagaaagccagagtggagaagtac
agtagtgtgggtctggatggagccatggtgatctgggaatttaagcattga
DBGET
integrated database retrieval system
