Hippoglossus stenolepis (Pacific halibut): 118123257
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Entry
118123257 CDS
T08308
Symbol
ppl
Name
(RefSeq) periplakin
KO
K10386
periplakin
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
118123257 (ppl)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hsp04812
]
118123257 (ppl)
Cytoskeleton proteins [BR:
hsp04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
118123257 (ppl)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Plectin_PPL
SR_desmoplakin_3
Spectrin_1st_PEPL
SH3_10
Plectin
SR_plectin_7
Spectrin
Motif
Other DBs
NCBI-GeneID:
118123257
NCBI-ProteinID:
XP_035036456
LinkDB
All DBs
Position
16:complement(21570288..21588835)
Genome browser
AA seq
1752 aa
AA seq
DB search
MFKKKKSVITQPKPTAPSTELSALIEKLQRNADKVEKNIYDVEQNLNKDVSKINEGKQPL
YQDDTNKRILNSLELLIGLDEDAVNAKRLQHPQAEMIEQDMRQLRERVMKLREDHDRIYH
LVRTEGMPSINWGNMMDEKMDNLKNKGFGQDLPSVENEVEEHNIFHSEVEALAPHLSTCG
DKEYISGLQTKYSKLLASSSARQRNLLSLRDYMQRCTNELYWMDQQADERINYDWSDANL
DYPARQRQYENFISKCLESKEATVTKLNDDGEKLMAADHPGKNVIEAHTEAVHADWKEYL
NLLICEENHLKHMDEYHKFQKESRDTQDLLKRLDTEVNQKYNPEFKDVYQMEGLIRELDD
QSKAMDHFDERVKALQKRSQQVLPLKYRRETPQKLLPVEALCEFDTDEGQILRGERYTLL
RNNGAKWDVKDAAGRKVTAPAVCFMTPPTDPEAVAITDNLASQQKAVKQKMAGSKSTLLK
RYDVLKKDSGTDKEEQQCRQLMASLDKVVSDLDKQEKGIHARVRPPLEQNRPLQDSADRL
QDMRDIAAAVSKIEPEKSSKAQEAKSFLVSNPNCNSSPQLHSKVDEANNKYAKIEELLQC
SQEKLKNSNQLETSLQNGKTFLSTYENKLAREEVAPADLSSLDKTQRELADIGSDLRSKR
SVVSDTEQNLRLAKGSCDNMATKFQEHCPDIERQEGDVQKLNKRFNNLNRQIDTRSQSLQ
RSKMAYNNYRNDYDNLNSWLSRVPNYEAKESDDTTQLETKLKNQRNLLSDIARKESDLNN
ISKNAQLYQQAVKDYEIETEKFRSILDLEDGLVPQTYKRSRLESPANTVKAEEAAIESKF
TEVNAVNSQRLQNLEFADSLLKQQPEIHMIQPTNVKSVHAAQGEEPWRIKKQLDDEVQRR
EQLEKEIEIMQTDIYVLEGQRPQDTIVKKELIKKVPDPQLDEEIHKVQQKLSEERRTTHV
FENDLEVLKLKLRGFETEVKEGAQQYTVKEVLRIERDRGQEEEVRKLREDLDELRRQKLL
KDNDLISFQKQVTLLAEEKSREQEVIIEEEVIKVQNDPQLETEYRFLLDRRQKETDGRTQ
LEDELKFLQEKLRRLEKEKAMAEEKISIKEVVKVEKDVTFEREVENIRRQYEDEKTKRRS
SQREKADMQRKITSLEEEKSKVVIQEKVREIVRPDPKAENEVANLRLELVEHQRRYKDAE
LHLRSLQDELNMLRNRGPQVEIKELIKEVIKYKTDPQTERELERLRNEIVDKTHETEKSE
MEIRQLNDEIQRWKNTKPQVQTREVVNEVLQYREDPKTKEEIETLKRKLADEQKKRLDLE
AERSNQEDKIRLRKIDLSQVREKIVQHEVVKMEEDPLLRSECDTFSHNINNEQRQKESLK
TELYQLQRKKTDLDLQLEELERERKARRDAELEIQRLRIRLNELELRDKENREKVTVKQK
VVLQQDPQQEKEHSILRLQLDEEKHKRTLLEKELNALIQQQITLEKIDVKERVVRTEKVQ
VERDPEAEIEIENLKRTLEEEKRRRRELDQEMSTLTSRLSDMEFSNTKSTKELDYIRDES
NRVQQENQRLQNEIRKLRSEIEITSKETRLITESAPREDGKNLELRLDSLQRELTELRGV
TTIKDDEIERLQKNLAAVRMKREQRESHLRRSIVIIDPDSGKEMRPEEAFKLGLIDWKMF
VNLQSQECDWEEISVKGPKGESSVLHDRKSGQKFSIEDALRLGHITNQQVQQYINKEISI
QEFGVMVSGKTK
NT seq
5259 nt
NT seq
+upstream
nt +downstream
nt
atgtttaagaagaagaagtccgtcataacgcagccgaaaccaacggctccctccacagag
ctgagtgccctgatcgagaagctgcagaggaatgcagataaagtggagaagaacatctat
gatgtggagcagaacctcaacaaggatgtgagtaagatcaatgaggggaagcaaccgctc
tatcaggatgacaccaacaagagaatccttaactctctggagctgctcattggcttggac
gaggacgccgtgaacgccaaacgtctccagcatccacaggctgagatgatagagcaggac
atgaggcaactgcgggagagggtgatgaagctgagagaggaccatgaccgtatctaccac
ctggttcgcactgaggggatgcccagcatcaactggggcaacatgatggatgagaaaatg
gacaacctgaaaaacaagggctttggacaggacctgccatctgtggagaacgaggtggag
gaacacaacatcttccacagtgaggtggaggctctggctcctcacctctccacctgcggt
gacaaggaatacatcagtggcctccagacgaagtacagcaaactactggccagttccagc
gctcgtcagcgcaacctgctgagtctgcgggactacatgcagcgctgcaccaatgagctc
tactggatggaccaacaggcggatgagaggatcaactacgactggagcgacgccaacctc
gactaccccgcccgccagaggcagtatgagaacttcatcagcaaatgtctggagtccaag
gaggccaccgttaccaagctgaatgatgatggagagaagctgatggccgcggatcatcca
gggaaaaatgtcattgaggctcatacggaggcggtccatgctgactggaaggagtacctg
aacctgctcatctgtgaggaaaaccacctgaaacacatggacgagtaccacaagttccag
aaggagtctcgtgacactcaggacctgctgaagcggctggatacagaggttaaccagaag
tacaacccagagttcaaagatgtgtatcagatggaaggtctcatcagggagctggatgac
caatccaaggccatggaccactttgatgagcgggtcaaggctcttcagaagcgcagccag
caggtgttacctctgaagtaccgcagagaaacaccccagaagctgctgcccgttgaagct
ctgtgtgagtttgacacagatgaggggcagattttgcgtggggagaggtacactctgctc
cggaacaatggggccaaatgggatgtgaaggacgcagccggacgtaaagtcaccgcacca
gccgtctgcttcatgaccccccccactgaccctgaggctgtggccatcactgacaatctg
gccagccaacaaaaggctgtcaaacagaagatggcaggcagcaagtcaactctgctgaaa
cgctacgatgtgctgaagaaggacagtgggactgacaaggaggagcagcagtgccgccag
ctgatggccagtctagacaaggttgtcagtgacctggacaaacaggagaagggcattcat
gcccgagtgcgccctccgttggagcagaacaggccactgcaggacagcgctgaccgcttg
caggacatgagggacattgctgcagctgtcagtaagattgaaccagagaaatcctctaaa
gcacaggaggcaaaaagcttcttggtctccaacccgaattgtaacagttctcctcagctt
cacagcaaggtggatgaggccaacaacaagtacgccaagatcgaagagcttcttcagtgc
tctcaggagaaactgaagaattccaaccagctggagacgtcccttcagaatggaaagacg
tttctttctacctacgagaataagctggccagggaggaggttgctccagctgacctctcc
tcactggacaaaacacagcgggagcttgcagatattggctctgacctgaggtccaagagg
tcagtggtctctgacacagagcagaacctgcgcttggccaaaggcagctgtgacaacatg
gctaccaaattccaagagcactgccccgacattgagaggcaggaaggtgatgtccagaag
ctcaacaagcgcttcaacaacctcaacaggcagatcgacaccaggtctcaaagcttgcag
agatccaagatggcgtacaacaattatcgcaatgattatgacaatctgaacagttggctg
tctcgtgtcccaaactacgaggctaaagaaagtgatgacaccacacaattggagaccaaa
ctgaagaatcagaggaacttgctctctgatattgcaagaaaggagtctgacttgaacaac
atctccaaaaatgcccaactttaccaacaagctgtcaaagactacgagatcgaaacagag
aagttcagatctattcttgatctggaggatggacttgtgcctcagacatacaagaggagc
agattggaatcacctgcaaatacagtcaaggcagaggaagctgcaattgaatctaagttt
actgaggtaaatgctgtgaacagtcaaaggttgcagaatctggagtttgcagacagtctt
ctcaaacagcaacctgagattcacatgatccagccgacaaatgtcaagtcagttcatgct
gcccaaggagaggagccttggagaatcaagaagcagctggatgatgaggtccagaggaga
gagcagctagaaaaagaaattgagatcatgcagactgacatctatgtccttgaaggacag
aggccccaggatacaattgtcaaaaaggagctaattaaaaaggttcctgacccccaactg
gatgaggagattcataaagtccagcagaaactctcagaagaacgccgcactactcatgtc
tttgagaatgaccttgaagtgctgaagttaaagctgcgtggctttgagacagaggtaaaa
gaaggggcacagcaatacactgtgaaagaggtcctgcgaatagaaagagaccggggtcag
gaggaggaggtgcgcaagcttcgggaggacctggatgagttaagaaggcagaagttgctc
aaagacaatgatctgatatcgtttcaaaagcaggtgacacttctggctgaggagaagagc
agggaacaagaggtaataattgaagaagaggtgatcaaagttcagaatgacccccaactt
gaaacagaatatcgatttctccttgaccggaggcagaaggaaacagatggcaggacacag
ctggaggatgaactgaaatttcttcaggagaagctacgaaggctggagaaggagaaggca
atggcagaggagaagatttccatcaaggaggtggtgaaagtagagaaagatgttaccttt
gaaagggaggttgaaaacatcaggagacagtatgaagatgagaagaccaaaagaagatca
tcacagcgggaaaaggctgacatgcagaggaaaattaccagtctagaggaggaaaagtct
aaggttgttattcaggagaaagtgcgggagattgtccgtcctgaccccaaggctgagaat
gaggtggccaatctccggcttgaacttgtggagcatcagagacgctataaagatgcagag
ctccatcttagatccctgcaggatgagctgaacatgctgaggaacagagggcctcaagtg
gaaatcaaagagctcatcaaagaagtcatcaaatataagacagatccacagactgaaaga
gaactggagagacttcgcaatgaaattgttgataaaacccacgagactgagaaatctgag
atggaaatccgccagctgaacgatgaaattcaaagatggaagaacaccaaaccccaagta
cagacaagggaggtggtaaatgaagtgctgcagtacagagaagatcccaagaccaaggag
gagattgagactcttaaaaggaagctggctgatgaacagaagaaacgcctcgaccttgag
gcagaacgatcaaaccaagaagataagattagactgaggaaaatagatctttctcaggtt
cgcgagaagattgttcagcatgaagtggtcaagatggaagaagaccctctcctcagatca
gagtgcgacaccttctcacacaacatcaacaatgaacagagacaaaaggagagcctgaaa
acggagctctaccagctgcagagaaagaagactgacctggatctgcaattggaggaacta
gagcgcgagcgcaaggcgaggcgtgatgcagaattggagattcagaggcttcggatcaga
cttaatgaactggagctccgcgacaaggagaaccgtgagaaggtgacggtcaaacagaag
gtagtcctgcagcaggatccccagcaggaaaaggagcactccatcctcagactacagctt
gatgaagagaagcacaaacgcaccctgcttgagaaagagttaaatgccctcatccagcag
caaatcaccctggagaagattgacgtgaaggaaagagttgtccgcaccgagaaagtccaa
gttgaaagggacccagaagctgagattgagattgaaaacctgaagaggactctggaagaa
gagaaaaggagaagacgagaactcgaccaggagatgtccactctcacttccagactctca
gatatggagttctctaacaccaagtctactaaagaactggactacatccgtgatgaaagt
aaccgtgtgcagcaagaaaaccaaaggctgcagaatgagatacgcaagctccggtctgag
attgagattaccagtaaagagactcgacttattactgagtctgcaccaagggaagacgga
aagaacctggagttgaggcttgattcactgcagagagaactcacagaactcaggggcgta
accaccataaaggatgacgaaatcgaaaggctacaaaagaacctggcagcagtgagaatg
aagagggagcagagggagagccatctccgcaggtctattgtcatcattgatccagattca
ggaaaagagatgagaccagaggaggccttcaagctaggcctgatcgactggaagatgttt
gtcaacctgcagagccaggagtgtgactgggaggagatctcagtcaaaggtcctaagggg
gaatcctcagttcttcacgacagaaaatctgggcaaaagttctccatcgaagatgcgttg
cgtcttgggcacatcacaaatcaacaagttcagcagtacataaataaagaaatctctatc
caggagtttggtgtaatggtgtcgggcaagaccaagtaa
DBGET
integrated database retrieval system
