Hippoglossus stenolepis (Pacific halibut): 118123277
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Entry
118123277 CDS
T08308
Name
(RefSeq) keratin, type I cytoskeletal 13
KO
K07604
type I keratin, acidic
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
118123277
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hsp04812
]
118123277
04147 Exosome [BR:
hsp04147
]
118123277
Cytoskeleton proteins [BR:
hsp04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
118123277
Exosome [BR:
hsp04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
118123277
Exosomal proteins of other body fluids (saliva and urine)
118123277
Exosomal proteins of colorectal cancer cells
118123277
Exosomal proteins of melanoma cells
118123277
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
AIF-1
UPF0184
Motif
Other DBs
NCBI-GeneID:
118123277
NCBI-ProteinID:
XP_035036492
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Position
16:complement(482524..486880)
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AA seq
471 aa
AA seq
DB search
MSRYGGGSSSYSSSSRSVYGGAGGKQVRVSGGSSMSMYGSGGGGGGGGGGVSSGGYGFSY
GGGYGAGGGGGYGAGGGGGGGLGCGADNQGISANEKATMQNLNDRLASYLEKVRMLEQAN
AELELKIRQFLESKTSPSSRDYSAYYATIAELQGKIQQATKINGAIYLSIDNAKLAADDF
RLKYENELAMRQSVEADIAGLRRVLDELTMSRTDLEMQIEGLMEELIFLKKNHEEDLMAA
RTSMSGQVNVEVDAAPQEDLTKIMDEIREHYEAVAAKNRKELEAWFQSKTESLNQDIAVN
TETMQTSKSELTDLKRMLQSLEIELQSQLSMKAGLEATLSETQSRYSMKLMGYQNQVSML
EEQLVQLNTDMGRQSQEYQVLLDIKTRLEMEIAEYRRLLDGEGGGSGSGSGSGSGFGSGS
GSVSVSGSSSSSTTTTTSVTPKTITTKKVVTVIEETVDGQVVSSRETVSMA
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggtacggtggaggtagtagctcctacagtagcagcagtaggtctgtgtacggt
ggtgctggcggcaaacaggtccgagtctctggaggctcctccatgtccatgtatggcagt
ggcggcggcggcggcggcggcggcggtggtgtttctagtggtggctatggcttcagctat
ggaggaggctatggagcaggtggtggaggaggctatggagcaggcggtggaggaggcggt
ggacttggttgtggtgccgacaaccagggcatttctgccaacgagaaggccaccatgcag
aacctgaacgaccgcctggcctcctacctggagaaggtccgcatgctggagcaggccaac
gctgagctggagctgaagatcagacagttcctggagagcaagacctcgccgtcctcccga
gactacagcgcctactacgccaccatcgcagaactgcagggaaagatccagcaggcgacc
aaaatcaacggtgccatctacctgtccatcgacaacgccaagctggccgccgacgacttc
aggctcaagtacgagaacgagctggccatgcgtcagtcggtggaggctgacatcgccggg
ctgaggcgagtcctggacgagctgacgatgtccagaaccgacctggagatgcagatcgag
ggcctgatggaggagctaatcttcctcaagaagaaccacgaggaggatctgatggctgcg
agaacttcgatgagtggtcaggtgaacgtggaggtggacgccgctcctcaggaggacctc
accaagatcatggacgagatcagggagcactatgaggccgtcgccgccaagaaccgcaaa
gagctggaggcctggttccagtcgaagacagaatctctgaaccaagacatcgctgtcaac
acagagacgatgcagacgtccaagtccgagctcacagatctcaaacgaatgctgcagagt
ctggagatcgagctgcagtcgcagctcagcatgaaagccgggctggaggcaaccctgtct
gagacgcagagccgctactccatgaagctgatgggctaccagaaccaggtgagcatgttg
gaggagcagctggtgcagctgaataccgacatggggagacagtcccaggagtaccaggtg
ctgctggacatcaagaccagactggagatggagatcgccgagtacaggaggctgctggac
ggagagggcggcggcagtggctccggctccggctccggctccggcttcggctccggctcc
ggttccgtctcagtctctggctccagctccagcagcaccaccaccaccaccagcgttacc
cccaagaccatcaccactaagaaagtcgtcacagtcatcgaggagacggtggatgggcag
gtggtgagctccagagaaacagtcagcatggcctag
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