Hippoglossus stenolepis (Pacific halibut): 118123285
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Entry
118123285 CDS
T08308
Symbol
thoc6
Name
(RefSeq) THO complex subunit 6 homolog
KO
K13175
THO complex subunit 6
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03013
Nucleocytoplasmic transport
hsp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118123285 (thoc6)
09122 Translation
03013 Nucleocytoplasmic transport
118123285 (thoc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsp03019
]
118123285 (thoc6)
03041 Spliceosome [BR:
hsp03041
]
118123285 (thoc6)
Messenger RNA biogenesis [BR:
hsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
118123285 (thoc6)
Spliceosome [BR:
hsp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
118123285 (thoc6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_IFT122_1st
Beta-prop_WDR5
Beta-prop_THOC3
WD40
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_NOL10_N
Beta-prop_EML
WDR55
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
NBCH_WD40
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_ACSF4
Beta-prop_RIG_2nd
CFAP251_N
TRM82_WD
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_IP5PC_F
DSE1_N
Beta-prop_WDR41
Beta-prop_VPS8
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
Beta-prop_HPS5
WDR54
Beta-prop_NUP159_NUP214
Beta-prop_Vps41
WD40_like
RhsPI
Motif
Other DBs
NCBI-GeneID:
118123285
NCBI-ProteinID:
XP_035036501
LinkDB
All DBs
Position
16:complement(346232..351498)
Genome browser
AA seq
323 aa
AA seq
DB search
MGPVELLHMSVFSQSFSPCGRFLAAGNSYGEIALFSLSAALSPDATALSQKPVLTFTAHE
GPIFSLLSTDCFLLSTGNGEISAWSWTELIKKNVKPLWTKRPNYKSSLEIPEINSMMVQS
RDNSLVIGGGDNNVHILDLEHGVFKSVLQGHTDYVHCVSVREREAEILSGSEDGAVRIWD
SRTGQCVHCIEVYKYESCARPQFGKWISCLTTDSDWMLCGGGPSLSLWHLRSLSPTSIFP
LTGCQRQAAFHQDMILAVGDGACVSHCLLGGEVKAQIPCSLQSVNSLQLNANSSEHQVLT
VAGSSDHIDVFTNLSYRAFSLSF
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgggtccagtggagctcctccacatgtccgtcttctctcagagcttctccccctgcggc
cgcttcctggcggctggaaacagctacggtgagatcgccctcttcagtctgtctgcagct
ctgagtccagacgccacagcactgagtcagaaacctgttctgaccttcacagctcacgaa
ggtccgatcttctctcttctctccaccgactgtttcctattgagcaccggaaacggagaa
atcagcgcctggagctggactgaactcatcaagaagaacgtcaaacctctgtggacgaaa
agaccaaactacaagtccagtcttgagattcctgagatcaactcgatgatggttcagtcc
agagacaacagtctggtcatcggtggaggagacaacaatgtccacatcctggacctggaa
cacggagtcttcaagtctgtcctgcagggtcacacggactatgtccactgtgtgagtgtg
agggagcgggaggcggagatcctctcggggagtgaggacggagccgtgaggatctgggac
agcaggaccggacagtgtgtccactgcatcgaggtctacaagtacgagagctgtgcgcgg
cctcagttcgggaagtggatcagctgcttgaccaccgactctgactggatgctgtgtggt
ggaggtccgtctctgtctctgtggcacctccgctctctgtctcccacctccatcttccct
ctgacgggctgccagcgacaagccgccttccaccaggacatgatcctggcggtgggtgac
ggtgcgtgcgtgtctcactgtctgctggggggcgaagtcaaagctcagatcccgtgttct
ctacagagcgtcaactcgctgcagctcaacgccaacagctccgagcaccaagttctgaca
gtcgcaggaagcagtgaccacatcgacgtgttcaccaacctgtcgtaccgagcgttctca
ctcagcttctga
DBGET
integrated database retrieval system
