Hippoglossus stenolepis (Pacific halibut): 118123287
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Entry
118123287 CDS
T08308
Symbol
stx1b
Name
(RefSeq) syntaxin-1B
KO
K08486
syntaxin 1B/2/3
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
118123287 (stx1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118123287 (stx1b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hsp04147
]
118123287 (stx1b)
Membrane trafficking [BR:
hsp04131
]
SNARE
Syntaxin (Qa)
Stx-PM
118123287 (stx1b)
Exosome [BR:
hsp04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
118123287 (stx1b)
Exosomal proteins of other body fluids (saliva and urine)
118123287 (stx1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
AAA_13
Lzipper-MIP1
Relaxase_C
Spectrin_Anc-1
GNVR
VBS_C3G9
Baculo_PEP_C
DUF4658
DUF6842
TolA_bind_tri
ARM_ECM29
CAP_N
Motif
Other DBs
NCBI-GeneID:
118123287
NCBI-ProteinID:
XP_035036508
LinkDB
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Position
16:complement(370353..411973)
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AA seq
288 aa
AA seq
DB search
MKDRTAELRSAKDSDDDEEVVQVDRDHFMDEFFEQVEEIRGCIEKLSEDVEQVKKQHSAI
LAAPNPDEKTKQELEDLTADIKKTANKVRSKLKAIEQSIEQEEGLNRSSADLRIRKTQHS
TLSRKFVEVMTEYNTTQSKYRDRCKDRIQRQLEITGRTTTNEELEDMLESGKLAIFTDDI
KMDSQMTKQALNEIETRHTEIIKLENSIRELHDMFVDMAMLVESQGEMIDRIEYNVEHSV
DYVERAVSDTKKAVKYQSQARKKKIMIIICCVILGVVLASTIGGTLGF
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaccgtacggcggaactgcgaagtgcgaaggacagtgatgatgacgaggaggtg
gtgcaggtggacagggaccacttcatggatgagttctttgaacaggtggaggagatcaga
ggctgcatagaaaagctgtcggaggatgtggagcaggtgaagaagcagcacagcgccatc
ctggccgcacccaaccctgacgaaaagaccaagcaggagttggaggacctcacagctgac
atcaagaaaacagctaataaagttcgttcaaaattaaaagcgatcgagcagagcatcgag
caggaggagggtctcaacagatcatcggcggacctcaggatccgcaagacacagcactca
acgctgtcacgtaagtttgtggaggtgatgactgagtacaacaccacgcagtccaagtac
cgcgaccgctgcaaggaccgcatccagagacagctggagatcactgggagaaccaccacc
aatgaggagctggaggacatgttggagagcggcaagctggccatcttcaccgatgatatt
aaaatggactctcagatgacgaagcaggctctgaatgagatcgagacccgacacaccgag
atcatcaagctggaaaacagcatccgggagctgcacgacatgttcgtggatatggccatg
ctggtcgagagccagggagagatgattgacagaattgagtacaacgtggaacactccgtc
gactacgtggagcgagccgtgtctgacaccaagaaggccgtcaaataccagagccaggct
cgcaagaagaagatcatgatcatcatctgctgcgtcatcctgggcgtggtcctggcgtca
accatcggtggcacgctgggcttctaa
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