Hippoglossus stenolepis (Pacific halibut): 118123512
Help
Entry
118123512 CDS
T08308
Symbol
shmt1
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp00260
Glycine, serine and threonine metabolism
hsp00630
Glyoxylate and dicarboxylate metabolism
hsp00670
One carbon pool by folate
hsp01100
Metabolic pathways
hsp01200
Carbon metabolism
hsp01230
Biosynthesis of amino acids
hsp01240
Biosynthesis of cofactors
hsp04981
Folate transport and metabolism
Module
hsp_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
118123512 (shmt1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
118123512 (shmt1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
118123512 (shmt1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
118123512 (shmt1)
Enzymes [BR:
hsp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
118123512 (shmt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Nif11
Motif
Other DBs
NCBI-GeneID:
118123512
NCBI-ProteinID:
XP_035036842
LinkDB
All DBs
Position
16:3712529..3717909
Genome browser
AA seq
482 aa
AA seq
DB search
MSATNGHGVSKETWESHNKMMLEPLGINDSEVFSIIKKEKHRQTYGLELIASENFASRAV
LEALGSCMNNKYSEGYPGQRYYGGTEHVDELERLCQKRALEAYGLDSEKWGVNVQPYSGS
PANFAVYTAIVEPHGRIMGLDLPDGGHLTHGFMTEKKKISATSIFFESMPYKVNPETGYI
DYDRLQENARLFHPKIIIAGTSCYSRNLDYACLRQIANENGAYLMADMAHISGLVAAGVV
PSPFEYSDIVTSTTHKTLRGCRSGLIFYRKGVRSVDAKGKETLYNLESLINQAVFPGLQG
GPHNHAIAGVAVALKQAMTPEFRAYQEQVLVNCKALSSALIDYGYKIVTGGSDNHLILLD
LRSKGTDGGRAEKVLEACAIACNKNTCPGDKSALRPSGLRFGSPALTSRGMEQDDFKKVA
EFIHQGVELTLEVQRSLDPKANLKEFIKALGQEEKFQQRVAEIKAEVEAFAGQFPMPGLP
EL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcaacaaacggccacggtgtgagcaaggaaacatgggagtcacacaacaagatg
atgctggagcctctgggcatcaacgactcagaggttttctccatcataaaaaaagagaag
cacaggcagacgtacggtctggagctgatcgcgtctgagaactttgccagcagagctgtg
cttgaggctctgggttcctgcatgaacaacaagtactctgagggataccccggacagagg
tattatggtggcacagagcatgttgatgaactggagagactttgtcagaagagggcgctg
gaggcctatggtctggactcagagaaatggggcgtcaacgtgcagccatactcggggtcg
cctgctaacttcgcggtctacacggccatcgtggagcctcacggcagaatcatgggactg
gacctccctgatggaggtcacctgacacacggcttcatgactgaaaagaaaaaaatctct
gcaacgtccatcttcttcgagtccatgccgtacaaggtgaatccagagaccggctacatc
gactatgacaggctgcaagaaaacgcacgtctgttccaccccaaaatcatcattgcagga
acaagctgctattcccgcaacctcgactacgcctgtttgaggcagatcgccaacgagaac
ggtgcatacctgatggcagacatggctcacatcagcggtttggtggctgccggtgtggtg
ccctccccctttgagtactctgacattgttacctcgacaacgcacaagacgctgcgtggc
tgccgctctggacttatcttctacaggaaaggggtgcggagtgtcgatgccaaggggaag
gagactttgtacaacttggagtctttgattaatcaggccgtgtttcctgggctgcaggga
ggaccacacaaccacgctattgcaggtgttgctgtagctctcaaacaagccatgacccca
gagttcagggcctaccaggagcaggttcttgttaactgcaaagctctgtccagtgctctt
attgactacggctacaagatcgtcactggcggctctgacaaccacctgatcctgctggac
ctgcgcagcaagggaactgatggaggacgagctgagaaggttctggaagcctgtgccatc
gcttgtaataagaacacctgtccaggggataaaagtgctttgcgtccgagtggtctgagg
tttggatccccagctctgacctccagaggcatggagcaggatgacttcaagaaggtggca
gagttcatccaccaaggcgttgagctgaccctggaggtgcagagaagcctggatcccaag
gcaaatcttaaggagttcatcaaggcattgggacaggaagagaagttccagcagcgggtg
gcagagatcaaggctgaggtggaagctttcgctggtcagttcccgatgcccggcctccct
gagctgtag
DBGET
integrated database retrieval system
