Hippoglossus stenolepis (Pacific halibut): 118123521
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Entry
118123521 CDS
T08308
Symbol
tmc6b
Name
(RefSeq) transmembrane channel-like protein 6b
KO
K21988
transmembrane channel-like protein
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hsp02000
]
118123521 (tmc6b)
03037 Cilium and associated proteins [BR:
hsp03037
]
118123521 (tmc6b)
Transporters [BR:
hsp02000
]
Other transporters
Pores ion channels [TC:
1
]
118123521 (tmc6b)
Cilium and associated proteins [BR:
hsp03037
]
Other cilia and associated proteins
Stereociliary proteins
118123521 (tmc6b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
118123521
NCBI-ProteinID:
XP_035036860
LinkDB
All DBs
Position
2:8961658..8978722
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AA seq
831 aa
AA seq
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MARNANLDLNHPLMEAGLESPVDEEGVHDSFNQLIEEQSQSEGLSDAYELQELQRQLDDE
GRDIVPYLSNPGHDLRERRQRGREVEWADDEGRDPGERWSSATMKILSSMPSRTIGRSRG
AIISQYYNRTMQLRRRKQSRPAIRDFSRSARPSIRGYGMEDSTDAEGADVTKRERLVNNL
QNLSVNDRVRMLRAMPLSVAEKSELRRLALQKERPTFSGSQIPCCSRLKYYIIIAVRQSW
YSWLSFLHSLQLWQVALKRVSGRFGTGVLSYFLFLKTLLFFNLFLFLVMGAFMVLPQAVH
PPVLPSDRRSFSGLELLTGAGYFSDTVMYYGYYCNYTIRGHCRDDGGGQNISVSNGTTLD
CVTKHLSYNMPLAYFFTIVLAFFITCIILVYSMSKSFGQSFRIDKSHSILAVKVLCSWDF
KVIKKTSVKLMSENICTQLKELLAEVNHKHVKNTLCQKLWRLMVHCLAWAICIASTVACV
IGIFFFSQFMHQDLQNRAHSPPKNHLLDEASLLALPVVVSLINLLMPGLFNLAAWMEDYQ
SPSVCTYVAIGRNLMLKVSVLIVLCYHWLGRVANDSHMCWESFVGQELYRFLLMDFIFTL
LDTLLGEFLWRLFSTKVLKRKRKPVFDIARNVLDLIYGQTLAWLGVLFTPLLPAVQILKL
LLLFYIKKSSVMMNCQNPRKPYRVSQMTTIFITLLCFPSFLGASVCVTYTMWSIEPSSSC
GPFRGLKTMFQAGKRWVEELEKDNPNLSVLARAHSYLVENPFFLFVGAGIFLIVIYFHSQ
VVDGQRKIISLLQEQIENEGEDKKFLITRLQSIHEQKRTPTQRLSSQGSSC
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atggcccgaaacgctaacttggacctgaaccaccctctcatggaagctggattggagagt
ccagtggatgaggaaggggttcatgactcattcaaccagctgatagaagagcagagccag
agtgaaggactgtctgatgcctacgagctacaggagctgcagagacaactggacgacgag
ggtcgagatattgtgccctacctgtccaaccctggacatgatcttagggaaaggaggcaa
agaggaagagaggttgaatgggcagatgatgaaggcagagaccctggggaacgctggtcc
tcggccaccatgaagatcctgtcgtccatgcccagtcgcactatcggccgcagcagggga
gccatcatttctcagtattacaacaggaccatgcagctgcggagacgcaagcagagccga
cccgccatccgggacttctcacgctctgccaggccgagcatacgaggctacggcatggag
gacagcactgacgcagagggtgcagacgtgactaaaagggaacgtttggtgaacaacctg
cagaacctttctgttaacgacagagtgaggatgctccgagcgatgccgctcagtgtggct
gagaagagtgaactcaggaggttagcattacaaaaggagagacccacattttctggaagt
cagatcccctgttgtagtcgactcaaatattacatcataatagccgtgagacagagctgg
tacagctggctctctttcctgcactccctccagctgtggcaagtggcactcaagagagtg
agcgggcgctttggcaccggagttctctcatacttcctgttccttaagaccctactcttc
ttcaacctcttcctgttcctagtgatgggtgcgttcatggtgctgcctcaggcagtgcat
cctccagttctaccgtctgacagacgctccttctctggactggagctcctcactggagca
ggctatttctccgacacagtgatgtactatgggtactactgtaactacaccatacgtgga
cactgcagggatgatggtggagggcagaatatctctgtgtccaatggaaccacgctggac
tgcgtgaccaagcatctgtcctacaacatgcctcttgcatacttcttcaccatagtactg
gccttcttcatcacatgtatcatcctcgtgtacagcatgtccaagtcgtttggtcagagc
ttcagaatcgacaaatctcacagtatcctggctgtgaaggttttatgctcctgggacttt
aaggtcatcaagaaaacatccgtcaaactcatgtcggagaatatctgcacccagctcaag
gagctgttagcggaggtgaaccataaacatgtcaagaacactttgtgccagaagctgtgg
agactgatggtccactgtctagcgtgggctatctgcatagcaagcaccgttgcctgtgtg
atcggcattttcttcttctctcaattcatgcaccaggacctccagaatagagctcatagc
ccacccaagaaccacttgttggatgaggccagcctgctggctctgcccgtggtggtgtcg
ctcatcaacctgctgatgcccggcttgttcaacctcgcagcctggatggaggactatcag
tcaccttctgtgtgcacatatgtcgccatcggcaggaacttgatgttaaaagtgagtgtt
cttatcgtcctctgttaccactggctgggtcgggtggccaatgactctcatatgtgctgg
gagagttttgtcggccaggagctttatcgcttcctgctgatggacttcatcttcactctg
ctggacacattgttaggagagtttctgtggaggttgttttctacgaaggtgctgaaaagg
aagaggaaaccagtttttgatatcgccaggaatgtccttgacctcatctatggacagact
ttagcctggttgggagttctctttactcctctcctgcctgcagtgcagattctcaaactc
ctgctgctcttctacattaaaaagagcagtgtgatgatgaactgtcagaatcctaggaaa
ccatacagagtcagccagatgaccaccatcttcatcaccctcctctgcttcccctccttc
ctcggtgcctctgtgtgtgtcacgtacaccatgtggagtatcgagccgtcctcgtcctgc
ggtccattccgtggactcaaaacgatgttccaggcggggaaacgctgggtggaagaactg
gaaaaagataatcccaatttgtctgttctggccagggctcactcttacttggtggaaaac
cctttcttcctgtttgtgggggcaggaatctttctgatcgtcatctacttccatagtcag
gtggtggatggtcaaaggaagatcatcagtttactacaggagcagatagaaaatgaggga
gaggataaaaagtttctcatcactcgcctccagtccatccatgagcagaaacgaacgccc
actcaaagactctcaagtcagggctcttcatgttga
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