Hippoglossus stenolepis (Pacific halibut): 118123575
Help
Entry
118123575 CDS
T08308
Symbol
pkd2
Name
(RefSeq) polycystin-2 isoform X1
KO
K04986
polycystin 2
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
hsp03037
]
118123575 (pkd2)
04040 Ion channels [BR:
hsp04040
]
118123575 (pkd2)
Cilium and associated proteins [BR:
hsp03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
118123575 (pkd2)
Ion channels [BR:
hsp04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
118123575 (pkd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
Fer4_24
EF-hand_1
EF-hand_7
EF-hand_6
Motif
Other DBs
NCBI-GeneID:
118123575
NCBI-ProteinID:
XP_035036957
LinkDB
All DBs
Position
2:20832257..20841401
Genome browser
AA seq
903 aa
AA seq
DB search
MSSSRVRPQQPPQSQTGRLPHRLDSSEGIEMENIQHQDPGLEGAMVTPSPPSRQAWSRDN
PGFEPEDEIMEADWPQASPGRRSVSTASSSSCSSGLGSYTGGGSSPHIPRGGLYPTPTVD
AQQQERHEHRSCLKQILHKIRILWGTELMEDSDSSRERYLRNVLREMLTYIAFLITICIL
TYGMVSANMYYYTKVMSQLFLDTPLSAGDSFTFRHISTMDDFWKFTEGPFLNSMYWEVWY
NNKSLPDNHSLIYYENLLLGVPRLRQVKVRNESCSIHQDLRDEVQDCYNMYTPTNEDTSS
FGPRNRTAWVYTTESEMNDSSYWGQVSKYGGGGYYQDLSRTKAESVVQLQFLKDHLWLDR
GTRAVFLDFSVYNGNINLFCIARLLAEFPATGGVVTSWQFQTVRLMRYVSSWDYFVAVCE
VAFCIFILYYVVEEVLEIRIHRLHYFKSLWNCLDVLILVLSVVAIIMNITRTAMVGSCLK
GLLEKDSSHPSFQPLANLQVQFNNVAAVIVFFSWVKIFKFINFNKTMSQLSSTMSRCAKD
LVGFAIMFFIIFLAYAQLAYLVFGTQVNDFSTFQASIFTQFRIILGDFEFSEIEEANPVL
GPIYFTTFIFFIFFILMNMFLAIINDSYSEVKADMSQQRSEMEMTDLIKKGCNKALMKLR
LKKTAVDDISDSLRQAGGKLNIDELRQDLKGKGHTDAEIQAIFAKYDHDGDQELTEHEHQ
QMRDDLEKEREDLDLERNSLTRPCSGRSFPRTQEDSEEDDDEDSGHSSRRRGSSSGGVSY
EEFQVLVRRVDRMEHSIGSIVSKIDAVIVKLETMERAKLKRRDVLGRLLDGVMEDERLGR
DTDAHREQMERLVREELERWESDDMVSQVSHPQPAAGAGPRPRPSSSLSTDGLEASTNGS
GHV
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atgagctcatccagagtcagaccccagcagccaccgcagagccagactggcaggctgccg
cacagactcgactccagcgaggggatagagatggagaacatccagcatcaagacccgggg
ctcgaaggagccatggtcaccccgtcccctccgtccagacaggcctggagccgggacaac
ccggggttcgagcccgaggacgagatcatggaagccgactggcctcaagcgagccccggg
aggaggtcggtgtccacggcctccagcagcagctgcagcagcggcctgggcagctacacc
ggcggcggcagcagcccgcacatcccccggggaggactgtacccgaccccgaccgtggat
gcccagcagcaggagaggcacgagcaccgcagctgtctgaagcagatactccacaaaatc
agaattctgtggggcacagagctgatggaggacagtgacagcagtcgagagagatacctc
aggaacgtactgagggagatgctcacgtatattgcattcctcatcactatttgtatattg
acctatgggatggtgagtgccaacatgtactactataccaaagtcatgtctcagcttttc
ctggacacaccgctgtctgccggagactctttcactttcaggcacatctcaacaatggat
gatttctggaagttcacagaggggccattcctcaacagcatgtactgggaagtgtggtac
aacaacaagagtctgccagacaatcacagtctcatctactatgagaatctcctcctgggg
gtgccgcgcctccgacaggtcaaagtccgcaacgagtcctgctccatccaccaggatctg
agagacgaggttcaggactgctacaacatgtacaccccaaccaacgaggacaccagctcc
tttggccccaggaatagaactgcgtgggtctatacaacagagagtgagatgaatgacagc
agttactggggtcaggtttctaaatacggaggcggaggatactaccaagatctgtctcgt
acgaaagcagagtccgttgtccagctgcagtttctcaaagaccacctgtggttggacagg
ggcaccagagccgtcttcctcgacttctccgtctacaatggaaacatcaacctcttctgt
atcgctagattgctggcggagttcccggccaccgggggggtggtgacctcctggcagttc
caaacagtgcgtctgatgcgttacgtgtccagctgggactactttgtggccgtgtgtgag
gtggcgttctgcatcttcatcctgtactacgtggtggaggaggtgctggagatccgcatc
caccggctgcattacttcaagagcctgtggaactgtctggatgttctcattttggtgttg
agtgttgttgccattatcatgaacataaccagaacagccatggttggcagttgtctcaaa
ggcctgttggagaaggacagttctcaccccagtttccagcccttggccaacctgcaggtc
cagttcaacaacgtggctgcagtcatcgtcttcttttcctgggtcaagatttttaagttc
atcaacttcaacaagactatgagccagctgtccagcaccatgtcgcgctgtgccaaggac
ctcgtgggcttcgccatcatgttcttcatcatcttcctggcctatgctcagctggcctac
ttggtgttcgggacccaagtcaacgatttcagcacgttccaagccagcatttttacccag
ttccgtatcatcctgggagactttgagttctctgagatcgaggaggcgaacccagtgctt
ggtccgatctacttcaccacctttatcttctttatcttcttcattcttatgaacatgttc
ctggccatcatcaatgactcttactctgaggtgaaggctgacatgtcccagcagaggtct
gagatggagatgacggacctcatcaagaagggctgtaacaaagctttgatgaagttaaga
ctgaagaagacggcggtagatgacatctctgacagcctgcgtcaggcagggggcaaactg
aacattgatgaactccgtcaggatcttaaaggaaagggccacacagatgcagagattcag
gccatatttgccaagtacgatcacgatggcgaccaggagctgacggagcacgagcaccag
caaatgagagacgacctggagaaagagagagaggacctggatctggaacgcaattcgctg
actagaccatgcagtgggcggagcttccctcgcacccaggaagactcggaggaggacgac
gacgaggacagcggccacagctcccgtcgccgtggcagcagctcgggtggcgtctcctat
gaggagtttcaagtgctggtgagacgcgtggaccggatggagcactctatcggcagcatc
gtgtccaagatagacgctgtgatcgtgaagctggaaaccatggagagagctaaactgaaa
aggagggacgtgctgggccggctgctggacggagtgatggaggacgagcgtctgggacgc
gacacagacgcccacagggagcagatggagaggctggtgagggaggaactggagcgctgg
gagtctgacgatatggtctcacaggtcagccacccgcagcccgccgctggtgccggcccc
cgccctcgtccgtcctcttctctgtccaccgacggcctcgaagcgagcacaaacgggagc
ggccatgtatga
DBGET
integrated database retrieval system
