Hippoglossus stenolepis (Pacific halibut): 118123578
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Entry
118123578 CDS
T08308
Symbol
si:dkey-208k4.2
Name
(RefSeq) P43 5S RNA-binding protein-like isoform X1
KO
K09191
general transcription factor IIIA
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hsp03000
]
118123578 (si:dkey-208k4.2)
03021 Transcription machinery [BR:
hsp03021
]
118123578 (si:dkey-208k4.2)
Transcription factors [BR:
hsp03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
118123578 (si:dkey-208k4.2)
Transcription machinery [BR:
hsp03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIA
118123578 (si:dkey-208k4.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
TFIIIA_zf-C2H2
zf-C2H2_6
B129_C2H2-zf
zf-C2H2_jaz
Zf-C2H2_ZNF451_1st
zf-C2H2_STOP2_C
zf-met
Motif
Other DBs
NCBI-GeneID:
118123578
NCBI-ProteinID:
XP_035036955
LinkDB
All DBs
Position
16:14596468..14600063
Genome browser
AA seq
392 aa
AA seq
DB search
MKMETVRSEKPASSPPRPQLKCSHGNCGATFTRQWKLKEHEAVHTGERPCQCTVAGCGRR
FTRKSHLSRHMLQHKGDKQFKCIFATCTKAFLTSSKLKRHVGCAHAAKNKFFTCDQPNCS
LTFKKRRLLKLHLKEHDVSAEFKCTKDGCNATFVSHIARNSHKKKHAGYRCPRANCKVLE
HTWGKLQKHMAKHLATFVCPVCKKVFKKAETLRRHKWTHASHKPVLVCPRKDCQAYFSTT
FNLQHHIRKVHLELLKYKCSFPDCPRKFAMRVHNMFAGPCEESMNRHLLHHDPNATTLKK
RQRAKKSWQKRLDGNHQPLVEQNLHRLFALRMRISRRAKVETNLSGLFNERKIPHYVDPE
VNLRNLFGIKQSRPFEEKPEEAPLKEEKAPAV
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgaagatggagactgtgcgaagcgagaaacctgcgagctctccgccgaggccgcagctg
aagtgcagccacggcaactgcggagccactttcaccagacagtggaaactcaaggagcac
gaggcggtgcacaccggagagcggccgtgtcagtgcacagttgcaggctgcggtcgacgt
ttcacgaggaaatcgcacctgagtcgccacatgctgcagcacaaaggagacaaacagttc
aagtgcatattcgcgacctgcaccaaggctttcctcacctccagcaaactgaaaagacac
gtgggttgcgcccacgcagcgaaaaacaagttcttcacgtgtgaccagcccaactgctcc
ttaaccttcaaaaagcgcagactgctgaagctgcacttaaaggagcatgatgtgtctgcg
gagttcaagtgcaccaaggacggatgcaacgctacgttcgtctcccacatcgcccgcaat
tcccataagaagaagcatgcaggttaccgctgccctcgtgccaactgcaaggtgctcgaa
cacacctgggggaagctccagaagcacatggccaaacacctagccaccttcgtgtgccca
gtgtgtaagaaggtgtttaagaaagcagaaactctgcggcggcacaagtggacccatgct
tcccacaagcctgtcctggtctgtcccaggaaggactgccaggcctacttctccaccacc
tttaacctgcagcaccacatccgcaaggttcacctcgagctcctcaagtacaagtgctcc
ttccctgactgcccacgcaagtttgctatgcgggtacataacatgtttgctggtccctgt
gaggagagtatgaatagacacctgcttcaccatgacccaaatgccaccactctgaagaaa
cgtcaaagggccaagaaatcgtggcagaagcgtctggacggaaaccatcagccccttgtg
gagcagaacctacatcgcctcttcgccctgcgcatgcgcatctccagacgtgccaaagtg
gaaaccaacctctcgggcctcttcaatgaacgcaagatccctcattatgttgacccggag
gtcaacctgcgcaacctgttcggcatcaaacagtcccgtccttttgaggagaaaccggag
gaagctcccctgaaagaggaaaaggctccggcagtttga
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