Hippoglossus stenolepis (Pacific halibut): 118123618
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Entry
118123618 CDS
T08308
Symbol
recql5
Name
(RefSeq) ATP-dependent DNA helicase Q5
KO
K10902
ATP-dependent DNA helicase Q5 [EC:
5.6.2.4
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsp03400
]
118123618 (recql5)
Enzymes [BR:
hsp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
118123618 (recql5)
DNA repair and recombination proteins [BR:
hsp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
118123618 (recql5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
RecQ5
ResIII
Motif
Other DBs
NCBI-GeneID:
118123618
NCBI-ProteinID:
XP_035037001
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All DBs
Position
16:complement(5669628..5681586)
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AA seq
1027 aa
AA seq
DB search
MTASVKAALKTHFGFDGFRTKIQEDVVSAVLRGDRDVFVCMPTGAGKSLCYQLPAVLAEG
ITLVISPLIALIQDQVQRLRELNIPACSINSKLPVGERHLIMSDLESSQPKLKLLYITPE
MLASSSFKPCLTGLLSRGLLSYMAVDEAHCVSQWGHDFRPDYLKLGELRARLPGVPCLAL
TATAPKNVQEDIVKSLRLRLPLSFVTEVFRSNLHYDVIFMELLPKPYDHLHAFIKQALAL
DSGSNGQGCGIVYCRTRDGCETVAYQLTKLGVLAKPYHAGLKTGDRTEAQNDWMQGKVLV
IVATISFGMGVDKANVRFVAHWNLAKSLASYYQESGRAGRDGLPSSCRTYYSRRDKEQMN
FLIRKEVGRRQAKRGSSKEADKAAITDFEAMVSFCEKEGCRHAIISKFFGDKAPNCAGAC
DFCRNPKAVRAQLEKGATLSTRTAAAQSNEATGPFGFIPKVYEGGKKGYGFERFDEGENS
GSEDDGSQRKKEFTDLFKKQMNLRKGTDGQRGDFVPPDDSCRLRDASSQRIPRLTVKARE
HCLYLLEEAIHDHQGAGGTFIYDPLSSGADMEHEVFKNSKSANLYKAAVLKKVAEMKKAA
TPSTGGEKGKGDKTNSSGEAGEVESKLTGEASTSSSTSFSEALQGFTSASEIYSLKRKRV
GAGLRGSSDPFKTAKELLELSRLETASNKGSESGGFYNDGSGGCGESSVKGNKERTNTDT
SSAVTSSIRDRANAVAAPADSPTKAGKAMSKKQKLAEAAKSSRNISQYFAKKQTTEKSQE
EPPELKGLDATVSQTSTLVQQENTVQLEDSLSSVEAMENSPVESEAQDVTQEESKNKVIV
IADDDEEETHQTETLELKQIHDTSHQELRQEEEEEEEEAAEPAPIQELTDDMKASRESSS
PPPKRSRPPDGSSRRVTFNPNVQERALQPASEPPTPLTLKEAADVVVRYLDPFYTRGKFA
TKELFKSFARYLSHLLTEGRSRGKGQVKAEAKALIKKFFSKVQRCESEADWKHLKRPHSC
NATENKE
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgactgcaagtgtaaaagcggcgttaaaaacccacttcgggttcgacggcttccggacc
aagatacaggaggacgtggtgagcgctgtgctcagaggggaccgggatgtgttcgtgtgt
atgcccacaggagcagggaagtccctctgttaccagctgcctgcggtgctggctgagggc
atcactctggtcatatccccgctcatcgctctcattcaggaccaagtgcaacgcctgagg
gagctgaacatccccgcctgctccatcaactccaagctcccagtaggcgagcgccatctg
atcatgagcgacctggagagcagccagccgaagctgaagctcctctacatcaccccagag
atgttggcgtcctcctcgttcaagccgtgcctgacgggcctgttatcccgcggcctgctg
tcctacatggccgtggacgaggctcactgcgtctcccagtggggccacgactttaggccg
gactacctcaaactgggtgagctgcgtgcgcgcctacctggagttccctgcttggccctg
acagcgacagcacccaagaatgtgcaggaggacattgttaagtccctcaggctgcgcttg
ccgctgtcttttgtcacagaggtgtttcgcagtaacttgcactatgatgtgatcttcatg
gagctgctgccgaaaccttatgaccacctccatgcttttattaagcaagcactggcgctg
gacagcgggtctaatggacagggctgtgggattgtttactgtcggaccagggatggctgt
gaaacggtggcttaccagctgaccaagcttggagtcctggccaagccttatcatgcaggt
ctgaaaacgggagatcgcacagaggcacagaatgactggatgcaggggaaagttttggtt
attgtcgccaccatcagtttcggcatgggagtagacaaggccaacgtcaggtttgtagct
cattggaacctcgctaagtcgttggccagttactaccaagagtctgggcgagcgggcaga
gacggactgccctcctcctgtcgcacatactactcccggagagacaaggagcaaatgaac
ttcctcatccgaaaggaagtcggccgcagacaggcaaaacgtggctcttcaaaggaggcg
gacaaagcagccatcacagacttcgaagccatggtgtcattctgtgagaaagaaggttgt
cgtcatgccatcatctccaagttcttcggggacaaagcgccaaactgtgccggcgcctgc
gacttctgccgcaaccctaaagctgtacgagcccagctggagaaaggggcgaccctcagc
accagaaccgctgcagctcagagcaacgaggccacaggaccgtttggcttcattcccaaa
gtttatgaaggtggaaagaagggctacggctttgagaggtttgatgaaggggaaaacagc
ggcagtgaagatgatggctcacagaggaaaaaggagtttactgacctcttcaagaagcag
atgaacctacggaagggaactgacggtcagaggggagattttgttcctccagacgacagc
tgccggctcagagatgccagcagccagaggatccccaggctcactgtaaaggcgagagag
cactgcctgtacctcttggaagaggcaatacatgaccaccagggggcaggaggcacattc
atctacgaccctctgtcctcgggggcggatatggaacacgaggtcttcaagaacagcaag
tctgccaacttatacaaggctgctgtgctgaagaaggtggcagaaatgaagaaagcagca
actccctcgactggaggagaaaagggaaaaggagacaagacgaacagcagcggggaagct
ggagaagttgagtcgaaactcacaggggaagcatccacctcctcttctacgtccttttct
gaggcgctgcaggggttcacgtctgcatcagaaatctattccctgaagcgtaagagggta
ggagccggcctgaggggctcatccgaccccttcaagaccgccaaggaactgctggagctc
tccaggttggaaactgcttcgaacaaagggtcagagagtggtggtttttacaatgacggc
tcaggaggctgcggagagtcgtctgtcaagggcaacaaggagagaacaaacacagacaca
tcctcagctgtaacatcgtccatcagagacagagcaaatgcagtcgctgcccccgcggac
agcccgacgaaagccggcaaagccatgagcaagaagcagaagctggcggaagcagcgaag
agttcccgcaacatttcccagtattttgcaaagaagcaaacaacggaaaaaagccaggag
gagccaccggagctgaagggacttgatgctacggtgtctcaaacttccaccttagtccag
caggaaaacaccgtccagctggaggactcactttccagtgtggaagctatggagaacagt
cctgtggagtcggaggctcaggatgtgacgcaggaggaaagtaaaaataaagtgatcgtt
atagctgatgatgacgaggaggaaacgcatcaaacagagactttagagctgaagcagatt
catgacacatctcatcaggaactgagacaagaagaagaagaagaagaagaagaagcagcc
gaaccagctccaatacaagagttgacagatgacatgaaggcaagcagagagtcgtcgtct
cctccgccgaaacgcagccggcctccagatggcagcagcaggagagtgaccttcaaccct
aacgtgcaggagagggccctgcagccggcgagtgagccgccgacgccactgacgctgaag
gaagcggccgatgtcgtcgtccgatacctggacccgttttacactcgggggaagtttgcc
acaaaggagctgttcaagtcctttgcccgctacttgtctcaccttcttaccgaaggaagg
agtcggggaaaaggtcaagttaaagcagaagccaaagctctcatcaagaaattcttcagc
aaagtccagcgctgtgagagcgaggccgactggaagcacctcaaaagaccgcacagctgt
aacgccacagagaacaaggaatga
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