Hippoglossus stenolepis (Pacific halibut): 118123634
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Entry
118123634 CDS
T08308
Symbol
dnmt1
Name
(RefSeq) DNA (cytosine-5)-methyltransferase 1 isoform X1
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp00270
Cysteine and methionine metabolism
hsp01100
Metabolic pathways
Module
hsp_M00035
Methionine degradation
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
118123634 (dnmt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hsp03000
]
118123634 (dnmt1)
03032 DNA replication proteins [BR:
hsp03032
]
118123634 (dnmt1)
03036 Chromosome and associated proteins [BR:
hsp03036
]
118123634 (dnmt1)
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
hsp02048
]
118123634 (dnmt1)
Enzymes [BR:
hsp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
118123634 (dnmt1)
Transcription factors [BR:
hsp03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
118123634 (dnmt1)
DNA replication proteins [BR:
hsp03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
118123634 (dnmt1)
Chromosome and associated proteins [BR:
hsp03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
118123634 (dnmt1)
Prokaryotic defense system [BR:
hsp02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
118123634 (dnmt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
BAH
DNMT1-RFD
DMAP_binding
zf-CXXC
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
118123634
NCBI-ProteinID:
XP_035037021
LinkDB
All DBs
Position
16:complement(11995585..12007116)
Genome browser
AA seq
1509 aa
AA seq
DB search
MPARTSLSLPEDVRKRLQVLDEDGASDEEHVKEKLKLVQDFLHVDAQDQLSSLEEKMKSS
EITMDVYISKVKALLGKELNLGNGSHVDGVEQKGKTNGFTNGSHKDEDGEDVTMDVQEEE
EAVKSPTASKGKGGRRSKANSDAKKSPASARVTRNGGKQPSILSMFSKVQKRKSEDLNGE
STNGQNELKQEDDVEETREEKRLKVDTNEKTAPEESKSEIVKTVTAAKTPPPKCPDCRQY
LDDSDLKFFQGDPDTALDEPEMLTDERLSLFDSNEDGFESYEDLPQHKITNFSVYDKRGH
LCPFDAGLIEKNVELYFSCVVKPIYDDNPCLDGGVPAKKLGPVNAWWITGFDGGEKALIG
FTTAFADYILMHPSEEYAPIFALMQEKIYMSKIVVEFLQKNPDTSYEDLLNKIETTVPPA
GLNFNCFTEDTLLRHAQFVVEQVESYDEAGDSDEQPIIVTPCMRDLIKLAGVTLGKSMLL
YWRAARRQAIRHPTKIEKDSKGPTKATTTELVYQIFDTFFSDQIEQNDKENGAKRQRCGV
CEVCQSPDCGKCLACKDMIKFGGSGKSKQACKQRRCPNLAVKEAEDDETIEEEDVPVEKA
KKVSQAKRKKQSQCKLTWIGESVQTEGKKKYYKKVSVNDEVLEVGDCVSVSSEDPSTPLY
LARITSLWEDGSGKMFHAHWFLRGTQTVLGESSDPLELVLVDECEDMQLNYVQGKVNIMY
KPPSDNWFMEGGMDVDIKVIDDDGKSFFYQFWYDTDFARFETPPTTTPSDCKFRFCSSCE
RTKERAERECPRAFEPLGNEASDSKALFALASFKGEQFRVGDGVYLPSETFHFSVKPASP
VKRSHRKEDVDEELYPEYYRKSSDYIKGSNQDAPEPFRIGRIKEIFCHRRSNGKSDMSEV
KLRLHKFYRPENTHKGVKSSYHTDINQLYWSDEEVTVSMAEVLGHCHVEYSEDLNESVQD
YSSGGPDRFYFLEAYNAKSKSFEDPPNHARSAVQKGKGKGKGKGKGKGKSSAAQEQQDSQ
NEPQAPKLSKYRTLDVFSGCGGLSEGFHQAGISETLWAIEMWEPAAQAFRLNNPGTTVFT
EDCNVLLKLVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLV
VSYLSYCDYYRPKFFLLENVRNFVSFKKSMILKLTLRCLVRMGYQCTFGVLQAGQYGVAQ
TRRRAIIIAAAPGEKLPRYPEPLHVFAPRACSLSVVVDEKKYVSNVTRGNGGIYRTITVR
DTMSDLPEIRNGAASLEISYNGEPQSWFQRQIRGTQYQPILKDHICKDMSALVEARMRHI
PLAPGSDWRDLPNIEVRLKDGTMTKKLRYSHPDKKNGRSSTGALRGVCTCSGGTPCDPAD
RQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHAEQHRVVS
VRECARSQGFPDTYRFFGNILDKHRQVGNAVPPPLSRAIGMELKKCVLERMKEEHATENI
KQEKMEVTD
NT seq
4530 nt
NT seq
+upstream
nt +downstream
nt
atgccagccaggacctccctgtctctgccagaggatgtcaggaaaaggctgcaggtgctg
gatgaggatggggcttcagacgaggaacatgtcaaagagaagctcaagttggtgcaggac
ttcctccatgttgatgctcaggaccagctgagcagcctggaggagaaaatgaaaagttca
gagatcacaatggatgtttacatctctaaagtaaaggccttgctgggaaaagagctcaat
cttggaaatgggtcacatgttgatggcgtggagcagaaggggaagacaaatggtttcact
aacggttcccacaaagatgaggatggtgaagatgttaccatggatgttcaggaggaagag
gaggctgtcaagtcaccaactgcttctaaggggaagggtggacgcaggagcaaggcaaac
tctgacgccaaaaaatctcctgccagcgcaagggttacaagaaatggtggaaaacagcca
agcatcttgtcaatgttctctaaagttcaaaagcgcaagtctgaggatttgaatggagaa
tctactaatgggcaaaatgaactgaagcaggaagatgatgttgaggagactcgggaggag
aaacgtctcaaagtggacactaatgaaaaaactgctccagaagaatcaaagagcgagatt
gtcaagacagtaactgctgcaaagacaccaccaccaaaatgtccagactgcagacaatac
ttggatgattcagatcttaagttttttcaaggagatcctgatactgcgctggatgaacca
gaaatgttaacagatgagcggctctccttgtttgattcaaatgaggatggatttgagagt
tatgaggatctgccacagcacaagattacaaacttcagtgtgtatgataagcgtggccac
ctttgtccatttgatgctggactgattgagaagaatgtagagctctactttagctgtgtt
gttaaaccaatctatgatgacaacccttgcttggatggtggtgttcctgcgaagaagctt
ggacctgtcaatgcctggtggatcactggttttgatggaggagaaaaggctttaattgga
ttcaccacagcttttgctgattacatcctaatgcatccaagtgaggagtacgcgccaatc
tttgcactgatgcaagagaagatctacatgagcaagatagttgtggaattcctccagaag
aatcctgacactagttatgaagaccttctcaacaagattgagacaaccgtgcctcccgca
gggctgaacttcaactgcttcactgaggacactctgctgcggcacgctcagtttgtggtg
gagcaggtggagagctacgatgaggctggcgactctgatgagcagccaatcattgtcaca
ccgtgtatgagggacctgatcaagcttgctggagtcactctcggaaagagcatgctgctg
tactggagagctgccagaagacaggccattcgtcacccaacaaaaatagagaaggacagc
aaggggccgacgaaggcgactaccactgagctggtctaccagatctttgataccttcttc
tctgaccagatagagcagaatgataaagaaaatggagccaaaagacagcgctgtggtgtc
tgtgaggtttgccagtctcctgattgtggcaagtgtttagcttgcaaggacatgatcaaa
tttggaggaagtggcaaaagcaagcaggcttgcaagcagaggaggtgcccaaaccttgca
gtgaaggaggctgaagacgatgagaccattgaagaggaagatgttccagtggagaaggcc
aaaaaggtttctcaggctaagagaaagaagcagagtcagtgcaaactgacctggattgga
gagtctgttcagaccgagggaaagaagaagtactacaagaaggtctctgtgaatgatgaa
gtgctggaggtgggagactgtgtctctgtttcatctgaggatccatccacccctctgtat
ctggcaaggatcacatccctgtgggaggacggcagtggaaaaatgttccacgcccactgg
ttccttcgtgggactcagacagtgctgggagagtcttctgatccattggagcttgtcctt
gtggatgagtgtgaagacatgcagctcaattatgtccaaggcaaagtgaacatcatgtat
aagcccccatctgacaattggtttatggagggtggcatggatgttgacattaaggtgatt
gacgatgacgggaagagttttttctatcagttctggtacgacacagattttgcacgtttt
gagacccctcccactaccactccatcagactgcaagttcagattctgtagcagctgtgaa
aggactaaagagagagccgaacgggaatgtcctcgcgcttttgagcccctagggaatgaa
gcaagcgactctaaggctctgtttgcgctggcctcctttaagggggagcagtttagggtg
ggagacggtgtctatttgccttctgagacttttcatttcagtgttaaaccagctagtcca
gtgaagcgctcccacagaaaagaggatgtggatgaggagttgtatccagagtattacaga
aagtcctctgactacatcaagggctcaaaccaggatgctccagagcccttccgcatcggg
cgcatcaaggagatcttctgtcacaggcgtagcaacggaaaatctgacatgtctgaggtc
aaactgcgacttcacaagttctacaggcctgagaacactcacaaaggcgtcaaatccagt
taccacacagatatcaatcagctatactggagtgatgaagaagttaccgtcagcatggcc
gaggtgctcggccactgtcatgtagaatattcagaagacctgaatgagtctgtccaggac
tattccagtggtggacctgaccgcttctacttcctggaggcctataatgcaaaatctaaa
agttttgaagaccctccaaatcatgctcgctcagctgtgcaaaaaggcaaaggaaagggc
aaagggaaaggtaaaggcaaaggaaaatcatcagctgctcaggaacagcaggactctcag
aatgaaccacaggcacctaaattgtctaaatatcgcacactggatgtgttctctggttgt
ggtggactctctgaaggcttccaccaggctggtatctctgagacgctgtgggccattgag
atgtgggagcctgcagcacaggccttcaggctcaacaaccctggcaccacagtgttcact
gaggactgcaacgtcttgctgaagctggtcatgtctggagagaagactaattctctgggc
cagaagctgcctcagaagggtgatgtggagatgctgtgtggaggacctccctgccaaggg
ttcagtgggatgaaccgcttcaactctcgcacttattccaaattcaagaactctcttgta
gtctcctatctcagttactgtgattactacagacccaagtttttcctgcttgagaatgtg
aggaactttgtgtcgttcaaaaaatccatgatcctaaagctgaccctgcgctgtcttgtt
cgcatgggttaccagtgcacctttggtgtccttcaggctggtcagtatggtgtcgctcag
acccgtcgcagggccatcatcattgctgcggctcctggagagaagctgcctcgctatccc
gagcctctgcatgtgtttgctcccagagcttgctctctgagcgtagtggtggatgaaaag
aaatacgtcagtaatgtcacacgaggtaatggaggaatctacagaaccatcactgtccgt
gacaccatgtctgacctgccagagattcgcaacggtgcagcttcactggagatttcctac
aatggagaacctcagtcttggttccagaggcagatcagaggaacacagtatcagcctatc
ctcaaagatcatatctgcaaggacatgagtgctctggttgaggctcggatgcgtcacatc
cccttggcgccaggctctgactggagggatctgcccaacattgaagttcggctgaaagac
ggaaccatgaccaagaaactgcgctactcgcaccctgataaaaagaatggccgcagcagc
actggcgcactcagaggtgtctgtacttgttcaggagggacgccatgtgaccctgcagac
aggcagtttaacactctgatcccctggtgtctgccccacactggtaaccgtcacaatcac
tgggctggactctacgggagactggagtgggatggcttcttcagcacaactgttaccaac
cctgaacctatgggcaagcagggccgtgttctgcatgctgagcagcacagagtggttagt
gtgagggaatgtgctcgctctcagggattccccgacacctaccgcttctttggaaacatc
ctggacaaacacagacaggttggaaatgctgtgccccctccactctccagggccataggc
atggagcttaagaagtgtgtgttggagagaatgaaggaagaacacgcaacggagaatatt
aaacaggagaagatggaggtcactgattag
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