Hippoglossus stenolepis (Pacific halibut): 118123659
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Entry
118123659 CDS
T08308
Symbol
lef1
Name
(RefSeq) lymphoid enhancer-binding factor 1 isoform X1
KO
K04492
lymphoid enhancer-binding factor 1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04310
Wnt signaling pathway
hsp04520
Adherens junction
hsp04916
Melanogenesis
hsp05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
118123659 (lef1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
118123659 (lef1)
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
118123659 (lef1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
118123659 (lef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hsp03000
]
118123659 (lef1)
Transcription factors [BR:
hsp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
118123659 (lef1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTNNB1_binding
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
118123659
NCBI-ProteinID:
XP_035037061
LinkDB
All DBs
Position
2:complement(20147652..20189838)
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AA seq
377 aa
AA seq
DB search
MPQLSGGGGGGDPELCATDEMIPFKDEGDPHKEQIFAELSHSEEEGDLADIKSSLVHESE
SSPNSNSHDAGRHSQDSYHEKHRDHLEDGKHHDLYGKSHPYSGYPGYIMMSNMNDSYMNN
GSLSPPMARTSNKVPVVQPSHAVHPLTPLITYSDEHFALGSHSGHHHQDGNNKQGMQRHH
PGPDMTNFYSLSPGGVGQITPPLGWFSHHMVPGPPGPHATGIPHPAIVNPQVKHEPPHET
DIMHMKPQHEQRKEQEPKRPHIKKPLNAFMLYMKEMRANVVAECTLKESAAINQILGRRW
HALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKREKMQETTTGGKRNNFST
CKAKAAATGPLLEMEAC
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgcctcagttatcaggcggcggcggcggcggagacccggagctgtgcgccaccgacgag
atgatccccttcaaagacgagggggacccgcacaaggagcagatcttcgccgagctcagc
cactcggaggaggagggagacctggccgacatcaagtcgtccctggtgcacgagtcggag
agcagccccaacagcaacagccacgacgcaggtagacattcccaagattcatatcacgaa
aaacacagagaccatctggaagatggaaaacatcatgacttgtacggcaaaagccatccg
tactcgggctacccaggctacatcatgatgagtaacatgaacgactcctacatgaacaat
ggctccctctcaccacccatggccagaacgtccaacaaagtccccgtggtgcagccgtcc
catgcagtccacccactcaccccgctgatcacgtacagtgacgagcacttcgctctagga
tctcactctggacatcatcatcaggatggcaacaacaaacaaggaatgcaaaggcatcac
ccgggcccggacatgaccaacttctactccctatcacctggaggagtgggacagatcacg
ccaccactgggatggttctcacaccacatggtgcctggccccccaggccctcacgccaca
gggatcccccacccggccatcgtcaacccgcaggtcaaacacgagccaccgcatgaaaca
gacatcatgcacatgaaaccccagcatgagcagagaaaggagcaggagcccaaaagaccg
cacatcaagaagccactaaacgccttcatgctctacatgaaagagatgcgtgcgaatgtg
gtcgccgagtgcacgctgaaggagagcgcagccatcaaccagatcctgggacgaaggtgg
catgctttatctcgggaagagcaagctaagtattatgagctagcccgcaaggaacggcag
ctccacatgcagctctacccaggctggtccgctcgagacaattatggaaagaagaagaag
cggaagagggagaagatgcaggaaacgaccacaggaggaaaacggaacaatttctccaca
tgcaaagcgaaggcagcagctacgggccctcttctagagatggaggcctgttag
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