Hippoglossus stenolepis (Pacific halibut): 118123737
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Entry
118123737 CDS
T08308
Symbol
pecam1a
Name
(RefSeq) platelet endothelial cell adhesion molecule isoform X1
KO
K06471
platelet/endothelial cell adhesion molecule
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04148
Efferocytosis
hsp04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
118123737 (pecam1a)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
118123737 (pecam1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
hsp04090
]
118123737 (pecam1a)
00536 Glycosaminoglycan binding proteins [BR:
hsp00536
]
118123737 (pecam1a)
04091 Lectins [BR:
hsp04091
]
118123737 (pecam1a)
CD molecules [BR:
hsp04090
]
Proteins
118123737 (pecam1a)
Glycosaminoglycan binding proteins [BR:
hsp00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
118123737 (pecam1a)
Lectins [BR:
hsp04091
]
I-type lectins (Siglecs)
118123737 (pecam1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_2
Ig_3
ig
I-set
Ig_C17orf99
V-set
Zwei_Ig_N
V-set_CD47
VEGFR1-3_N_Ig-like
C2-set_2
Ig_4
Ig_7
Big_13
Motif
Other DBs
NCBI-GeneID:
118123737
NCBI-ProteinID:
XP_035037180
LinkDB
All DBs
Position
16:5617687..5626831
Genome browser
AA seq
805 aa
AA seq
DB search
MDSRPPNLLLLLTGLLHLSPLARGQGSYIIDGVGLTVLPSNTVESGTPVTIHCRVSVSSE
NLPNLTHTFQLKQDDVPIHTTITTENKVEYKLNPARAADSGSYECLVTVKDKSKRSFIQK
LDVTGLQTPVLYLSKRTLYKGDDFKATCSAPDEKGSLIFSFFQRFGNEEPQKMKQVAATG
NTSETTLVLRHVGDYFLYCNYEINLVSGTRHSNHSTEIQVIVTELQISPIMNVLPSPTVY
EGDVIEVVCKVVNSLQDVNVFLTRDRRILKEALVSLNHRFTAQDGDSGELVCKAEWGNVQ
KETYQQIIVKELFSKPRLTMEPLDIFEGDRIKLTCSVTVYVPERINHKTMAFTIYKDNVE
VIRSETYTTVADASRNGNYTCKARSSYLAEHFEKESPALVVKAKVLPSKPVLSVVGGTLV
LGKRFQLLCHSDIGTLPIKYTLHGLRKVIGERWVSKPGEQALFNPPIIFKSLELNNFICH
ARNSQNHPPMVGSVQQLFDSTNVIEPVTIPQFSIDPSMGDVSEGQDLTLTCSVQSGSPPI
TFTWYHAETAGALASENSNKREESYFIRNVMREHKGDYYCEITNPANETKRSSTVSIKVK
LAHWKKGLIAGLCILLVLALVLVVALKTRLLVCGRKRTGDLSVKSAGTKVERLSLTQAEV
NEAANVTPGIMGKSVWSEHVSGSESDDQISEPATAPQYTEVNIGEADPNRAPVKKGTDTV
YSEVRNSMQGVPDQTDGQGSVEYADLNHDTDRHRDQDVQHDHVDGPVQQDHVDGPVQQDH
VDGPVQHDHVDVPVSVDANIADQGE
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggactccagaccccccaacctgctgctgcttctcaccggcctcctgcacctgtccccg
ttggccagaggacagggatcgtacattatagatggcgtcggcctcacagtcctacccagc
aacacagttgagagcgggacaccagtgaccatccactgcagggtcagcgtcagtagcgaa
aacctcccgaacctgacgcacactttccagctcaaacaggacgacgttcccatccacacc
actatcaccacagaaaacaaagtcgagtacaaactcaacccggccagggccgccgactct
ggaagttatgaatgtctggtcacggttaaagacaagagcaaaagaagtttcatccaaaag
ctcgacgtcacaggcctgcagacccccgtcctgtatctgagtaagaggaccttgtacaag
ggtgatgacttcaaagccacctgcagtgctccggatgagaaagggtccctcatattcagt
tttttccagagatttggaaacgaagagcctcagaagatgaagcaggtcgcagccacaggt
aacacatcagagaccacgcttgtcctgagacacgtcggagactacttcctgtactgcaac
tatgagatcaatttggtttctgggaccagacactccaaccacagcactgagattcaagtg
atagtcacagaacttcaaatttccccgatcatgaacgtgctgccatctcctaccgtctat
gagggtgacgtcatagaggtcgtctgcaaagtggtgaattcactgcaagacgttaacgtg
ttcctgacgagggaccggaggatcctcaaggaagccctggtcagcctcaatcaccgtttc
acagcgcaagacggcgactcaggggagcttgtgtgtaaggcagagtggggcaatgtgcag
aaagaaacctatcaacaaatcatagtcaaagagctgttttcaaagccacgcctgactatg
gagcctcttgacatatttgagggtgaccgcatcaaactgacctgctctgtcactgtttac
gttcctgagcggatcaaccacaaaaccatggcgttcaccatctacaaagataacgtcgag
gtcatccgctcagagacgtacaccactgtggcagacgcgagtagaaatggcaactacacc
tgtaaagcccggagttcttatcttgcagaacattttgaaaaagagagcccagcgcttgtt
gttaaagcaaaagttcttccttcaaagcccgtgctaagcgtggtggggggtacgcttgta
ttgggaaagcgcttccagctgctctgtcacagtgacattggcactctgcccatcaagtac
accctacatggccttcgaaaggtaattggagagaggtgggtgagcaaaccgggagaacaa
gccctctttaacccaccaatcatctttaagagcttggagttaaacaactttatatgccac
gcaaggaacagtcagaaccatcctcccatggtgggatcagtgcagcagctattcgattca
accaacgtcatagagcctgtgacaataccacagttttcaatagaccccagcatgggggac
gtctcggaggggcaggacttgaccctcacctgctctgtccagagtggaagtcctcccata
acgttcacctggtatcacgccgagacagcgggcgctcttgcttcagagaactcaaacaaa
cgtgaggaatcgtacttcatacgcaatgtcatgcgagagcacaaaggggattactactgt
gagatcaccaacccagctaacgaaaccaagcggagttccactgtcagcattaaagtgaag
ttggcccactggaagaaaggtctgattgcaggcctctgcattctgctcgtactggccttg
gtcctcgttgtcgcccttaaaacacgtctccttgtatgtgggaggaagagaacaggcgat
ctgtcagtgaagtcagccggcaccaaagtagagcggctgagtctcacccaggcggaggtc
aacgaggctgcaaatgttacaccgggaattatggggaaaagtgtttggagtgaacatgta
tcaggctctgagtccgatgaccagattagtgagcctgctaccgcacctcaatacacagaa
gtgaatatcggcgaggcagatcctaatagagctccggtgaagaagggcacggacacggtg
tacagcgaagtgaggaactccatgcaaggtgtcccggatcagactgatggtcaggggtca
gtagaatatgcggatctgaatcatgatacagatcgccaccgtgaccaagatgtccagcat
gaccacgtggacggacctgtccagcaagaccacgtggacggacctgtccagcaagaccac
gtggacggacctgttcagcatgaccacgtggacgtacctgtcagtgtcgacgccaacatt
gctgaccaaggagaatga
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