KEGG   Hippoglossus stenolepis (Pacific halibut): 118123758
Entry
118123758         CDS       T08308                                 
Symbol
atxn2l
Name
(RefSeq) ataxin-2-like protein
  KO
K23625  ataxin 2/2L
Organism
hsp  Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:hsp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hsp03019]
    118123758 (atxn2l)
Messenger RNA biogenesis [BR:hsp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     118123758 (atxn2l)
SSDB
Motif
Pfam: SM-ATX LsmAD PAM2
Other DBs
NCBI-GeneID: 118123758
NCBI-ProteinID: XP_047199920
LinkDB
Position
16:complement(713704..722790)
AA seq 966 aa
MLMSKQTRNTMKPPAQTQSPPVSSSLVFEGVYNNARMLHFLTAVVGSTCDVRVKNGAAYE
GIFKTLSSQCELAVDAVHKCSDGDGGGGGEEGGGGGGLSSAPKIEEITDTMIFSPTDLVT
MTCRDVDLNFAVRDTFTDSSISSSRVNGEHREKVLQRWDGGGNGENFELESDTSNGWDAD
EMFKLNEEAYGIKSTYDSSLSMYTMPLERGSSEVYRQREARASRLASEIEGSLQYRRRVS
LENDEGRSEEDKYSSVVREREERAREGFSSAIRDGKYVPRTREIGLTAGSARAGGSGQSA
APTSSRHPAPSSSSPRPPSDRSSPPSAGSPPCTNHILPHSLSHPQALAHTSRSSVNGGMV
CNFPKSQRLQRNLRTLNCQSSPAVSRPPKPDAPPQDLPLTVPTYLDSSPSTATKPSDPTP
LFPVDVNEILAAKERTESLSAPLEVKSSKVHSVQQRSQLDELRKFGKEFRLQPSFSSSAT
PSSSDRQHASAPPPSSSPSSSSSPSSSSSSSSSPAPPKPVAPLTSSAQDLQQTTEAAPPN
TAALNLLPGPQASGPEGPQVGGPLPPPRSGEDSSEQTENAAVQVKNSTLNPNAKEFLPIK
GNSVMKPATTPTPPRPTPPSPSVLLPSPGPQGGCALYSSPPGHYLSYMSPITIQGHSIQA
PQMYQYAMSAVNQGKYPRPKAPLVGPRPDHHASAASSLMSAAASAAGPPLVASPYPLSYL
QYGQVIQAMSPYHHGQTVYSMLQGGPRMLTSGAPPQMGPGPQYPGQAEGQQGPQQAMYAP
QSFSHHSSSMLHPQPSSTPTGNQPQHTSPSPGHSHSHGGPQPQSMFHSAGLSAPAPQGHS
SPQASYAMQGYSLPAHQQLSHQQLSHQQLSHQQLSHQQLSHGFPSIGQLTQAHVTGGMSG
PHHSAGHGPPPLMLHYAPPQQGSSSNPQHGPQTQQGAPQHFYIGPAQAVQVQAHPTQQLS
FHPSTN
NT seq 2901 nt   +upstreamnt  +downstreamnt
atgctcatgagcaaacagacgagaaacacaatgaaaccaccagcacagactcagtcccct
cccgtcagcagcagcctggtgtttgaaggtgtttacaacaacgcccgcatgcttcacttc
ctcacagccgtcgtgggctccacctgcgacgtgagagtgaagaacggggccgcgtacgag
ggaatcttcaagacgctgagctcacagtgtgagctggctgtggacgctgttcataaatgc
agtgacggagatggaggtgggggaggtgaggagggaggagggggaggaggtctgtcctct
gcgcccaaaattgaggagatcactgacacgatgatcttcagcccgaccgacctggtcacc
atgacctgcagagatgtcgatctaaactttgctgtcagagacacattcactgactcgtcc
atcagctcgtcgcgggtgaacggggagcacagggagaaggtgctgcagaggtgggacgga
ggtggaaatggagaaaacttcgagctggagtcggacacatcaaacggctgggacgccgac
gagatgttcaagcttaacgaggaggcgtacggcatcaagtccacgtacgactccagcctc
tccatgtacacaatgcctttggagagggggagctctgaggtttaccggcagcgggaagcg
cgagcatctcggcttgccagcgagatcgagggcagcctgcagtaccgccggcgggtgtct
ttagagaacgacgagggcaggagcgaggaggataagtacagctccgtggttcgagagagg
gaggagcgggcgagagagggattctcctccgccatcagggatggtaaatacgttcccagg
accagagagatcggcctcaccgccggcagcgcgagggccggaggctctggtcaatcggca
gcaccaacctcctccaggcacccggcgcccagctcctcctcacccagaccgccctcggac
aggagcagcccgccttcagccggcagcccgccctgcaccaatcacatcctcccacactcc
ctctcacatccgcaggcgctggcccacacgagccgctcgtctgttaatggaggtatggtg
tgtaacttcccaaaatcccagagacttcaaagaaacctacgaaccctgaactgccagtcc
tctcctgcagtgtctcgtcctcccaaaccagacgcccctccccaggacctccccttgact
gtccccacctacctggactcctccccctccaccgccaccaaaccctccgaccccacccct
ctgttccccgtagatgtgaatgaaatcttagcagctaaagagcgaacggagagtttgtca
gctccactggaagttaagagcagcaaagttcactcggttcagcagagatctcagctggac
gagctccgcaagtttgggaaagagttcaggctgcagcccagcttctcttcctcagcgact
ccgtcatcttcagaccggcagcacgcctctgccccgcccccctcctcctccccctcttcc
tcctcctcaccctcctcctcctcttcctcttcatcctccccggctccaccgaaacctgtc
gcccccctcacctcctctgcccaagatctacagcagaccacagaggcagctccccccaac
accgctgctctgaatcttctgcctggcccccaggcctcggggccagaggggccacaggtc
gggggccccctgccgcccccccgcagtggtgaggacagcagtgaacaaacagagaatgct
gcagtacaagtgaaaaactcgacactgaatccaaatgcaaaagagtttctccccataaaa
ggaaactcagtgatgaaacctgcgacgacgccgactcctccccggccgaccccccccagc
ccctcggtgctgctgccttccccaggaccacaaggagggtgcgctctctacagcagcccc
cccggacactacctgtcctacatgtcccccatcaccatccagggacactccatccaggct
ccacagatgtatcagtacgcgatgtcagctgttaaccaggggaaataccccagacccaaa
gctccgctggtgggcccccgcccagatcaccacgcctccgcagcctcctccttgatgtca
gcggcagcctccgcagccggccccccgctggtggcgtctccgtacccgctgtcctacctg
cagtacggtcaggtgatccaggccatgtccccgtaccatcacggacagaccgtttactcg
atgctgcaggggggccctcggatgctgacatctggggcccctcctcagatgggccctggc
ccccagtaccccggccaggccgagggccagcaggggccacagcaggcaatgtacgctcct
cagtcgttctctcaccactcgagctccatgcttcatcctcagccctccagcacccccact
gggaatcaaccccagcacacgtcgcccagtccaggacactctcacagtcacggtggccct
cagcctcagtccatgtttcactctgcaggtctgtcggctcccgctccgcagggccacagc
tcccctcaggcctcctacgccatgcaggggtacagcctcccggcccaccagcagctgtcc
caccagcagctgtcccaccagcagctgtcccaccagcagctgtcccaccagcagctgtcc
cacggcttcccctccatcggccagctcacacaggctcacgtcactggaggcatgtcaggg
ccccaccactctgcgggccacggccccccacccctcatgctacactacgcacccccccag
cagggcagcagctccaacccccaacacggcccacagacccaacagggggcgccacaacac
ttctacatcggaccagcccaagctgttcaggtccaggctcacccgacccagcagctgtcc
tttcatccctccacaaactga

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