Hippoglossus stenolepis (Pacific halibut): 118123778
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Entry
118123778 CDS
T08308
Name
(RefSeq) transcription factor Sox-9-A
KO
K18435
transcription factor SOX9 (SOX group E)
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hsp03000
]
118123778
Transcription factors [BR:
hsp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
118123778
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Ortholog
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GFIT
Motif
Pfam:
HMG_box
Sox_N
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
118123778
NCBI-ProteinID:
XP_035037259
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Position
16:complement(9718916..9722873)
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AA seq
480 aa
AA seq
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MNLLDPYLKMTEEQEKCHSDAPSPSMSEDSAGSPCPSGSGSDTENTRPIDNHLLLGPEYK
KEGEEEKFPVCIRDAVSQVLKGYDWTLVPMPVRVNGSNKNKPHVKRPMNAFMVWAQAARR
KLADQYPHLHNAELSKTLGKLWRLLNEVEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKS
VKNGQNEPEDGEQTHISPNAIFKALQQADSPASSMGEAHSPGEHSGQSQGPPTPPTTPKT
DLPTTKVDLKREGRPIQEGTSRQLNIDFGAVDIGELSSEVISNMGSFDVDEFDQYLPPHS
HAGVAGAAQAGYTGSYGISSSSVGQAANVGAHAWMSKQQQQQQHSLTTLGGGGEQGQQGQ
QRTTQIKTEQLSPSHYSEQQGSPQHVTYGSFNLQHYSASSYPSITRAQYDYSEHQGGANS
YYSHAAGQGSGLYSTFSYMSPSQRPMYTPIADTTGVPSVPQTHSPQHWEQQPIYTQLSRP
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcctcgacccttacctcaagatgacagaagaacaggagaagtgtcactccgac
gctcccagccccagcatgtctgaggactccgcgggctctccgtgcccgtccggctccggc
tcggacaccgagaacacccgtccgatcgacaaccacctcctcctgggcccagagtacaag
aaggagggcgaggaagagaagttccccgtgtgcatcagggatgcggtgtcccaggtgctg
aagggctacgactggacgctggtgccgatgccagtgcgcgtcaacggctcaaacaaaaac
aaacctcacgtcaaaagacccatgaacgcgttcatggtgtgggcacaagccgcgcggagg
aagctggccgaccagtacccgcatctgcacaacgcggaactcagcaagaccctgggcaaa
ctttggagattgctcaacgaagtcgagaagcgcccgtttgtggaggaagcggagcgtctg
agagtgcagcacaagaaggatcatcccgactacaaatatcagccgaggcggagaaagtct
gtgaagaacggacaaaacgagcccgaggacggcgagcaaacgcacatatctcccaatgcg
atcttcaaggcgctgcagcaggccgattctccggcgtccagcatgggcgaggcgcactct
ccaggagaacattcaggtcaatcccagggcccgccaacacccccaaccacccccaagaca
gacctgcccaccaccaaggttgacctgaagcgtgaggggcgccccattcaggagggcacc
agtcgccagctcaacatcgactttggcgccgtggacattggcgagctgagcagcgaagtc
atctccaacatggggagctttgacgtcgatgagtttgatcagtacctgccgcctcacagc
cacgctggggtggccggcgcagcccaggccggctacactggcagctacggcatcagcagc
tcctcagtcggccaggcggccaatgtcggggcccacgcttggatgtccaagcagcagcag
cagcagcagcactctctgaccaccttgggtggaggaggcgagcagggccagcagggtcaa
caaagaaccacccagatcaagacggagcagctgagccccagtcactacagcgagcagcaa
ggctccccacagcacgtcacctacgggtccttcaacctgcagcactacagcgcctcctct
tacccctctatcacaagagcacagtatgactattctgaacaccaaggtggtgccaactcc
tactacagccatgcagctggccagggctccggcctgtactccaccttcagctacatgagc
cccagccagaggccgatgtacaccccgatcgccgacaccaccggagtgccctctgtaccc
cagacccacagtccgcagcactgggagcagcagcccatttacacacagctgtccaggccg
tga
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