Hippoglossus stenolepis (Pacific halibut): 118123791
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Entry
118123791 CDS
T08308
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent T-type calcium channel subunit alpha-1I
KO
K04856
voltage-dependent calcium channel T type alpha-1I
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04010
MAPK signaling pathway
hsp04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hsp04040
]
118123791
Ion channels [BR:
hsp04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
118123791
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
ETRAMP
TMEM208_SND2
Motif
Other DBs
NCBI-GeneID:
118123791
NCBI-ProteinID:
XP_035037283
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Position
16:6712666..6785031
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AA seq
2273 aa
AA seq
DB search
MVILLNCVTLGMYQPCENIDCXSDRCQILQAFDAFIYIFFALEMVVKMVALGIFGRRCYL
GDTWNRLDFFIVMTGMVEYSLDLQNINLSAIRTVRVLRPLKAINRVPSMRILVNLLLDTL
PMLGNVLLLCFFVFFIFGIIGVQLWAGLLRNRCYPEKNFTLSSGMTLPTPYYQPEEDDER
PFICSLPSDNGIMSCTDVPARREGGRTCCLDKEDALHRQALGLSLEPLTNGSGAGEAMGL
CINWNQYYTRCHTGNSNPHKSAINFDNIVYAWIVIFQVITLEGWVEIMYYVMDAHSFYNF
IYFILLIIIGSFFMINLCLVVIATQFSETKQREHQLMQEQRAQCLSSSTLASMAEPGDCY
EEIFQLVCHVLRKAKRRSTALYYTLRGKPPPAGGGRGNRRAGGKMNGERHHSRHPKSSHC
PHQSKQDHGSQTEANSISLSVPQNPEDCPICALSLKDGARAAGDSDNREEDEEDAVKETD
KEENHLEERGEGEKKKKKKKRRTCFGLCRDLWKGMRRKLWGIVESKYFSRGIMIAILINT
ISMGIEHHNQPEELTNVLEICNIVFTSMFTLEMILKLTAFGFFEYLRNPYNIFDGIIVII
SVCEIIGQADGGLSVLRTFRLLRVIKLVRFMPALRRQLVVLMKTMDNVATFCMLLMLFIF
IFSILGMHIFGCKFSLKTEAGDTVPDRKNFDSLLWAIVTVFQILTQEDWNMVLYNGMAST
SPCAALYFVALMTFGNYVLFNLLVAILVEGFQAEGDANRSYSEDDRSSCNFEETEKQKDS
LQLSDPKICTLTPNGHMDLSSLPAGLFPGERLTFALGSRKNSAISLGRANLEQRALYPCR
RYHNWGRTLPHHPQALWARRSSWNSLGGGRPCSSSSPCASPSFTPTSARPFYGYGLGGLG
GLVGGSLRIRGPRASSSPHRHFHGVHPDEEEALLSPPAVASHSLHLPHPMLPGHFVPRRD
RRALSLELPHLLQVPGPPHPPPLPPPPHHLPPPMALHRKKSVSGGMIISAGGGGGLDSLG
GLGGVHQDCNGKTPLSQLLQPPTRHQTEQAGGADPQSQLMTDVFPQVNARSKDREDLDDD
IEYSLCFRIQKMLEAYRPDWCESREDWSVFLFSPQNKFRQICQSIIAHKLFDYVVLAFIF
SNCITVALERPKILQGSLERVFLTISNYIFTAIFVSEMTLKVVSMGLYVGDQAYLRSSWN
VLDGFLVFVSLIDIVVSMAGGAKILGVLRVLRLLRTLRPLRVISRAPGLKLVVETLITSL
KPIGNIVLICCAFFIIFGILGVQLFKGKFFYCFGPDVKNITNKSDCLQANYKWVHHKYNF
DNLGQALMSLFVLASKDGWVNIMYHGLDAVAVDQQPVTNNNPWMLLYFISFLLIVSFFVL
NMFVGVVVENFHKCRQHQEVEEAKRREEKRQRRMEKKRRKAHKLPYYASYCNVRLMIHTL
CTNHYLDLIITFIICINVITMSLEHFNQPHSLDLALKYCNYFFTSTFVLESVLKLIAFGF
RRFFKERWNQLDLAIVLLSVMGIILEEIEISSALPINPTIIRIMRVLRIARVLKLLKMAT
GMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGELVCNADYPCEGMSRHATFEN
FGMAFLTLFQVSTGDNWNGIMKDTLRECPPDHGTDMDYACNPSLQFISPMYFVSFVLTAQ
FVLINVVVAVLMKHLDDSNKEAQEEAEMDAEIELELAQGTLCCMGAPSCGGGGVEKGLVV
AGSGPGGPAGGRERGDGRGEAGRKMRHAAATAHQGLYNSRSSSRTLYSPAQESQWLDSVS
LLIKDTLEGEMLMIDNLSGSVFHHYSSPAPICKDCKSHPQEQIRMAEIEQASLKSEQLSD
KSSSPALPDDLSLDENTSYQLLARGGKGSSSSDSEEAGGGGHQTRTVVQSQVQGLGQPCR
ALCTGSEMDTTLQEMDLQTHQAHMRSPHCSPGGVSRSSNKDRNKEGAGGDRGISPLFHLP
AEFFHPAGVIIPAPPRSRSLRLTRSHKLTSPASWASLRSPGAHREMLCTQFPSHSDSSLA
TGSSEGSLQTTLEEGLSFSISPPQNLELPLPTAPLPLVCPLPLPEDRTILSSPVQTLRPR
SSPSSALTLQATRGHQRSQSSGRGSTSPCYTRDDSIDPSDEDLGIGIGSSIGGCGSSQAG
NSEHLSETLSSLSLTSLLSPSSLVYPGGAVKKCNSTGSLDQGGVLLSSRGKDGRREILGL
ELMDPQGFLANPWTGALVDKRRGDGSVEIGVGEEGFKGKSSSQTTVGPCRKNR
NT seq
6822 nt
NT seq
+upstream
nt +downstream
nt
atggtgatcctgctcaactgtgtgacactgggcatgtaccagccctgtgagaacatcgac
tgcnactcggaccgctgccagattctgcaggccttcgatgcgttcatctacatcttcttc
gcgttggagatggtggtgaagatggtggcgcttgggatctttggccgtcgctgttacctg
ggagacacctggaacaggctggacttcttcatcgtcatgactgggatggtggaatactcg
ctggacctgcagaatatcaacctgtcggccattcggacggtgagggttcttcggccgctc
aaagccatcaacagagtaccaagtatgcggatcctggtgaacctgctgctcgacactctg
cccatgctgggcaacgtgctgttgctctgcttcttcgtcttcttcatcttcggcatcatc
ggcgtgcagctgtgggcggggctactgaggaaccgctgctacccggagaagaacttcact
ctgtcgtcaggtatgactcttccaactccgtactatcagccggaggaggacgatgaacgc
cccttcatctgctccttgccgtctgacaatggcatcatgtcgtgtaccgatgtgccggcg
aggcgcgaaggaggccgcacctgctgcctggacaaggaggatgcgctccacagacaagct
ctgggcctgagtctggagccgctgaccaacggcagtggtgcaggtgaagcgatgggtctg
tgtatcaactggaaccagtattacactcgctgccacacagggaacagtaaccctcacaaa
agtgccatcaactttgacaacatcgtctacgcctggattgtcatttttcaggtgatcact
ctggagggctgggtggagatcatgtactacgtgatggatgctcactccttctacaacttc
atctacttcatcttactcatcattattggttcgttcttcatgatcaacctgtgcctggtg
gtcatcgccacccagttctctgagaccaaacagcgggagcaccagctgatgcaggagcaa
agggctcagtgcctgtcctcctccacgttggccagcatggctgagccgggagattgctac
gaggagatcttccagctggtctgccacgtcctccgcaaggctaagaggagatccacagct
ctctactacacgctgaggggcaagcccccgccagctggtggaggcaggggtaacaggcgc
gccggagggaagatgaacggagagcggcatcactccagacacccaaaatcatcccactgt
ccacaccagagcaagcaagaccacggctctcagacagaagccaactccatcagtctgtct
gtccctcaaaatccagaggactgccccatatgtgcgctgtcgctgaaagacggggcaagg
gcagcgggagactctgacaaccgcgaggaggacgaggaggatgctgtgaaagaaacggac
aaggaagagaaccacttagaggagaggggagaaggggagaagaagaagaagaagaagaag
aggaggacgtgcttcggactctgtagggacctttggaagggtatgaggaggaaactttgg
ggcattgtggagagcaagtacttcagccggggcatcatgatcgccattctcatcaacacc
atcagtatgggcatcgagcatcataaccagcccgaggagctgaccaacgtcctggagatc
tgcaacatcgtcttcaccagcatgttcacgctggagatgatcctcaagctgactgcgttc
ggcttctttgagtacctgaggaacccctacaacatatttgatggcatcattgttatcatc
agtgtgtgtgaaatcatcggccaagcagacggcggcctgtcagtgctgaggaccttccgg
ctgctgagggtcattaagctggtgaggttcatgcctgcactgaggcggcagctggtggtg
ctgatgaagacgatggacaacgtggccaccttctgtatgctgctcatgctgttcatcttc
atcttcagtatcctggggatgcatatatttggctgcaagttcagtctgaagacagaggcc
ggagacacggtgcccgacaggaagaactttgactccctgctctgggccattgtcactgtc
tttcagattctgactcaggaggactggaacatggtgctctacaacggcatggcctccacc
tccccctgtgctgctctctattttgtggctctcatgacgtttggaaactatgtgctcttc
aacttactggtcgccatcttggttgagggcttccaagctgagggcgacgcaaaccgctcc
tactcggaagatgacaggtcctcctgtaattttgaggagactgaaaagcagaaagactct
ctgcagctctcagacccaaagatctgtacgctgacccccaatgggcacatggacttgtcc
tccctgcctgctggtctgtttccaggagagaggttgacctttgctcttggctccaggaag
aatagcgctatttctcttggcagggccaacctggagcagagggctttgtatccctgtcgg
cgttaccacaactggggacgcacgctgcctcaccaccctcaggccctgtgggcccgtcgt
tccagctggaacagcctgggaggcggccggccttgttcttcctcatctccctgcgccagt
ccatccttcactcccacttccgcaaggcccttctatggctacggcctaggtggtctggga
gggttggttggagggagcctgcgtatccgtggtccccgtgcctcgtcatccccgcaccga
cacttccatggcgtccacccagacgaggaggaggctctgctctctcctcccgctgttgct
tcccactctcttcacctcccccaccctatgctcccaggtcactttgtacccaggagggac
cgcagagctctatcactggagctgccccacctgctgcaggtgccgggacccccacaccct
ccaccactgccgccgccgccacaccacctaccgccccccatggcactccacaggaagaag
agcgtctctggtgggatgataatcagcgcaggtggtggcggtggcctcgacagtctgggt
gggttagggggggtccaccaggactgtaacgggaagacgccgctgtctcagcttctccag
cccccaactagacaccagaccgagcaggccggaggggcggacccccagagccagctgatg
actgacgtcttcccccaggtgaacgcgcgcagcaaggaccgggaggacctggatgatgac
atcgaatatagcttgtgcttccgcatccagaagatgttagaggcgtacagaccggactgg
tgtgagagcagagaggactggtccgtcttcctgttctccccacagaacaagttcaggcag
atatgccagtcgattatagcccataagctgtttgactatgtggtgctggccttcatcttc
tccaactgcatcacggtagctctggagaggcccaagatattacagggcagcttggaaaga
gtctttctcaccatctccaactacatctttacggccatcttcgtgagcgagatgactctc
aaggtggtctccatgggtctgtatgtgggtgaccaggcttacctgcggagcagctggaac
gtcctggatggcttcctggtgtttgtgtctttgatcgacatcgttgtgtccatggcgggt
ggggccaagatcctgggggtgcttcgagtcctcaggttgctcaggacattgcgtcctctc
agggtgatcagcagagctccgggtctgaagctggtggtggagaccctcatcacttccctc
aagcccattggcaacatcgtcctcatctgctgtgctttcttcatcatctttggtattctc
ggtgtacagctgtttaaaggcaagttcttctactgcttcggccccgacgtcaagaacatt
accaacaagtctgactgtctgcaagccaactacaagtgggttcaccacaagtacaacttt
gacaacctgggacaggctctgatgtccctgtttgtccttgcctccaaagacggctgggtt
aacatcatgtatcacggcctggatgctgttgctgtggaccaacagccggtgaccaacaac
aacccgtggatgctgctgtatttcatctccttcctgctcatcgtcagcttcttcgtcctg
aacatgtttgtcggcgtggtggtggagaacttccacaagtgccgccagcaccaggaggtg
gaggaggccaagaggcgagaggagaagcgtcagcggcgcatggaaaagaagaggaggaaa
gcccacaagctgccgtactacgccagctactgcaacgtgcgcctgatgatccacacactg
tgcacaaaccactacctggacctcatcatcaccttcatcatctgcatcaacgtcatcacc
atgtccctcgagcacttcaatcaacctcactctctggatctcgccctgaagtactgcaac
tatttcttcacctccacttttgttttggagtctgtgctcaaactcatcgccttcggcttt
cgacgcttcttcaaagaaaggtggaaccagttggacctggccattgtgcttctgtccgtg
atgggcatcattctggaggagattgagatcagctccgctctgcccatcaaccccaccatc
atcagaatcatgagagtactgaggatagcacgagtgctaaagctgctgaagatggcgaca
ggaatgagggccctgttggatacggtggtccaagccctgcctcaggtgggtaacctgggc
ttgctcttcatgctgctgtttttcatctacgccgccttaggagtagagcttttcggagaa
ctagtttgcaatgcggactacccatgtgagggtatgagtcgtcacgctacttttgagaac
tttggcatggccttccttaccttgtttcaagtctccacgggcgacaactggaatggcatc
atgaaggacacattgcgggagtgcccgcccgaccacggcaccgacatggactacgcctgc
aatccgagccttcagtttatctcgcccatgtattttgtctccttcgtgctcaccgcccag
ttcgtgctcatcaatgtggtggtggctgtgctgatgaagcacctggacgactccaacaag
gaggcccaagaggaggcggagatggatgcagaaattgagctggagctggcccagggcacc
ctctgttgcatgggcgcccccagttgcgggggtgggggggtggagaagggactggtcgtc
gcaggatcagggcccggaggcccggcaggaggccgggagagaggagacggccgaggagaa
gcagggaggaagatgaggcatgcagcagccactgcacaccaaggactgtacaactcccgc
agctccagtcggaccctttactcaccagcacaagagagccagtggctggacagcgtttct
ctcctgatcaaggacacgctagagggggagatgctgatgatcgacaacctctctggctct
gtcttccaccactactcctcccctgcacccatctgcaaagactgcaagagccacccgcaa
gagcagatcaggatggcagagattgagcaggcgtctctgaaatcagagcagctgtcggac
aagtcttcgtcccctgcgctgccagacgacctgagcctggacgagaacacttcctaccag
ctgctggcgcgagggggcaagggaagtagcagcagtgactctgaggaggccggaggtgga
ggccaccagactcgaaccgtggtgcagagtcaggtgcaggggctgggtcagccctgcagg
gccctctgcactggttctgagatggacaccactcttcaggagatggacctgcaaacacac
caagcacacatgcgttcacctcactgcagccccggtggcgtttcaaggagcagcaacaag
gacagaaacaaagaaggagcaggaggagacagaggcatttctcctctcttccatctgcct
gcagagttcttccaccccgcaggagtaatcatcccagcgcctccccgcagtaggagccta
aggttgacaaggagccataagctgacttccccagcctcctgggcttcactccgctccccg
ggagcccatagagagatgctctgtacacagttcccgtcccacagtgactcgtcccttgct
acaggcagctctgaaggtagcctccagaccaccctggaagagggactgagcttcagcatc
tctccgccacagaacttggagctgccactgccaacagctcccttaccacttgtgtgccct
ctcccattgcctgaagataggactatcctctcctccccggtccagaccctgagaccaagg
tccagtccctcgtcagctttaacccttcaggccaccaggggccaccagcggagccagagc
agcgggcgaggtagcaccagcccatgctacacccgcgacgactccattgacccttcagat
gaagacctaggtataggcattggatcgtcaattggtggttgtggctccagccaagcgggc
aacagtgaacacttgtcagagacactgagcagcttgtcactgacatcactgctgtccccc
agctccctggtgtaccctggaggagcagtgaagaagtgcaacagcacaggcagcctggac
caagggggggtgttgctgtcatcccggggcaaggatggccgcagggagattctaggcctg
gagcttatggacccccagggcttcttggccaatccctggacaggggcattagtcgataaa
agaagaggagacggaagtgtggaaataggagttggagaagaaggattcaaagggaagagc
tcaagccaaacaaccgtggggccttgtcgaaaaaacagatga
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integrated database retrieval system
