Hippoglossus stenolepis (Pacific halibut): 118123797
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Entry
118123797 CDS
T08308
Symbol
grin2aa
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2A
KO
K05209
glutamate receptor ionotropic, NMDA 2A
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04020
Calcium signaling pathway
hsp04080
Neuroactive ligand-receptor interaction
hsp04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
118123797 (grin2aa)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
118123797 (grin2aa)
04082 Neuroactive ligand signaling
118123797 (grin2aa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hsp04040
]
118123797 (grin2aa)
Ion channels [BR:
hsp04040
]
Ligand-gated channels
Glutamate (ionotropic)
118123797 (grin2aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
118123797
NCBI-ProteinID:
XP_047199925
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All DBs
Position
16:complement(4977951..5110431)
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AA seq
1547 aa
AA seq
DB search
MKWFGRMSLSSKRSKRRSRRSSSWSSSSSGRNSALLSLALLVVVTLFADPVVAQKQRTGG
ASDKVPVLNIAVILGRTRYISDRDIRALWSKEDPIDVNVVTLLVNETDPKSIITHMCDLM
SGTKIHGVVFGDGTDQEAIAQILDFISSQTLIPILGIHGGSSMIMADKDVKSTFFQFGAS
IQQEALLMLNIMEEYDWHIFSIVTSKFPGYQEFINILKTTVDNSFVGWDLQNIITLDAVE
EDSRSQIMLKKVQSPVVLLYCSKDEAVIILDEARSLGLTGFGYIWIVPSLTTGNPDITPE
DFPSGMISVSYDDWDYPLEARVRDGLGIITSAAAAMLEEYGDIPEAKTSCYGPMEKTSKL
PPSALHKYMMNVTWDGRDLSFTEDGYQEFPKLVVIVLNKEREWEKMGKLDNRSLTLKYPV
WPRFNSFGDAELDDNHLSIVTLEEKPFVIVEDVERLTGTCMRNSVPCRKHIKDNTTEAGG
TYIKKCCKGFCIDILKKIATYVKFTYDLYLVTNGKHGKKINNVWNGMVGEVVYKKAVMAV
GSLTINEERSEVIDFSVPFVETGISVMVSRSNGTVSPSAFLEPFSASVWVMMFVMLLLVT
AMAVFMFEYISPLGFNRNLAQGKDPHGPSFTMGKAVWLLWGLVFNNSVPVQNPKGTTSKF
IVSVWAFFAVIFLASYTANLAAFMIQEEFVDQVTGLSDNKFQNPYAYSPPFRFGTVPNGS
TERNIRKNYPAMHQYMVKYHQTGVVDALVSLKTGKLDAFIYDAAVLNYMAGRDEGCKLVT
IGSGYIFATTGYGIALQKGSYWKRQVDLAILAIIGDGEMEELEAQWLTGICHNEKNEVMS
SQLDVDNMAGVFYMLATAMGLSLITFVSEHLFYWRLRYCFTGVCSGTPGLLFSISRGIWS
CIHGVHIDMKKKTDMDFSPQDKMLKLIKSAKQMTNMSNLAGSRLNSPKREFMHSAGPMIM
DMMAEKGNFIYADNRSYAPKDMIYGDTGDLQAYLANRHKDHLNNYIFQGGQHPLTLNDAN
PNTVEVAVSADSVQTNAKPPRTLWKKSVDTLRSVPPGPPPMPDMLMPDPRMSMKTQRYLP
EDTAHSDISDCSSRAASYKDPENNKHLKPKDNLKKRAVTSKYPRDCSEVELSYLKTKQVP
GSTNQTGRGGGGEKIYTIDSDREMSLHSDPVLYRESRGLAADDLEYPEIYSDHSDNYRKC
EQPIIHLNSSPLHHTDSDLLPDPAYSKHYNLKEKNMSAHESMDRYKQTHCRSCLSKVTAS
YPPAGSYPPTGPVAASATRSPYNRCEACLHMANLYDISEDQLLTDPLVSPTLHHQQQQQP
DEMFGLYWPQTDGPHVQKRNRLRLSRQHSFDNIMLEKPKDVDLSRPARSVSLKEKDRFLD
STSDSHYANLFGMRPYSGRLFGTGSKSMFNHNLEESKRSKSLYPAHGSDNPFLSHSLRDD
TSSRLVHGRSSSDIYKQLAVASPAAVLGAPPIKTRNDANNLRSSVKSTTSYCSRDGRITN
DMYNKEHVMPYSATKTSAYPAPRGVLNSAQFSNRRVYKKIPSLESDV
NT seq
4644 nt
NT seq
+upstream
nt +downstream
nt
atgaagtggtttggcagaatgtccctcagcagcaaaaggagtaagaggaggagtagaagg
agcagcagctggagcagcagcagcagtggtaggaacagcgcgctgctctccttggctctc
ctggtggtggtgaccctgtttgcggaccccgtggtggcacaaaagcagcggactggtggc
gcctcggataaagtgccggtcctgaacattgcggtgatcctgggacgcacgcgctacatc
tccgacagggacatccgggcgctgtggagcaaggaggaccccattgacgtcaatgtggtc
acactgctggtcaacgagacggacccgaaaagcatcatcactcacatgtgcgacctgatg
tccgggaccaagatccacggggtggtgtttggggatggcaccgaccaggaggccatcgcc
cagattttggattttatttcctcgcagacgctcatacccatcctcggcatccacggaggg
tcgtccatgatcatggctgataaggacgtgaagtcgacgttcttccagttcggcgcctcc
atccagcaggaggctctgctgatgctgaacattatggaggagtacgactggcacatcttc
tccatcgtcacgtcgaagttccccggctaccaggagttcatcaacatcctgaaaacgacc
gtggacaacagttttgtggggtgggacctgcagaacatcatcaccttggacgcggtggag
gaagacagtcggtctcagatcatgctgaagaaggtccagtctcctgtggtcctgctctac
tgctccaaggacgaggcggtcatcatcctggacgaggcccgctccctgggcctcaccgga
tttggatacatctggattgtgccgtcgctcaccaccgggaacccagacataacgcccgaa
gacttcccgtcggggatgatttcggtgtcgtacgacgactgggactacccgctggaggcg
cgggttcgcgacggtttagggatcataacgtcggcagcggcagccatgttggaggagtac
ggcgacatccccgaagccaaaacgtcctgttacggcccgatggagaagacgtccaagctg
ccgcccagcgcactacacaagtacatgatgaatgtgacatgggacggcagagacttgtcg
tttacagaggacggctaccaggaattcccaaagctggtggtgattgttctcaacaaggaa
agggagtgggagaagatgggaaagctggacaaccgcagcctgacactgaagtacccggtg
tggccgcgcttcaactccttcggagacgccgagctggacgacaaccacttgtccatcgtc
actttggaggagaagccttttgttattgtggaggacgtagagaggctgactggtacctgc
atgaggaactctgtcccctgcagaaagcatatcaaagacaacacaacggaggctggtggg
acatatatcaagaagtgctgcaaaggcttctgtatcgacattctaaagaaaattgccacg
tatgtcaagttcacctatgacctgtacctggtaaccaatggcaagcatggaaagaagata
aacaatgtctggaatgggatggtgggagaggtggtctataagaaagccgtcatggccgtc
ggatctctgacgatcaatgaggagcgttctgaggtcatcgatttctccgtcccgttcgtg
gaaactgggatcagcgtcatggtctcccgtagcaacggaacagtctccccttcagccttc
ctcgagccattcagtgcatcagtgtgggtgatgatgtttgtgatgctcctactggtcact
gcaatggctgtctttatgtttgagtacatcagtcctctgggcttcaacagaaacctggcg
cagggcaaagacccccatggtccttctttcaccatgggcaaggccgtgtggctgctgtgg
ggtctggtcttcaacaactctgtgccagtgcagaacccgaagggaaccaccagcaagttc
atcgtgtctgtgtgggccttcttcgctgtcatcttcctggcctcctacactgccaacctg
gccgccttcatgatccaggaggagttcgtcgaccaagtcaccgggctctcagacaataag
tttcagaacccgtatgcttactcgcctccgttccgcttcgggacggttccaaacggttcc
acagagaggaacatcaggaagaactaccctgccatgcaccagtacatggtgaaatatcat
caaactggcgttgtggacgcacttgtcagtctcaaaacaggtaaactggatgccttcatc
tacgatgctgcagtgttgaactacatggcgggcagagatgaagggtgtaagctggtgacc
attggcagcgggtacatctttgctactaccggctacggcattgctctacagaaaggctcc
tactggaaacgacaggtggacctggctatcctggccattatcggagatggtgaaatggag
gaactggaagcccagtggctgacgggtatttgccacaacgagaagaacgaggtgatgtcc
agtcagctggatgtggacaacatggccggggtcttctacatgctggccacggccatgggg
ctgtcgctcatcacctttgtctctgagcatctcttctactggaggctcagatattgcttc
accggggtctgctccggcacgcccgggcttcttttctccattagtcggggaatctggagt
tgtatccatggagtccacattgacatgaagaaaaagacggatatggactttagccctcag
gacaaaatgcttaagctcataaagtcagccaaacagatgaccaacatgtctaacctggcg
ggctctcgcttgaactcacccaaacgtgagttcatgcactccgctggcccaatgatcatg
gacatgatggcagagaagggcaacttcatctacgctgacaaccgaagctatgctcccaaa
gatatgatctatggggacactggtgacctacaggcttatctcgctaaccgccacaaagac
caccttaacaactacatcttccagggaggccagcatcctctgaccctaaacgatgccaat
cccaacacagtagaggtggcagtgagtgctgattcagtccagactaatgccaagccgcca
cggaccctgtggaagaagtctgtggacacgctacgttcggtaccacctgggcctcctcca
atgcctgacatgctgatgccagacccacgcatgtcgatgaagacacagcgctacctccct
gaggacacagcccactccgacatctccgactgctccagtcgggcagcctcctacaaggac
ccagaaaacaacaagcacctgaaacccaaggacaacttaaaaaaaagagctgtgacatca
aaatacccaagggattgcagtgaggtggagctgtcctacttaaagactaagcaggtcccc
ggcagtaccaaccaaactgggagaggaggaggaggagagaaaatctacactatcgactca
gaccgagagatgagcctgcattcagaccccgttctctatcgcgagagtcgtggccttgct
gcagatgatttggaataccccgagatctactccgaccacagcgacaactataggaagtgt
gagcagcccatcattcatctgaactcctcacctttgcatcatacagactctgatctccta
ccagacccagcttactccaaacactacaacctgaaagagaaaaacatgtctgcacatgaa
tccatggatcggtacaaacagacacactgccgttcctgcttgtccaaagtgaccgctagc
tacccaccagcagggtcatacccacctactggacctgttgcagcttctgccacacgctca
ccctataatcggtgtgaagcatgcctccacatggccaacctgtatgacattagtgaagac
cagctcctcacagaccccttggtcagccccaccttgcaccaccaacagcagcagcagcca
gatgaaatgtttggtctgtattggccacagacagacgggccgcatgtccaaaagaggaat
cgcttgaggctgagtcgtcagcactcctttgacaacatcatgctagaaaaacccaaggat
gtagacctgagccgaccggcgcgcagtgtcagcctcaaagagaaggatcgcttcctagac
tccacatctgactcgcactatgcgaacctctttggaatgcgtccctattccggcagactg
tttggcactgggtccaaatccatgtttaaccacaacctggaggagagcaagaggagcaaa
tccctgtacccggcccatggctcggataacccattcctcagccactcgctgagggatgac
accagcagcagactggtccatgggcgtagttcctctgatatttacaaacagctggcagta
gcttcgcctgcagcggtccttggagcaccccccatcaaaacacgtaacgatgcgaacaat
ctccgctcttccgttaaatccaccacttcatactgctcacgggacgggcggataactaac
gacatgtacaataaagagcatgtgatgccttactcagccactaagactagtgcatacccg
gccccgcgtggcgtcctaaactcagcccagttcagcaatagacgggtgtataaaaaaatc
cccagtctggagtccgatgtttag
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