Hippoglossus stenolepis (Pacific halibut): 118123833
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Entry
118123833 CDS
T08308
Symbol
si:ch211-106h11.1
Name
(RefSeq) LOW QUALITY PROTEIN: volume-regulated anion channel subunit LRRC8D
KO
K22038
volume-regulated anion channel
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hsp04040
]
118123833 (si:ch211-106h11.1)
Ion channels [BR:
hsp04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
118123833 (si:ch211-106h11.1)
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Gene cluster
GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_4
LRR_14
LRR_1
LRR_R13L1-DRL21
LRR_LRWD1
LRR_9
Motif
Other DBs
NCBI-GeneID:
118123833
NCBI-ProteinID:
XP_047199791
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Position
16:2275063..2278866
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AA seq
889 aa
AA seq
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MFSLSELVPLNQQQNRSKLLKPWWEVFMDYLVVLMLMTSVLTCTEQLSRDRVVCLPLDPS
VTANTSSRSFSTRDTVATTPSSEQPMQIEPDDLHSAPRGRRTHLVYQQYVYISQVCYHEA
LPLCSRFFPYMALLQSLVLLASGSFWLHFPRTSARIEHFLAILAKCCESPWTSQALSHAA
RQENVRDMEAERQPPRPPPPSSSPPVTRTRSSTTDSGTDSPLLRRSDSSVSSAVPPSPCP
STLSCASTMSSGSLTSRGCSPGSKPSVVVDSPRQDISLDKSDGEQARALFERVRKFRSHC
ESSAVIYKVYLAQTIFKLLMVTLIVSYTIPLLSNLSFTHTCRPEEQDLVGYAAFDCIHVL
SSLLRKLLVAYLALLGLYGLLSIYTLSWILHSSLRQYSFHSLKELCSLRDVPDLRNDLAF
LLHMLDQYDPLLVQRLSMFLSPVGESRLLEESLEQRWGEEKLRAMTSVDEDGCSRLQLVA
LPCLPPALFTLSQLQVLKLELIKEARFTAQVANMTSLRELHLYHCTAAVDPSALGVLQER
LESFHLTFTQASEIPSWVLSLRSLHELHLSGRLSSEGGVGRSWALGSLSRLRHLRVLVIR
GMLQRIPAEVCEVAGSLVRLEIHNEGTRLLVLTGLKRMLDLTELLLQDCQLQRLPSALLS
LTKLRTLDLQHNNLRTLEELLSLAHLRRLSCLRLAYNRVVVLPASVGVLRGLELLDLSNN
QLQSLPSALFTLRLLRRLLLAGNLLEGLPAEIKSLQLLTELDLSGNRLENLPPELFSGCL
ELRILNVAHNCLSSLPCGIAALNKLCRLDLRTNILQELPAEXGCCTGLHRGGLLVEDWLF
LSLPPSVRDFLSRSTSDAHSGDRSRPESDSFPYFSPTQWSFSSALESQI
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgttctccctgtcagagctggtgcctctcaaccagcagcagaaccggtccaaactgctg
aagccctggtgggaggtcttcatggattacctggtggtgctgatgctgatgacgtctgtt
ctgacctgcaccgagcagctgtccagggatcgagtggtgtgccttcccttggatccgtct
gtcactgcaaacaccagcagtcgcagtttctcaactcgtgacactgtggctacgactcca
tcgtcagagcagccgatgcaaattgaacctgacgaccttcactctgcacccagaggtcga
cgcactcatctggtctatcagcagtacgtgtacatcagccaggtgtgctaccacgaggcc
ttgccgttgtgctcccgcttcttcccctacatggccctgctgcagtctctggtgctgctc
gccagcggctccttctggctccacttcccccgcacctccgctcgcatcgagcacttcctg
gccatcttggcgaagtgctgcgagtcgccctggacgtctcaagccctgtctcacgccgcc
cggcaggagaacgtccgggatatggaggcggagagacaacctccccgacctcctccccct
tcatcctcacccccagtgacccgcacgagaagctccaccacagactcaggcacagacagc
ccactgctgaggaggtcagatagtagtgtgtcctcggccgtacctccctctccgtgcccc
tccacgctctcctgtgcctccaccatgtcgtcagggtccctcacctcccgggggtgctct
cctggttccaagccgtcggtcgtggttgacagtcccaggcaggacatcagtctggataaa
agtgatggggaacaggccagggctctgttcgaaagggtcaggaaattccggtcccactgt
gaaagctcagctgtcatctacaaggtctacttggctcagacgatattcaaactgctgatg
gtaactctgatcgtgagttacaccatccctcttctcagcaacttgtccttcacgcacacg
tgtcgccctgaggagcaggacctggtgggctacgctgcctttgactgtatccacgtgctc
tcctcacttctacgcaagctgctggtggcctacctggccctgctggggctgtacggcctt
ctcagcatttacaccctcagctggattttacacagctctttacgacagtattcattccac
tccctgaaagagctgtgctccctaagagacgtcccagacctgaggaacgacctggccttt
ctgttacacatgttggaccagtatgaccctttgctggtccagcgactctccatgtttttg
tcgccggtcggtgagagcaggctgctggaggaaagcttggagcagcgatggggggaggag
aagcttcgagccatgacgagcgtggatgaagacggctgctccagactgcagctggtggcc
cttccttgccttcctccagccctcttcaccctcagccagctccaggttctcaaactggag
ctcatcaaagaggccaggttcactgcccaggtagccaacatgacgtccctcagagagctc
cacctctaccactgcacagcagctgtggatcccagtgcacttggagtcctccaggaacgt
ctggagagcttccacctcacctttactcaggcatcagagatccccagctgggtcctctcc
ctccgcagcctgcatgagctccacctctctggtcgcctgagcagtgaaggtggggtaggc
cgcagctgggcgctgggcagcctcagccggctgcgtcacctccgtgtgctggtgattcga
ggcatgctacagcggatccctgcagaggtgtgtgaggtggcaggcagcttggtgagactg
gagatccacaacgagggcaccaggctgctggttctgacaggcctgaagcgaatgctcgac
ctgaccgagctgctgctgcaggactgccagctgcagcggttgccctctgcactgctgtct
ctgaccaagctgcggacacttgacctgcagcataataacttgaggactctggaggagctg
ctcagtctggctcatctacggcgtctctcttgcctcagacttgcctataaccgtgttgta
gtgctgccggctagtgttggtgtgcttcggggccttgagctcctggacctgtccaacaac
cagctccagagccttccctcagccctcttcactctgcgcctccttcgcaggctcctgttg
gcgggcaacttgctggaggggctgcctgcagagataaagtccctgcagctgctcacagag
ctggatctcagtgggaacaggctggagaacctgccccctgagctattcagcggttgtctg
gagctgcgcatcctaaacgtggctcacaattgtcttagttctttaccttgtgggattgca
gctttaaataagctgtgcaggttggacttgcgtaccaacattctgcaggagctgcctgct
gaanctggctgctgcacagggctccacagagggggtctactggtggaagactggctgttt
ctttcgttgcctcccagtgtcagggacttcctgagccgttccacctccgatgcacactcg
ggggatcgttcccgtccagagtcggacagcttcccgtacttctctccgacacagtggagc
ttctcttccgctctggaatcacagatataa
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