Hippoglossus stenolepis (Pacific halibut): 118123946
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Entry
118123946 CDS
T08308
Symbol
raver1
Name
(RefSeq) ribonucleoprotein PTB-binding 1 isoform X2
KO
K24999
ribonucleoprotein PTB-binding 1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsp03041
]
118123946 (raver1)
Spliceosome [BR:
hsp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
118123946 (raver1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
118123946
NCBI-ProteinID:
XP_035037552
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All DBs
Position
16:12099082..12108279
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AA seq
752 aa
AA seq
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MAAAVSVSAAAQDESTDAGPSFAPRPLHDNHDHAADHESWMTGGRRRSEAEAGEEDPPPG
RECQRRVDEDLTSLSPEEVESRLERTRREFYNRRKIIIKNLPSDVSNQEVHELLCNYDLK
YCFVDKYKGTAFVTLLNGEQAQCAIIEFHQHVLRDREISVQLQPTDALLCIANLPRAFTQ
QQFEELVRPFGNLERCFLVYSASTGHSKSYGFVEYMKKDSAARAKSELLGKQLGSRMLYV
HWTEVGSLTYPLLHSKCLCVDRLPPNLLTAQDLRNALADTHAPVFCQLAQGQDGSFRRFA
VLEFATAEMAEEAQRLSDVRLLGGTHIRVSFCAPGPPGRSMLAALIAAQTMAVNRGKGLL
PDPTAMQILTGLNNPATLKMLLNPLSHGHKQGLLGAAPTMPLLANPALSAALLQLLLQNQ
AKAQQQAFLGNHLLWAQVLHNKENPLVPCAGLIGENPLAALPVQQGVHLLGDLPQGLGLQ
ADPLAPHKPMPLGRALTMEQESPTAACTFPQTSSPTLQGISMPMMGGMMGADGLTAQGIS
ILGDPPKEMTHPQSAFLGVNNGFPSGGSCRPHPYRKRPTLSNVSNQPAHQSIQPNYSLRY
QDSYSPEYPPLHQDPLAHLYEQQENLDTGALAGFGQQASGHPEYTERFSHYGYPPNPPLS
SYYSSGPEASSNGSLPTTQLNRAVGMPPVSHTSNYPPGLDHAVKTPIGSHKRLFSRLIPS
PEPSPEGGYVGQHSQGLGGHYADSYLKRKRIF
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgctgtgtctgttagcgcagctgcccaggacgagagcacggacgcgggaccc
agtttcgcccctcgtccgctccacgacaaccacgaccatgctgcggatcacgagagctgg
atgaccggaggccgtcggcgttccgaagcggaggccggcgaggaggacccgccgccggga
cgcgagtgtcagcggagggtcgacgaggacctgacgtccctgagccccgaggaggtcgag
agccgcttggagagaactcgccgggagttttacaaccggagaaaaatcatcataaagaat
ctcccctccgacgtcagcaaccaggaggtccacgagctgttgtgcaactacgacctgaag
tactgctttgtggacaaatacaagggcacagcgtttgttaccctgctcaatggagaacag
gcacagtgtgccatcatagagttccaccagcatgtgctcagggaccgggagatatctgtg
cagctgcagccgacagacgcgctgctgtgcatcgccaacttgccccgtgccttcacccag
cagcagtttgaggagttggtgcggcccttcggtaacctggagcgctgcttcctggtgtac
agcgcctccaccgggcattccaagagttacggctttgtggagtacatgaagaaggactcg
gccgccagggccaagtcagagctgttgggaaagcagctgggctcccgcatgctctacgtc
cactggaccgaggtgggctccctcacctacccgctgctgcactccaagtgtctgtgcgtc
gaccgccttcccccgaacctgctgacagcccaagacctacgcaacgccctggctgacaca
catgcgccagtcttctgccagttggctcagggacaagatggaagtttccgccggtttgca
gttttggagtttgccactgcagagatggcagaagaggcacagcgactctctgatgtcagg
ctgctcggtgggacacacatcagggtgtccttctgtgcccctggccctcctggaagaagc
atgttggctgctctaattgctgcccaaaccatggctgtgaacaggggtaaaggtctcctc
cctgatcccacagccatgcagatactcacaggccttaataaccctgccaccctcaagatg
ctgctcaaccctctgtcacatgggcacaaacaaggcctccttggggcagcccccacgatg
ccactgctggccaaccccgccctctccgctgccctgctccagctgctacttcagaaccag
gccaaggcacagcagcaagcctttctgggaaatcatcttctttgggctcaggtgctgcac
aataaagaaaaccccctagtgccttgtgcaggactcatcggggagaatcctctggctgct
ctgcccgtccagcagggagtccatctgctcggagacctgccccaaggtcttggtcttcag
gcggatcctctggccccccataagccaatgccacttggcagagccctcacgatggagcag
gagtctcccacagcagcatgtaccttcccccagacttcctctcccaccctgcagggcatc
tctatgcccatgatgggtggcatgatgggggcagatggcctcacagcacaagggatatcc
atactaggagatcctcccaaagaaatgacgcatccccagagtgccttcctcggtgtcaac
aatggatttccatcaggaggaagctgcagacctcatccttacaggaagaggccaacactt
agcaatgtgtccaaccagcccgcacaccagagcatacagccgaattacagcctgcgctac
caggactcctacagccctgaataccctcctttacaccaggatcctctggcccacttgtat
gagcagcaggagaacctcgatactggagccttggcaggatttggacagcaggcctctggt
caccccgaatacaccgagcgattttcccactacggttaccctcccaacccacccctgtcc
tcgtactacagctcagggcccgaggcctccagtaacgggagcctgcccaccactcagctc
aacagggctgtgggaatgcctcctgtgagtcacacttctaactatcccccaggcctggac
catgctgtgaagactcccattggtagccacaagcgtttgttctcccggctgatcccgtct
ccagagccgagcccagagggtggctacgtgggccagcactcccaaggcctcggtggccat
tatgcagactcctacctaaagcggaagcgtatattttaa
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