Hippoglossus stenolepis (Pacific halibut): 118124005
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Entry
118124005 CDS
T08308
Symbol
ap5z1
Name
(RefSeq) AP-5 complex subunit zeta-1 isoform X1
KO
K19025
AP-5 complex subunit zeta-1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsp03400
]
118124005 (ap5z1)
DNA repair and recombination proteins [BR:
hsp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
118124005 (ap5z1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TPR_AP5Z1_C
TPR_AP5Z1
SPG48
Motif
Other DBs
NCBI-GeneID:
118124005
NCBI-ProteinID:
XP_035037667
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Position
16:complement(3920816..3928093)
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AA seq
819 aa
AA seq
DB search
MFSHGTESLIKQAREIQEPELQKFYGRLVKLLVGKEFGHETMDSLQRLHLILSATKRTRT
LPAELHRRLLSLLSLPVEPLQVLSSAVLRETLPLSGQELNYNEENIQLNSHSAALLLSQA
GSRADLSSLCAQLLRSLDSRQPEGPTHSLTHTLPVLNAVLTHSPECLNEDNVTLLSKKLV
DWLRYASIIQGGGASSGGFFTGPRARQPVPIAELDGTVSGDFFTVLCVGQGFTEDQWMNV
YSFSMLHHWLLTYHSAPSGNAFADTANRLQLSFSLSHSHSFSNDDRSEVDGSVVSMVSAT
SSSSRLLPPKERLREKAFQYCLRLIEQSDRKALKRTDTELQKACLVEAVCILDCVCVEDT
SLVYRTFPCVKALFGRLSSDLTFARVLLPIAQFYLNHGEMAAVDCESVWKLVFGRFPAEL
FNDPFLAHELLRFLRLNLGSLQLRVPQYPRSFPNLLKFLAWDSPAVVDDFVDLLPSLVTV
ETAVELLHTLLDLPCLSATLVLQLRSTSSPISEPGGRGLLSLDAFRSPSFRGLFLYLLRP
EAGSGDTIDRLSTLHEFLAESADWPRVVQCSQTVPVLLHIFFNTVITVADQKLLAHLILV
MLERSRLLLNLPTYVKEIHRVFSCHLLRLCKLHPSLVVDQSHVLLEFAGTTAGVYSKEEI
YTHVVWALGEYLSVSCDSRCSVTLITSCFETLEAVLFEITSSTPPPGASCPAPRVITTLI
SALAKLASRSHDLIPRVSLFLSKLRTVSRAGSVAWCSDEEDLVAIVTRGEELWSLLRTPG
VAQSVLTPPPHVTTPQWHRDTNLSMSLQLRTLTSLTHTQ
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgttctctcacggtacagagagtttgatcaaacaagcgagggagatccaggagcccgag
ctgcagaagttttacggcagattagtgaagctgctcgtggggaaggagttcggtcatgag
acgatggactccctgcagcggctgcacctcatcctctctgccaccaagcgcaccaggacg
ttgcccgcggagctacacaggaggctgttatctctcctctctttaccagtggagccgctt
caggtgctgagctcagctgtgctcagagagacactgcccctctctggccaggaactgaac
tacaacgaggagaacattcagctgaacagccattccgccgccctgctgctctcacaggcg
ggatccagagccgatctgtcatctctgtgcgctcagctccttcgcagcctggacagccgt
caacccgagggtccgactcattcgctcacacacacgttgcccgtcctcaacgccgtcctc
acacacagccccgagtgcctcaacgaagataacgtcaccctactgagtaaaaagcttgtc
gattggctgcgttatgcaagcatcatacagggaggcggagcttcttcaggtggatttttc
acaggacccagggcgcgacagccggtgccgatagcagagctggacgggacggtgtctggg
gatttcttcactgtgctgtgtgtgggccaaggcttcaccgaggaccagtggatgaatgtt
tactccttttccatgctgcatcactggcttctcacctaccactctgctcctagtggcaac
gccttcgcagatactgcgaacaggctacagctcagcttctctctgtcccactcccactcc
ttttctaatgatgaccggtcggaggtggacggctcagtggtgtccatggtctcggcaact
tcctcctccagccgactgctgcctccaaaggagcgtctgagggagaaggcgttccagtac
tgcttacgcctcatcgagcagagcgaccgcaaggcactgaaacggacagacaccgagctg
cagaaagcgtgtttggtggaggccgtgtgtatcctggactgtgtgtgtgtggaggacacg
tcactggtctacagaacgtttccgtgtgtgaaggccctgtttggtcgtctcagctccgac
ctgacgtttgccagagtcctgctgcccatagcacaattctacctcaaccatggtgaaatg
gcggcggtggactgtgagagcgtgtggaagctggtgtttggccggttccccgccgagctc
ttcaacgatccctttctggcccatgagcttctacgcttcctacgactgaacctcgggagc
ctgcagctgcgagtcccgcagtatcctcgctcattcccaaacctgctgaagtttttagcc
tgggacagcccagcggtggtggatgactttgtggatctgctgccctctctggtcaccgtt
gaaactgcagtggagctgctccacacgctgctcgacctgccctgtctctctgccacgctg
gtcttgcagctcaggtcgacgagctcgcccatctccgagccaggtggacgtgggctcctg
tcactggacgccttccggagcccttcgttcaggggcctttttctctacctgcttcgacca
gaggccggatcaggggacacgatcgacagactgagcacgctccatgagttcctcgctgag
tcggctgattggccgagggttgttcagtgttcccagacggtcccggtgctgttgcacatt
tttttcaacaccgtcatcacggtggctgaccagaagcttttagcccatttgatcctggtg
atgctggagagaagcagactcctcctcaacctccccacatacgtcaaggagatacacagg
gtgttcagctgccacctgctgaggctgtgcaagctccacccctctctggtagtggaccag
tctcatgtgttgctggagtttgctggaaccacagccggcgtttacagcaaagaagaaatc
tacacacacgtggtgtgggcgctgggagaatacctctctgtttcctgcgacagtcgctgc
tctgtgacgctcatcacttcctgttttgagacgttggaggcggtgctgtttgaaataact
tcatcgaccccgccccctggggcgtcttgccccgcccccagagtcatcaccactctcatt
agtgctctcgctaagctggcgtcacgctctcatgacctcatccccagggtttctctgttc
ctctccaagctaagaactgtgagcagagcgggttcagtggcctggtgctctgacgaggag
gacctggttgccatagtgacgaggggggaggagttgtggtcgctgctgaggacccccggt
gtggctcagagtgtcctgaccccgcccccgcatgtcaccacaccacagtggcaccgagac
acgaacttgtccatgtcattgcaactgcgaaccctcaccagcctcacacacacacagtga
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