Hippoglossus stenolepis (Pacific halibut): 118124040
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Entry
118124040 CDS
T08308
Symbol
tlr3
Name
(RefSeq) toll-like receptor 3 isoform X1
KO
K05401
toll-like receptor 3
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04217
Necroptosis
hsp04620
Toll-like receptor signaling pathway
hsp05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
118124040 (tlr3)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
118124040 (tlr3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
118124040 (tlr3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
hsp04054
]
118124040 (tlr3)
04090 CD molecules [BR:
hsp04090
]
118124040 (tlr3)
Pattern recognition receptors [BR:
hsp04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
118124040 (tlr3)
CD molecules [BR:
hsp04090
]
Proteins
118124040 (tlr3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_9
Tlr3_TMD
TIR_2
TIR
LRR_EndoS
LRR_6
Motif
Other DBs
NCBI-GeneID:
118124040
NCBI-ProteinID:
XP_035037720
LinkDB
All DBs
Position
2:23276252..23282870
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AA seq
922 aa
AA seq
DB search
MQRKHWVFEAMCSPRSLHFTWIVIGCSILTGPQHCLAHQKKTSCQVQDGRADCSHLSLSA
IPPYLPGNISSLDMSHNRLVRIPPASLNPYQGLLHLDVSYNSVTKLDQGLCQMLPLLQTL
NTKHNEVHLLKEEDLSHCTSLIWLNMASNRLKLQGQPFSALKNLKSLDVSMNKLMSAKIS
SHPQLPNLVTLNLAFNDFTTLKKDDFSFLENSALLQVLDLSSVPLKTLEPGCLKSISGLR
TLIMDGSKMGVQVLSKLCSELSGSSIDALSLRKMNLVTLPNTTFAGLQKANLTFLDLSHN
SMGKIEEGTFQWLPRLQTLILTDNNIKHVTKATFQGLKSLTKLTLTKALVKSRTSSTPII
DDFSFQMLSALESLMLQGTAFREITAHTFTGLTSLKELDMSWSSCISLRIISNKTLLSLA
GSPLRKLNLTATAITRINPGSFSVLGNLTTLLLDLNFIEQTLSGKEFEGLGQIQEIHMTY
NHWKIQLSSTSFINVPNLRVLTLKKSLNSTTLHLDQSPFQPLSNLTYLDLSNNNIANIRQ
SMLKGLENLKVLKLPHNNFARLWKDANPGGPVLFLEGAEKLTTLWMDNNGLDEIPQEALR
GLTNLRELSLSNNLLNSLKDSVFDDLKSLQVLRLQKNLITAVKPEVFGTPMRKLSLLVID
KNPFDCTCESILWFVTWLNSTNMTIVPDLSDQYMCNTPLAYFNHSIMQFDTLSCKDNTPF
YALYLLSSTTVLMLMVTALFVRFHGWRIQFYWNILVSRTLGFSDASVEEGREFEYDAYII
HAERDARWVERVMVPLENENCKFYLEDRDAVPGVSLLQSIMENMRRSRKIVFVVTESLLR
DPWCRRFTAHQALHQVIEASRDSVVLVFLQDVHDYKLSRALFLRRGMLRPRCILDWPEDK
ERVPAFHQKLLMALGMTNRFRD
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgcagaggaaacattgggtttttgaagcaatgtgttcccctcgttcccttcacttcaca
tggatcgtcatcggatgctccattctgacggggccgcagcattgcttggcccatcagaag
aagacgtcctgccaagtgcaagacggcagagcggactgcagccacctcagcctcagtgcc
atccctccttacctgccggggaacatctccagcctggacatgtcccacaaccgactggtg
aggattccccctgcgtcactcaacccctaccaggggctcctccacctcgacgtcagctac
aacagtgtcaccaagctggaccagggtttgtgccagatgctgccgctgctgcagacgctg
aacaccaaacacaacgaagtgcacttgctgaaagaggaggatctgagtcactgcacgagc
ctgatatggttgaatatggcgagtaataggctaaagctacaggggcagcccttctccgca
ctaaagaatctgaaatctcttgatgtttccatgaacaaactgatgtcagccaagatcagc
tctcatcctcagctgcccaacctggtgaccctcaatctggcgttcaacgacttcaccaca
ctgaagaaagacgacttctctttccttgaaaattcagcccttctacaagtcctcgatctc
tcatccgtgcctctaaagacattggagcctggttgccttaagtccatttcaggcctgcgt
actttaatcatggatgggagcaaaatgggcgttcaggttctttccaaactctgctcggag
ctgtcggggtcatccatcgatgccttgtctctacggaagatgaatctggtcacactccca
aacacgacctttgcagggctgcagaaagcaaatctgacctttctggatctgtcccataac
agcatgggtaaaatagaggaaggaacgtttcagtggctccccagacttcagactctaatt
ttgaccgacaacaacatcaagcacgtgaccaaggccacgtttcaggggctaaagagtttg
acaaaactcacactgacaaaagccctggtgaaaagtcgaacctcctccaccccgataatc
gacgatttctctttccaaatgttaagcgccctggagagtttaatgttacagggaactgca
tttcgggaaatcacagcacacacgtttacaggcttgacgagtcttaaagagcttgatatg
agctggagtagttgcatatcgctccgaattatctccaacaaaaccttattgtcacttgcg
ggatcgcctctcagaaaactaaatctcacagcaacagctataacacgcataaatcctgga
agcttctccgttttgggaaacctcaccactcttcttctagatttaaatttcatagaacaa
actctcagtggaaaagagttcgaaggcctgggtcagattcaggagattcacatgacctac
aaccactggaaaatccagctgagctcaacctccttcatcaatgtgcccaatcttagggtc
ctgactttgaagaaaagtctgaacagcacaactttgcacctggatcaatcgccattccag
cccctgtccaacctcacctacctggatctcagtaacaacaacatcgcgaacatcagacag
agtatgttaaaggggcttgagaacctgaaggtgctgaagctcccacataacaactttgcg
cggttgtggaaggacgccaacccaggtggaccggtgttgtttcttgaaggggcagagaag
ttgacgaccttatggatggacaacaacgggctagatgagatcccacaggaggcgctgaga
ggtttgacgaacctcagggagctaagcctctcaaacaatctcctcaacagtctcaaggac
tctgtgttcgacgatctgaagtccttgcaggtcttgcgtttacagaagaacctgatcaca
gctgtgaagcctgaagtgttcggcactcccatgagaaaactcagcctacttgtcattgac
aaaaatccctttgactgcacgtgtgagagcatcctgtggtttgtgacgtggttgaacagc
acaaacatgaccattgtgccagacctcagcgaccagtatatgtgcaacactccactcgcg
tactttaaccactcaatcatgcagtttgacaccctctcctgcaaagataacaccccattt
tatgctctttacttactgagcagcaccactgtcttgatgcttatggtaacggccctgttt
gtgcggttccacggctggaggattcagttctactggaacatactggtcagtcgcacgtta
ggatttagtgatgccagtgttgaggagggcagggaatttgagtatgacgcttacatcata
catgcggagagggacgccagatgggtggagagggtgatggtccccttggagaatgaaaac
tgcaagttttatttggaggatcgagatgcagtccctggggtgtcgctgctccagtccatc
atggagaacatgaggaggtccaggaaaatcgtgtttgtcgtcactgaaagtcttctcagg
gatccctggtgtagacgattcacagcccatcaagcactgcaccaggtgattgaggccagc
agggactctgtggttctggtcttcctgcaggatgtgcacgactacaagttatctcgcgca
ctcttcctccgcaggggcatgttgcgaccgcgttgtatcctggattggcccgaagataag
gagagggtgccggcctttcaccagaaactcctcatggcacttggcatgactaatagattt
agggactga
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