Hippoglossus stenolepis (Pacific halibut): 118124064
Help
Entry
118124064 CDS
T08308
Name
(RefSeq) globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 isoform X1
KO
K00722
globoside alpha-N-acetylgalactosaminyltransferase [EC:
2.4.1.88
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp00603
Glycosphingolipid biosynthesis - globo and isoglobo series
hsp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
118124064
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
hsp01003
]
118124064
Enzymes [BR:
hsp01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.88 globoside alpha-N-acetylgalactosaminyltransferase
118124064
Glycosyltransferases [BR:
hsp01003
]
Glycan extension
FORS blood group (Forssman antigen)
118124064
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_6
Motif
Other DBs
NCBI-GeneID:
118124064
NCBI-ProteinID:
XP_035037748
LinkDB
All DBs
Position
16:129156..137423
Genome browser
AA seq
320 aa
AA seq
DB search
MNLLNIKSVTVILLFVVLLGLLYSSVWQSCRVIDPFKQNQSLPAGSRTDVLTMTPWLAPV
VWEGTFNPVFLDSMYQTKNITIAATVFALGKYTMFLKNFLETMEQHFFTGFNVHLFVFTD
QPKEVPQVKMAGGRQLTVRTVPSFKSWQEITSRRMELIQTLIEDELRDYADYIFCLDVDS
QFHGRWGTESLGGLVAVVHPGYYKVDRSAFPYDRQPISKAYMAPGDGDFYYCGGAFGGVL
QEVHLLAKTCHLNLEDDATKGIHAAWQEESHLNRYMWINKPSKVLSPEYLWQDFKPKDPE
IHIIRFSGVVKNYAKIRPNI
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgttgaacattaaaagtgtgacagtgattctactgtttgttgtgctgctcgga
ctgttgtacagctcagtctggcagtcctgcagagttatagatccctttaaacagaatcag
agtttacctgcaggcagtcgtactgacgtgctgacgatgacgccctggttggctcctgtg
gtttgggagggaaccttcaacccggttttcctcgacagcatgtaccagacgaagaacatc
accatcgcagccactgtgttcgccctgggaaagtacaccatgttcctgaaaaactttctg
gagaccatggagcagcacttcttcactggtttcaatgtgcatctgttcgtcttcactgac
cagccaaaggaggtgccccaagtcaaaatggccggcggcagacagctgacggtgcgtaca
gtgcccagctttaagagttggcaggaaatcacttctcgcaggatggagctgatccagacc
ctaatagaggatgagcttcgtgactacgccgactacatcttctgtctggatgtggactcc
cagttccacggccgatggggcacggagtcactgggaggactggtcgctgtggtccatcca
ggttactacaaagtcgaccgcagcgcattcccctatgaccggcagcctatctccaaagcc
tacatggctcctggggacggggacttctactactgtgggggggcattcggaggcgtcctg
caggaagtacacctgcttgccaaaacctgccacttgaacttggaggatgatgctacaaaa
ggcatccatgcagcctggcaggaggagagtcacttaaacaggtatatgtggatcaataag
cccagtaaggttctgtcacctgagtacctgtggcaggactttaaacccaaagaccctgaa
attcacatcatcaggttctctggagttgtgaagaactacgcaaagatccgacccaatatc
tga
DBGET
integrated database retrieval system