Hippoglossus stenolepis (Pacific halibut): 118124080
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Entry
118124080 CDS
T08308
Name
(RefSeq) junction plakoglobin
KO
K10056
junction plakoglobin
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04382
Cornified envelope formation
hsp04519
Cadherin signaling
hsp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
118124080
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
118124080
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
118124080
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hsp04147
]
118124080
Exosome [BR:
hsp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
118124080
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
WRM1_C
ARM_PUB
BAR1_C
Cnd1
ARM_GAC_2
Adaptin_N
ARMC6
HEAT_2
ARMC9_ARM
Atx10homo_assoc
ARM_GAC_1st
Motif
Other DBs
NCBI-GeneID:
118124080
NCBI-ProteinID:
XP_035037771
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Position
16:21979734..22086886
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AA seq
752 aa
AA seq
DB search
MMSMQMSEADSMVKVAEWQQTYYASDSGIQSGATTVRDDESSTEYSGSKKYRGSTTTSTT
TAPTAASAGGGGDTAASGLESPSDLEAQYSLTRAQRVRAAMFPETLVEGEAAMPLQSDPS
QQSNVQRLAEPSQLLKTAIVHLINYQDDAELATRAVPELTKLLADEDPVVVNKAAMIVNQ
LTRKEASRRVLVQSPTMVGAVVRAMTTAVDMETARCAASVLHSLSHQREGLLAIFKSGGI
PALVRMLSSPVESVLFYAITTLHNLLLHQEGAKMALRLADGLQRMVPLLKKSNPKFLAIT
TDCLQLLSYGNQESKLIILANGGPEGLVFIMRNYNYEKLLWTTSRVLKVLSVCPSNKPAI
VEAGGMQALGQHLTGSSQRLIQNCLWTLRNLSDAATKQEGLDGLLQILVTQLGSDDVNML
TCATGILSNLTCNNSRNKTLVTQYGGVEALIHAVLRAGEKEDVAEPAVCALRHLTSRHQD
AELAQNAVRLHYGIPAVVKLLGQPHYWPVVKATVGLIRNLALCPANQAPLREAGAIPRLV
NLLLKAHQDTQRHASSTQQTYQDGVRMEEIVEGCTGALHILARDPMNRGDIASMQTIPLF
VQLLYSYVENVKRVSAGVLCELALDKQSAELIDAEGASAPLMELLHSSNEGIATYAAAVL
FRISEDKSSDYRKRVSVELTHSLFKHDPTAWEMAHTAVPLEPTYLTDELDGAYPSYGYTD
LPLDTLPLDPDLHEPYMQDMTYDPRQAYPEPL
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgatgtccatgcaaatgagtgaggcggacagtatggtgaaggtggccgagtggcagcag
acatactacgcctcagactctggcatccaatcaggagccaccacagtacgggatgatgag
agcagcacagagtacagtggcagtaagaagtatcgcggcagtacaacaaccagcacaacc
actgcccccaccgctgcctctgctggaggaggaggggacacagcagctagtggcctagag
agcccttcagatctagaagctcagtactcgcttacgcgggctcagcgagtcagggccgca
atgttcccagagaccctggtggagggagaggcagccatgccactccaatcagatccgtcg
cagcagagcaacgtgcagcgactggctgagccctctcagctgctgaagacagcaatcgtc
cacctgataaactaccaggatgatgctgagttggcaacaagggcagtgccagagctcacc
aagctgctggcagatgaggatccggttgtggtgaacaaggcggccatgatagtcaatcag
ctgacccgaaaggaggcaagtcggcgggttctagtacagtctccgaccatggtgggtgca
gtggtgcgcgccatgacaacagcagttgacatggagacagcccgttgtgcagccagcgtg
ctccacagcttgtcacaccagagggagggactgctggccatatttaagtctggagggata
cctgcactggtccgcatgctgagttccccagtggaatcagtcttgttttacgccatcacc
accctccacaacctactgctccaccaagagggggccaagatggctctgcgtctggctgat
ggcctgcaaagaatggttcccttactaaaaaagagcaatcccaagttcctggccatcacc
actgactgtctgcagctcctgtcctacggcaaccaggagagcaagctaatcatccttgcc
aatggaggcccagagggcctggtgttcatcatgaggaactacaactatgagaagctacta
tggaccactagccgtgttctcaaagtactgtctgtgtgtcccagcaacaagccagccata
gtggaggctggtggaatgcaagctttgggccaacaccttacaggttctagtcagcggctg
atccagaactgtctatggacactccgcaacctgtcagatgctgcgactaaacaggagggg
ttagatggtctgctgcagatattagtcacccagctgggctcagatgatgtcaacatgttg
acctgtgcaactggcatcctgtccaacctcacctgtaacaattcacgcaacaagactctc
gtgactcagtatggtggtgtggaagcactgatccatgctgtgctccgagcaggggagaag
gaggacgttgctgagccggcggtctgtgccctgcgtcacctcacatcccgacaccaagat
gcagagctggcccagaatgctgtgcgtctgcactatggtatccctgctgtcgtcaagctg
ctggggcagccacactactggcctgtagtaaaggccacagttggtttgatccggaacctg
gcactgtgcccagccaatcaagcgccactgagggaggcaggtgctattcctcgattggtc
aacctgctactgaaggctcaccaggacacgcagagacacgcctcctcgacacagcagaca
taccaggatggtgttcgcatggaggaaatagttgagggctgcacaggagcactccacatt
ctagcaagagacccaatgaacagaggagacatcgccagcatgcaaaccataccactgttt
gtacagctgctgtactcctatgtggagaacgtgaaacgagtgtctgcgggcgtcctgtgt
gagttggctctggacaaacagtcggcagagctcattgatgcagagggagcttcagcacca
ctcatggagctgctgcactccagcaacgaaggaatagccacctatgctgcagcagtgctg
ttccgaatttcagaggacaagagttcagactacaggaagagagtgtctgtggagctaaca
cactcgctctttaaacatgaccctaccgcatgggaaatggcccatactgcagttcccttg
gagccaacttacctaactgacgaattagatggcgcttacccttcttatggctacacggat
ctgcctctggacaccctgccgctagaccctgacctccatgagccctacatgcaagatatg
acgtatgacccaagacaggcctaccctgaaccactctaa
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