Hippoglossus stenolepis (Pacific halibut): 118124101
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Entry
118124101 CDS
T08308
Name
(RefSeq) xylosyltransferase 1
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
hsp00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
hsp01100
Metabolic pathways
Module
hsp_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
118124101
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
118124101
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
hsp01003
]
118124101
Enzymes [BR:
hsp01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
118124101
Glycosyltransferases [BR:
hsp01003
]
O-Glycan biosynthesis
Glycosaminoglycan
118124101
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xylo_C
Branch
Motif
Other DBs
NCBI-GeneID:
118124101
NCBI-ProteinID:
XP_035037805
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All DBs
Position
16:complement(994030..1012269)
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AA seq
909 aa
AA seq
DB search
MNPCSRRPARLRSGLLLAAVAALLLQTLVVWNFSSLDGGARSRERREERAAGEQPRWKRG
DPPPLLGKAAARHQLQADVYRSHRPKEKLPLDSNNNENSVPKDFDSIDSNSNLATRSQRQ
RAPVGNSKHKLDKVQSILGKSANEVLKLPPIQPRGIGPSRNHTHKMKPRPQTLPVPVRGS
NQDPALLRAKTPASQEPRKTQPQCEVSGKEAISALSRAKSRGCRQQIVEVYCKHKDGALL
PERVPRYCPLEGKANVNVQWDNDPANAPQLEPVRIAFVLVVHGRASRQFQRLFKAIYHTS
HYYYIHVDQRSNYLHREVLSLARQYSNVRVTPWRMSTIWGGASLLTMYLRSMEDLLNMTD
WSWDFFINLSGADYPIRTNELLVSFLSKYRNMNFIKSHGRDNARFIRKQGLDRLFYECDT
HMWRLGDRKIPEGIAVDGGSDWFLLNRPFVDYVVNSRDELVGSMKRFYAYTLLPAESFFH
TVLENSALCGTMVDNNLRLTNWNRKLGCKCQYKHIVDWCGCSPNDFKPSDLPRFQQVSRP
TFFARKFEASVSQEIISQLDSFLFGALAPGTPGLQAYWENTYEQETDGPASLSDAALSHY
HAFARMGLSRAASSLQGHPNDNSCRFTAVSHPVSVHLYFLSDQFQGYLLRHVATNRASTQ
LETLETWVTPRDHFTLASPPHPTNRLQHVQVGGDWDPKERLFRNWGGMLGPKDEPVAVQR
WSRSQSNLTATVVWIDPTNVIAATYDILVDASAEVTHYRPPLTAPLRPGVWTLRVLHHWS
PLGQTSFIVAPLEFHKQQPIGLEDAQRLHAGPPRNSYMEQSFHGLNPVLRLPVSLGAVEE
AEANASLTGAPLRQWLDRLLEGHWSASDICSTGPSACPVMQRCRLTVWSSDSPDPKSDVS
APREDGRIR
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atgaacccgtgctcccgcaggccggcccggctccgctccgggctcctgctggcggctgtg
gccgcgctgctgctgcagaccctggtcgtgtggaacttcagcagcctggacggaggcgcc
aggagccgggagaggagagaggagcgcgccgccggggagcagccgcgctggaagaggggc
gacccgccgccgctgctcgggaaggcggccgctcgacaccagctgcaggcggacgtctac
cgttcccaccgtcccaaagagaaacttcccttggacagcaacaacaacgagaactctgtc
cccaaagacttcgactccatcgacagcaacagcaacctcgctacacgctcgcaacgccag
cgagcgccggtcggaaacagcaaacataagctggacaaagtgcagagcattctgggaaaa
tctgctaacgaggtcctgaagttgcctccgatccaacccagagggatcgggcccagtcgc
aaccacacccacaaaatgaaaccccgcccccagacgctcccggttccggtccgggggtcc
aatcaggatccagcgctcctccgggcaaagacgccggccagtcaggagccgaggaagacg
cagccgcagtgcgaggtcagcgggaaggaagccatctccgctctgtcccgagccaagagc
cgcgggtgtcgtcagcagatcgtggaggtttactgcaaacacaaggacggagcgctgctg
cccgagagagttcctcgctactgccccctggaagggaaggctaacgtgaacgtgcagtgg
gacaacgaccccgccaacgctccccagctcgagcccgtgcggatcgccttcgtcctggtc
gtccacggccgagcctcacgtcagttccagcgtctcttcaaagccatctaccacacctcc
cactactactacatccacgtggaccagaggtccaactacctccacagagaggtcctctct
ctggcccgacagtattccaatgtccgcgtcactccgtggcggatgtccaccatctggggc
ggagccagcctgttgaccatgtacctgcgcagcatggaggacctcctcaacatgaccgac
tggtcctgggacttcttcatcaacctgagtggagctgattacccaatcaggaccaacgag
ctgctggtgtcgttcctgtcaaagtatcgcaacatgaacttcatcaaatctcacgggcga
gacaacgcacgtttcatccggaaacagggtctggaccgactcttctacgagtgcgacacc
cacatgtggcgtctcggggaccgcaagatcccagagggcatagcggtggacggaggctcc
gattggttcctgctcaatcggccctttgtggattacgtggtcaactccagagacgagctg
gttggaagcatgaagcgcttctacgcctacacactgctgcccgctgagtccttctttcac
accgtgctggagaacagcgccctctgtggcaccatggtggataacaacctgaggctcacg
aactggaaccggaagctgggctgtaaatgtcagtacaagcacatcgtggactggtgtggc
tgctcccccaacgacttcaagccctcggacctgccgcgattccagcaagtgtccagaccc
acgttcttcgccaggaagtttgaagccagtgtcagtcaggagatcatcagccagctggac
tcgttcctgttcggagcgctggccccgggcacgccgggcctccaggcctactgggagaac
acctacgagcaggagacggacgggcccgccagcctgtcagacgctgcgctcagccactat
cacgccttcgctcgtatgggattatcacgtgctgccagctcgctgcagggacatcccaac
gacaacagctgcaggttcacggccgtgagccacccagtgtccgtgcacctctacttcctg
tcagaccagttccagggctacctcctgcgccatgtggccactaacagagcctccacccag
ctggagacgctggagacctgggtcacacccagagaccacttcaccctggccagccccccc
caccccaccaacagactgcagcatgtccaggtgggaggcgactgggacccgaaggagcgt
ctcttcaggaactggggggggatgctgggccccaaggacgagccggtggccgtgcagcgc
tggagccgcagccagagcaacctgacggccaccgtggtgtggatcgaccccaccaacgtc
atcgccgccacctacgacatcctggtggacgcctctgctgaggtcacacactaccggccg
ccgctcacggccccgctgaggcccggcgtgtggacgctgcgggtgctgcaccactggagc
ccgctcggccagaccagcttcatcgtggctccgctggagtttcacaaacaacagcccata
ggactcgaggacgctcagcggctgcacgccggcccgcccaggaactcctacatggagcag
agcttccacggcctcaacccagtgctgcggctgccggtgagcctgggcgccgtggaggag
gccgaggccaacgccagtctgacgggggcgccgctgcgtcagtggctggaccggttgctg
gaaggccactggtccgcctcggacatctgctccacgggccccagcgcctgtcccgtcatg
cagcggtgccgcctcacggtctggagctccgacagccccgaccccaagtccgacgtgagc
gcgcccagagaggacggacgcatcaggtag
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