Hippoglossus stenolepis (Pacific halibut): 118124315
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Entry
118124315 CDS
T08308
Symbol
rhbdl3
Name
(RefSeq) rhomboid-related protein 3 isoform X1
KO
K02857
rhomboid-related protein 1/2/3 [EC:
3.4.21.105
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hsp01002
]
118124315 (rhbdl3)
Enzymes [BR:
hsp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
118124315 (rhbdl3)
Peptidases and inhibitors [BR:
hsp01002
]
Serine peptidases
Family S54: Rhomboid family
118124315 (rhbdl3)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhomboid
EF-hand_7
EF-hand_6
EF-hand_1
DUF5580_M
EF-hand_11
AIF-1
Motif
Other DBs
NCBI-GeneID:
118124315
NCBI-ProteinID:
XP_047200203
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Position
2:complement(14424222..14476790)
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AA seq
414 aa
AA seq
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METSSPRMTAGPREAQVNCSPAVAANAEGEEIEVLESTDVLPVAPEDQWKSLFDKYDPEN
SGFISTERFRDLLAAHGSELDPHKLEVLLALTNGNADGKICYQDFVNLMSNKRSNSFRRA
ILQGSRQLKGCSLRDEVGLGLSQRLVRHVAYETLPREVDRKWYFDSYTYCPPPLLILAIT
IAEVAVFMYYGFQLDRLVLQVSSPSFLKSPLPYHPQLRAQAWRYLSYSFMHTGIEHLSLN
MAMQLLVGVPLEMVHGALRIGLVYVCGVLAGSLAVSVTDMTAPVVGSSGGVYALVSAHLA
NVVMNWSGMKCQFKLFRMAMALVCMSVEFGRAVWLRFYPPAFPPCPNPSFVAHLGGVVVG
LTLGVVVLQNYEQRLQEQSLFWIFFCVYTLFVLCAVFWNIFAYSLLDVRLPPPP
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggagacgagcagcccgaggatgacggccggcccccgggaggcgcaggtgaactgctcc
ccggcggtggcggccaacgcggagggtgaggagatcgaggttttggaaagtaccgacgtc
cttccagtggctccagaggaccaatggaagtctctgtttgacaagtatgacccagagaac
tcgggcttcatcagtacagagcgattcagggaccttctggcggcacacggctccgagctc
gacccccacaaactggaagtcctgttggccctcaccaatggaaatgctgacggcaaaatc
tgctaccaggactttgtgaacctgatgagtaacaagcgctccaacagtttccggagggcc
atcctgcaggggagcaggcagctgaaaggctgcagtctcagggatgaggtcggcctgggg
ctctcgcaacggctggtccgacacgtcgcctatgagacgctgccccgcgaggtcgaccgc
aagtggtactttgacagctacacctactgccccccgccgctgctcattctggcgatcacc
atcgctgaggtggccgtgttcatgtactacgggttccagctggaccgcttggtcctgcag
gtgtctagcccgtcattcctaaagagccccttaccctaccacccccagctacgagcccag
gcctggaggtacctcagctacagtttcatgcacactggcattgaacacctaagcctcaac
atggccatgcagctgctggtgggagtcccactagaaatggtccacggagcgctgaggatc
ggactggtctacgtgtgtggtgtgctggcagggtcattggcggtgtccgtcacagatatg
acggctccagtggtcgggtcctctgggggagtgtacgcactggtctcagcgcacttggct
aatgttgtaatgaactggtcgggaatgaagtgtcagtttaagctgttccggatggcaatg
gctctggtgtgcatgagtgtagagtttggtcgggcggtgtggttgcggttctacccgccg
gcctttcctccctgccccaaccccagctttgtagcgcacctgggaggggtggtggtcggc
ctgacgctgggcgtggtggtcctgcagaactacgagcagcggctccaggaacagtccctg
ttttggatctttttctgcgtctacaccttgtttgttctttgcgccgtcttctggaacatt
ttcgcctacagcctgcttgatgtcagactgcccccgccgccttga
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