Hippoglossus stenolepis (Pacific halibut): 118124379
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Entry
118124379 CDS
T08308
Symbol
snrpd1
Name
(RefSeq) small nuclear ribonucleoprotein Sm D1
KO
K11087
small nuclear ribonucleoprotein D1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118124379 (snrpd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsp03041
]
118124379 (snrpd1)
03032 DNA replication proteins [BR:
hsp03032
]
118124379 (snrpd1)
Spliceosome [BR:
hsp03041
]
Complex A
U1 snRNP components
Sm proteins
118124379 (snrpd1)
U2 snRNP components
118124379 (snrpd1)
Complex B
U1 snRNP components
118124379 (snrpd1)
U4/U6.U5 tri-snRNP components
118124379 (snrpd1)
Complex C
U2 snRNP components
118124379 (snrpd1)
DNA replication proteins [BR:
hsp03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
118124379 (snrpd1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
EBNA2_Core
Gemin7
YomU_Tube
Hfq
SM-ATX
API5
AAA_RNF213_3
Motif
Other DBs
NCBI-GeneID:
118124379
NCBI-ProteinID:
XP_035037950
LinkDB
All DBs
Position
17:10321297..10324182
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AA seq
119 aa
AA seq
DB search
MKLVRFLMKLSHETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREPTQLESLSI
RGNNIRYFILPDSLPLDTLLVDIEPKVKSKKREAVAGRGRGRGRGRGRGRGRGRGGPRR
NT seq
360 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcgtcaggtttttgatgaaactcagccatgagacagtcactatcgaactgaag
aatggaacccaggtccacggcaccatcacaggtgtcgacgttagcatgaacactcacctg
aaggctgtgaaaatgactctgaaaaacagggagcccactcagctcgagtctcttagtatc
cgtggcaacaacattcgctacttcatcctgcctgacagtcttccactggacaccttgctg
gtcgacatcgagccaaaggtcaagtccaagaagagggaagccgtggctggccgtggacga
ggcagaggacgaggccgcggcagaggaaggggacgaggccgaggcggtccaaggagatga
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