KEGG   Hippoglossus stenolepis (Pacific halibut): 118124405
Entry
118124405         CDS       T08308                                 
Name
(RefSeq) LOW QUALITY PROTEIN: bromodomain-containing protein 4-like
  KO
K11722  bromodomain-containing protein 4
Organism
hsp  Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:hsp00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:hsp01001]
    118124405
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hsp03021]
    118124405
   03036 Chromosome and associated proteins [BR:hsp03036]
    118124405
Protein kinases [BR:hsp01001]
 Serine/threonine kinases: Other
  BRD family [OT]
   118124405
Transcription machinery [BR:hsp03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Brd4/P-TEFb complex
     118124405
Chromosome and associated proteins [BR:hsp03036]
 Eukaryotic type
  Chromatin remodeling factors
   Other chromatin remodeling factors
    118124405
SSDB
Motif
Pfam: Bromodomain BET BRD4_CDT
Other DBs
NCBI-GeneID: 118124405
NCBI-ProteinID: XP_047200347
LinkDB
Position
2:complement(25804484..25820799)
AA seq 1405 aa
MGDGLQAGNSQNPPSAPPPLAFNAPAPDTWDPSRPKRQTNQLEYLLKVVFKTVWKHHFAW
PFQAPVDAIKLNLPDYYKIIKIPMDMGTIKKRLESNYYWNAQECIQDFNTMFTNCYIYNK
PGDDIVLMAEALEKHFLQKITQMPQEETEIAVVTKGRRGGRRESALITKSDSGQDSSSPS
STPHTRGFSSPPTTPHTRPAPTPQGPPTLTLAQPLSQPLVQPVVQPLFQPLFQPLVQPLI
QPSIQPLLQPQPPPRVPPTPTSHTHLVTPFPLFPLSTTDVLAQGLTSVPPSAPTHPGLLP
VPMLQSSPALIKQRKSQKRKADTTTPTANDQLSESSPVSAEARPRRDSIRPLKQPKRDAS
QPDSQHHLVAGLETGGMAPMNRQEQLRSCARLVREMLSKKHAAYAWPFYKPVDAKALGLH
DYHDIIKHPMDLGTVKKKLDNKQYRDAQEFAAEVRMMFSNCYKYNPPDHDVVSMARKLQD
VFEMRFAKMPDEPEEPPPVPTPSSALHPAPSTRQAPPPSAVLAGESSTSSESESSGGGPE
HERQHRLAELQEQLKAVHEQLAALSQPQTIKPKKKEREKKEKKKEKHKKKMGVEETVEAP
PPVMLQTAKKSKSSKEPITVKKERKKPGKKEGVKNSRPTVPPQPGPTPLVPSASLEAEEE
IDVFGGVSTERGKPMSYEEKRQLSLDINKLPGDKLGRVVHIIQTREPSLKNSNPDEIEID
FETLKPSTLRELEKYVSSCLKKKKKTSVEKPLETTNVTKMKTGSSSSGSSDSSDSEDSEN
GLVPKQQKKTSTNKDIKRPHHQSLSSGVVPVPPQPQLQPQTQPQPQPQPQVVQSKLPFIA
PPPVPVPVPIPVPSLDTSQLLASGFDPLAHFMNPHLTQSNAEPNPTIAAAGVPVTAGLLN
TNTPSSQMATETHPFLNQHPIIPSPAIHNALPQQPSRPSNRAAPLPPKPPQPPPASLPSL
PPSSSPQLQPSLPLTLPQPVPRPRVPSPPSHGILGTLSAQPPXALLEDDEEPTPTSAETP
PLSQVHSFLQSLQPRPTTQTQPMHTHSPVQLMPSLHTPMALSTPALAQRHSSAPTLMQQP
FPHTSTLQQQKGVTLQQKVQQIQAQLQQQPSPPSKAEPFTTGCLRESPPPLMMHSPQMPQ
FHTVGHQSPPQTKKHEPRSNLVGVKEEKPSHSPVLPPSPFSPVMRQDSHKPDNKHNLKPL
DGSRPGSRLLDSPAPPCSQPDIKIKQEPKTPIAPKKTQEVKLKNMGSWASLVQRSQSTPA
SSVRSSSDSFEQFRRVAREKEEREKQLKAQAEQARKEQVKHRRDDDDTVEQARRAQEDAR
RRQETQSPLAPTPPASTPPTNSPQAPPAQPPPQPPSSSAAQNALDQQREMARRREQERRR
REAMADTIDINFQSDLMAIFEENLF
NT seq 4218 nt   +upstreamnt  +downstreamnt
atgggagacggactgcaggcaggcaacagccagaaccctccctctgccccaccccctctc
gccttcaacgccccagcacccgacacgtgggacccctccagacccaaacgacagaccaac
cagctggagtacctgcttaaagtggtgtttaagacggtatggaagcaccactttgcatgg
cccttccaggctcccgtagacgccatcaaactcaatttacctgactactacaagatcatc
aagattcctatggacatgggcacaataaagaaacgcctggagagcaactactactggaac
gcccaagagtgtatccaagacttcaacacgatgttcacaaactgctacatctacaacaag
ccgggggatgatatcgtcctaatggcggaggccttggaaaagcattttctccagaagatc
acacagatgccgcaggaggagacggagatcgctgtggtcaccaagggacggcgggggggc
cgacgggagtcagctctcatcacaaagtcagattcaggccaagactcgtcgtccccctct
tccacccctcatacacgaggcttttcatccccgccaaccaccccacacacccgtcctgca
cccacccctcaaggccctccgacattaaccctggcccagcctctctcgcagcccctggtc
cagcctgtagtccagcccttgttccagcccttgttccagcccttggtccagcccttgatc
caaccctcgatccaacctctactgcagcctcagcctcccccacgtgtgcctcctacaccc
acctcccacacccatctggtcaccccattccccctattccccctctcaaccacagacgtc
ctggcccaaggcctgacctctgttcccccttcagccccaacacacccaggcctcctaccc
gtcccgatgctgcagagttcccccgcccttatcaagcaaagaaagagccagaagaggaaa
gcagacaccaccacccccaccgccaacgaccagctcagtgaatcatctcctgtctccgcc
gaggctcggccacgtcgagacagcattcgtccgttgaagcaacccaaaagagacgcgtcg
cagccagattctcagcatcacctggtcgctggtttggagacgggagggatggcgccaatg
aatcgtcaggagcagctgcgttcctgtgcgcgcctcgtcagagagatgctgtccaagaaa
cacgcggcgtacgcctggcccttctacaagcctgttgatgctaaagctcttggcctccac
gactaccatgacatcatcaagcaccccatggatctcggcaccgtcaagaaaaagctggac
aacaaacagtacagagacgctcaagagtttgcagcagaggtccgaatgatgttctccaac
tgttacaagtacaatcccccggaccatgacgtggtctccatggcacgcaaattacaggac
gtgttcgagatgcgtttcgccaaaatgcccgatgagccagaggagcccccccctgttccc
accccgtcgtcggccctccaccctgccccctccactcgacaagccccgcctccttctgct
gtcttggcgggcgagagctccacctcctccgaatcggagtcctcgggaggaggcccagaa
cacgaaaggcaacatcgattggctgagttacaggaacagcttaaagctgtccacgaacaa
ctggcagcactctcccagccgcagaccattaagcccaagaaaaaagagagggagaagaaa
gagaagaagaaagagaagcacaagaagaagatgggagtagaggaaacagtggaggcccct
ccgcctgtgatgcttcagacggctaagaagagcaagagcagcaaggagccgatcactgtg
aagaaggaaaggaaaaagcctgggaagaaagaaggagtaaaaaacagccgcccgactgtt
cccccccagccggggccgacccctctcgtcccctcagcctctctcgaagcagaagaggaa
atagatgtatttgggggcgtgtccactgaaagaggcaagcctatgtcgtacgaggagaag
cgtcagctgagccttgacatcaacaaattgcccggcgacaaactgggccgcgtcgtgcac
ataatccaaacacgcgagccctcgctgaagaactccaacccggatgagatcgagatcgac
ttcgagacgctgaagccttccacgctgcgggagctggagaaatacgtctccagctgcctc
aagaagaagaaaaagacatcagtggagaaacctctggaaacgacaaatgtgactaagatg
aagacgggatcttcatcctcgggcagcagcgactcctctgatagtgaagactctgagaat
gggctggttcccaaacagcagaagaagacctcgaccaacaaagacatcaagcgaccacat
caccagtccctcagtagcggagttgtccctgtccctcctcagccgcagctgcagccgcag
actcagcctcagcctcagcctcagcctcaagtcgtccagtccaagctaccgttcatcgcc
cctccccctgtccccgtccccgtccccatccccgtcccatctctggacacctcccagctg
ctggcctcaggatttgatcctctggctcacttcatgaaccctcacctgacgcagtcgaac
gcggagccgaatccaaccattgctgctgctggtgtccccgtcaccgctggcctcctcaac
acaaacacacccagtagccagatggccactgagacgcatccgttcctcaaccaacatccc
atcatcccctcgccagcgatccacaatgctctgccccagcaaccatcaagacctagcaac
cgcgcagcaccgcttccccccaagcccccgcagcctcccccggcctcgctcccctccctg
cccccgtcctcctcaccccagcttcagccttcgcttcccctgacgcttccccagccggtc
ccccgtcctcgcgtcccctcacccccgtcgcacggcatcttgggcaccctctctgcacaa
cccccannagccttgctggaggacgacgaagagccgacacccaccagtgctgaaaccccg
cccctcagccaggtgcacagcttcctgcagtctctccagcctcgacccaccacgcagacg
cagcccatgcacacgcactcgcccgtgcagctgatgccgtcgttgcacacgcccatggcg
ctgtccacccctgccctggcgcagagacacagctctgcccccacgctcatgcagcagccg
ttcccgcacacgtcgacgttgcagcagcagaagggggtaacgctgcagcagaaggtacaa
cagattcaggcgcaactccaacagcagccgtcaccaccaagtaaagcagagcctttcaca
acaggttgcctgcgtgagagcccccctcccctgatgatgcactctcctcagatgcctcag
ttccacacagtcggacaccagtcaccgccacagaccaagaaacatgagccgaggtccaac
ctggtgggggtcaaagaggagaagccttcccactcgcccgttctgcccccctcccccttc
agtcctgtcatgcgtcaggattcacacaagcccgacaacaaacacaatctgaagccactg
gatggttctcgccctggttctcgcctcctcgactccccggcaccgccgtgctcccagcca
gacatcaaaatcaagcaggagcccaaaactcccatcgctcctaagaagacacaggaagtg
aagttaaagaacatgggttcctgggccagcctggttcagaggtcccagtccacgccggcc
tcctctgttcgctcctccagcgacagcttcgagcagttccgccgggtggcgagggagaag
gaggagagggagaaacagctgaaagcacaggctgaacaggccaggaaggagcaagtgaag
catcgccgtgacgacgacgacaccgtggagcaggctcgtcgagcgcaagaagacgcccgc
cgccgccaggagacacagtcgccgcttgctcccacacctccggcttctaccccgcccacc
aactctccacaggctccccccgcacagcctccaccccagccgccgtcctcctcggctgca
cagaacgccctcgaccagcagagggagatggcgcgccgccgtgagcaggagaggcgcagg
agagaggcgatggcggacaccatcgacatcaacttccagagtgacctgatggccattttt
gaagagaacctgttctga

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