Hippoglossus stenolepis (Pacific halibut): 118124409
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Entry
118124409 CDS
T08308
Symbol
cul4a
Name
(RefSeq) cullin-4A isoform X1
KO
K10609
cullin 4
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03420
Nucleotide excision repair
hsp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
118124409 (cul4a)
09124 Replication and repair
03420 Nucleotide excision repair
118124409 (cul4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsp04121
]
118124409 (cul4a)
03400 DNA repair and recombination proteins [BR:
hsp03400
]
118124409 (cul4a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hsp04147
]
118124409 (cul4a)
Ubiquitin system [BR:
hsp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
118124409 (cul4a)
DNA repair and recombination proteins [BR:
hsp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
118124409 (cul4a)
TCR (transcription coupled repair) factors
Cul4-CSA complex
118124409 (cul4a)
Exosome [BR:
hsp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
118124409 (cul4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Motif
Other DBs
NCBI-GeneID:
118124409
NCBI-ProteinID:
XP_035038083
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All DBs
Position
1:10439601..10447056
Genome browser
AA seq
757 aa
AA seq
DB search
MAEDTRQDKRASFSAITEHNTNGMGRTSAVASGKSGASKKLVIKNFKDRPKLAENYTEDT
WLKLRDAVGAIQNSTSIKYNLEELYQAVENLCSYKVSPTLYKQLRQVCEDHVQAQIYQFR
EESLDNLSFLKRMNRCWQDHCRQTIMIRSIFLFLDRTYVLQNSLLPSIWDTGLELFRTHI
VSDSAVQKRTVDGILEQVEQERNGETVDRSLLRSLLGMLSDLQVYKDSFEERFLIETNRL
YAAEGQRLMQERDVPEYLHHVARRLEEENDRILSYLDQSTQKPLISCVEKQLLGEHMTSM
LQKGLSTLLDENRVTELALLYQLFSKVKGGLPTLLQFWRDYIKTFGGEIVCTPEKDKDMV
QELLDFKDKMDNVAQSCFTRSEGFINAMKEAFETFINKRPNKPAELIAKYVDSKLRAGNK
EATEEELERILDKIMIIFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHE
CGAAFTSKLEGMFKDMELSKDIMIQFKQYMQNQSEPSNIELTVNILTMGYWPSYTPMEVH
LPPEMVKLQEVFKLFYLGKHSGRKLQWQPTLGHAVLKAEFKEGKKELQVSLFQTLVLLMF
NEGEEFSIDEIRTATGIEEGELKRTLQSLACGKARVLNKNPRGKDVEDGDRFNFNNDFKH
KLFRIKINQIQMKETVEEQVSTTERVFQDRQYQIDAAVVRIMKMRKTLSHNLLVSELYNQ
LKFPVKPGDLKKRIESLIDRDYMERDKETPNQYHYVA
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggacactcgacaggacaagagagccagcttctctgccataacagagcacaac
accaacgggatgggccggacctccgccgtggcctcaggcaaaagtggtgcctcaaagaag
ttagtgatcaaaaatttcaaagacaggccaaaactagcagagaactacactgaagacaca
tggctgaagctacgagatgcggtgggagccattcagaacagcacctctataaagtacaac
ctggaggagctctatcaggcggtggagaacctgtgttcctataaagtctcccccacgcta
tacaagcagctccggcaggtctgtgaagatcatgtgcaagcccagatctaccagttcaga
gaagagtctttggacaacctttccttccttaagcgaatgaatcgctgctggcaggaccac
tgcagacaaactataatgatccgaagtatctttctcttcctggatcgtacctacgtgctt
cagaattctctcctcccctccatatgggacactggcttggagctgttccgtacccacatt
gtgagtgacagtgcagtgcagaagcggaccgtcgatggcattttggagcaggtagaacag
gagcggaacggggagacagtggatcgtagtctgctcaggagcctattgggcatgttgtca
gacctgcaggtttacaaagattcctttgaagagagatttttgattgagaccaatcgtctt
tacgcagcagagggtcagcggctgatgcaggagagagatgtgcctgagtatctgcatcat
gtggctcgtcggttagaggaggagaatgatcgtatcttgagctacctcgaccagagcact
cagaaacctctaattagctgtgttgagaaacaacttttaggagaacatatgacttcaatg
ctacaaaagggtctgagcaccctgctggatgagaatcgtgtgactgagctggccctcctc
taccagctcttcagcaaggtgaaggggggacttcccacactgctgcagttctggagggat
tatatcaagaccttcggtggagagattgtgtgcactccagagaaagacaaggacatggtg
caagagctgctggactttaaggacaagatggacaacgtggcacagagctgcttcacgagg
agcgagggattcatcaacgccatgaaggaagcctttgagacttttatcaacaagaggccg
aacaaacctgcagaactcattgctaaatatgtggattctaagttaagagcagggaacaag
gaggctacagaggaggagctggagagaatcctggacaagataatgataatcttccgtttc
attcatggtaaagacgtgtttgaagctttttataagaaggacttggccaaacgcctgctt
gtcggcaagagtgcttctgtagatgctgaaaagtccatgctctccaaactcaagcacgaa
tgcggagcagcattcaccagtaagcttgaggggatgtttaaggacatggagctgtccaaa
gacatcatgatccagttcaaacagtatatgcagaaccagagtgaacccagcaacatagaa
cttacagttaacatcctcacgatgggctactggccgtcatacacgcccatggaggtccac
ttgcccccagagatggtcaaactccaggaggtgttcaagctgttctacctggggaagcac
agtgggaggaagctgcagtggcagccaaccctgggtcacgctgtattaaaggcagagttt
aaagagggcaaaaaggagctgcaggtctccctgttccagactctggtgctgctgatgttt
aatgagggagaggagttcagcattgatgagattcgcactgcgaccggcatagaggaggga
gagctcaagcgtacactgcagtccctggcctgcggaaaagctcgagtccttaacaagaac
cctcgagggaaagatgtggaggacggagaccgctttaatttcaacaatgattttaaacac
aaactgttccgcatcaagatcaaccagatccagatgaaggagacggtagaggagcaggtg
agcacaacagaacgtgtgtttcaagaccgacagtatcagattgatgcggctgttgtccgc
atcatgaagatgaggaagaccctgagtcacaacctcctcgtatcagagctctacaaccag
ctgaagttccctgttaagccgggcgatcttaagaagcgcattgagtcgctcatagacaga
gactacatggaacgtgacaaggagactccaaaccagtaccactatgttgcctaa
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integrated database retrieval system
