Hippoglossus stenolepis (Pacific halibut): 118124426
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Entry
118124426 CDS
T08308
Symbol
vars2
Name
(RefSeq) valine--tRNA ligase, mitochondrial isoform X1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
118124426 (vars2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hsp01007
]
118124426 (vars2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hsp03016
]
118124426 (vars2)
Enzymes [BR:
hsp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
118124426 (vars2)
Amino acid related enzymes [BR:
hsp01007
]
Aminoacyl-tRNA synthetase
Class I (U)
118124426 (vars2)
Transfer RNA biogenesis [BR:
hsp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
118124426 (vars2)
Prokaryotic type
118124426 (vars2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
Val_tRNA-synt_C
HR1
NPV_P10
Motif
Other DBs
NCBI-GeneID:
118124426
NCBI-ProteinID:
XP_035038087
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All DBs
Position
17:21907739..21928686
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AA seq
1112 aa
AA seq
DB search
MWCRYGWSRSTRFFGPHTAVRGGLLTWRLGRAEHLSEMWRAGRVLRVRLVSRGAARLCSS
NPPNTSPSSKSPPRVQAEKQRRRREREQAILSSQHSSAEDKPVKWTEKQRILYTAPTLPG
TKKDTSLPFPTSYSPEYVESSWYQWWEKEGFFSPEQHERLPHAVDRTFSLCIPPPNVTGT
LHLGHALTVAVEDALVRRKRMQGYRVLWVPGCDHAGIATQTVVERRLLREEGKHRHDFTR
EEFLQQVWKWKNDKGEEIYRQLRSLGASLDWSRACFTMDPCFSRAVTEAFVKLCDLGLIY
RSEGLVNWSCALESAISDIEVDSKELSGPTMLSVPGYENKVEFGTMFTFAYPIDNHDEEV
MVSTTRPETMLGDVAIAVHPDDPRYQAVNGKQCRHPFTNRLLPIITDSMVDMELGTGAVK
VTPAHDHSDFLLSQRHSLPRLTVIRGDGTMTPPCGQWLEGVKRFDARQFVVDALVERKLF
RGKKSHAMTLPICSRSGDIIEPLLKKQWFVRCDQMAKKAVQAVEDGQLQIIPDFYTKTWK
TWLSNISDWCISRQLWWGHQIPAYQVELPNCTDTKEERWVWGRSEDEARQRAAIRYGVRP
EAVTLTQDPDVLDTWFSSGLFPFAMLGWPEQTTDLQHYYPISILETGNDLIFFWVARMVM
LGTELTGQLPFKQVLFHSLVRDNHGRKMSKSLGNVIDPLDVIHGVSLERLQEKVMEGNLD
PREQLVAIEAQRKDFPKGIPQCGTDALRFALCSHKMQGEDISLSVSQVLSCRHFCNKMWQ
TLRFTLGVLGHITAPVASLEETTPLSSMDRWICSRLYSTVLQCEQAFEAYELHTVTSALY
SFWVHSLCDVYMEHVKPVLVQDEGAVVQPDTEGSDSTRHVATSVLYHCVSVSLALLSPFM
PFITEELWQRLQPFRHGAASQTSLSLQPYPCSSQLAHWHFPEEESAFLLIQEVIRTARSL
RAQCGMTKDKPAMWAVCSPSQAQVLLHFGSAVWTLSRTSCLHIYCPQGSDNLHSTPPPEG
SLIGVVDHSCQLHLHVQSGVNVEKQILQLSQRRDKLVPKLKEILCKVQSPNFLTKVPAHV
RQKVDHKMSALQQELKTIEDQLKMLQENQTTE
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atgtggtgtcgttatggctggagccgctcaactcggttctttggaccacacacagctgta
cgtggagggctgctgacctggcgactcggacgtgctgaacaccttagtgagatgtggagg
gcaggtcgtgtcctccgcgtgaggctagtgagcagaggagccgccagactctgttcgagt
aatccaccaaacacttcaccatcctctaaatctcctcctcgggtccaagctgagaagcag
aggcgtagacgagagcgggaacaggccatactgtcaagtcagcacagttctgctgaggat
aaaccagtaaaatggactgagaagcagaggatcttgtacactgctccaactcttcctggc
acaaagaaagacaccagcctgccattcccaacctcatacagtccagagtatgtggagtcc
agctggtatcagtggtgggagaaagaaggattcttcagtccagagcaacatgagagatta
cctcacgctgtggatcggaccttctctctgtgcatccctccaccaaacgtgactggtact
ctgcacctgggccatgctctgactgtggctgtagaagacgctctggttcgaaggaaaagg
atgcagggctacagagtgctttgggttccaggatgtgaccatgcaggtattgcaacacag
actgtggtggagagaagactgctgagggaagaggggaagcatagacacgacttcaccagg
gaggagtttctacaacaggtgtggaagtggaagaatgacaaaggagaagagatctacaga
cagctgaggagcctcggtgcttctctggactggagcagagcctgtttcaccatggatcca
tgtttcagccgggctgtgactgaggccttcgtcaagctgtgcgacttgggtctgatttat
cgctcagagggtttggtcaactggagctgtgcactggaatctgccatctctgacatagag
gttgactcaaaggagctgtctgggccgaccatgttgtctgttcctggttatgaaaacaag
gttgagtttggtacaatgtttacctttgcttaccccatagataaccacgatgaagaggtg
atggtgtccaccacccgtcctgagactatgctgggagatgtagctattgctgttcatcca
gatgatcctcgttatcaggctgttaatgggaagcagtgcagacaccccttcaccaacaga
ctcctgcccatcatcactgattctatggtggacatggagcttggaacaggtgcagtgaag
gtgacacctgctcatgaccacagtgacttcctgctgtcacagaggcattcactgccacgc
ctcactgtcattcgaggtgatggcaccatgacacccccctgtggccagtggctggaggga
gtgaagcgttttgatgccaggcagtttgttgtggatgcactggttgagaggaagcttttc
agaggaaagaagagtcatgccatgactttacccatctgcagccgttcaggagacatcatt
gaacctcttctaaagaagcagtggttcgtccgctgtgatcaaatggctaaaaaagctgta
caggcagtggaggacggacagctgcaaatcatccctgacttctacaccaagacctggaag
acgtggctgtccaacatcagtgattggtgcatttccaggcagctttggtggggtcatcag
atccctgcttaccaagtggagcttcccaattgtactgacacaaaagaggagcggtgggtt
tggggacggagcgaggatgaagcgcgacagagagctgctatcagatatggagtgcgtccg
gaggccgtcactttgactcaagaccctgatgtcttggatacgtggttctcctcaggcctg
tttcccttcgccatgcttggctggccagaacagaccactgaccttcagcactactacccc
atctctattctggagacaggcaatgacctcatcttcttctgggtggcaagaatggtaatg
ctgggcacagagctgacaggacaactgcccttcaagcaggtgctgtttcactctctggtg
agagataatcatggaagaaaaatgagtaaatctcttggaaatgtcatcgacccattagat
gtaattcatggagtgtctctggagagacttcaggagaaagtgatggaagggaaccttgac
cccagggagcagctggttgccatagaagcacagaggaaggacttccctaaggggatccct
caatgtggaacggacgctctgagattcgccctttgctcacacaagatgcagggagaagac
atcagtttgtccgtctctcaggtactgagctgcagacacttttgcaacaaaatgtggcaa
acgctaagattcacactgggagtgctgggtcacattacagccccagtggcatccctggaa
gagacaactcctctgagcagcatggaccggtggatttgctccagactctacagcacagtg
ttacagtgtgagcaggcttttgaagcctatgagttacacactgtcacatctgccttgtac
tccttctgggtccacagcctgtgtgatgtctacatggagcatgtgaagcctgtgttggtc
caggatgagggggcagtggtccagcctgacacagagggaagtgacagcacgaggcatgtg
gccaccagtgtcctctaccactgtgtgtctgtgtctctagccttgctctcccccttcatg
cccttcatcactgaggagctgtggcagagactccagccgttcagacatggagctgcttcc
cagaccagcctgtctttacaaccatacccttgctcctctcagctggcacactggcatttc
cctgaagaggaaagtgcttttctgctgattcaggaagtgatccgaacagcccgctcacta
cgagctcagtgtggcatgaccaaagataaacctgccatgtgggcagtgtgctcacccagt
caggcccaagtcctccttcactttgggtcagctgtttggactttaagccggacctcgtgc
ctccatatctactgtcctcagggatcagacaacctccactccactcctccacctgaagga
agcctcatcggtgtggtggaccactcatgtcagctacaccttcacgttcagagtggagtg
aacgtagagaaacagatcctgcagctctcccagcgcagagacaagcttgttccaaagttg
aaggaaattctctgcaaagtccaatctccaaacttcctgaccaaggttcctgctcatgtc
aggcagaaggtggaccataagatgtccgccttgcaacaggaactgaaaaccattgaggac
cagctgaagatgctgcaagagaatcaaacaacagaataa
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