Hippoglossus stenolepis (Pacific halibut): 118124442
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Entry
118124442 CDS
T08308
Symbol
tbc1d5
Name
(RefSeq) TBC1 domain family member 5 isoform X1
KO
K18469
TBC1 domain family member 5
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118124442 (tbc1d5)
Membrane trafficking [BR:
hsp04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
118124442 (tbc1d5)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
118124442
NCBI-ProteinID:
XP_047200051
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Position
17:13185049..13203699
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AA seq
884 aa
AA seq
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MQHPNFETRHPLQTEEQQETGFDPLQNFNKNRSRGSLDSSTYSQSQSTFLSYRNEWDDLF
LNSNYLARIRQAGINGRLRSSRFRSVCWKLYLEALPEDKGQWINKTKELRAQYEKIKDTH
ITNPRKAAGQQDLVVNNPLSQDEGSLWNKFFQDKELKGMVKQDVLRTFPEIRYFQDEDVR
AKLTDILFCYARENEQLLYKQGMHELLAPIVFVLHCDHQAFQHASETASPSEEMKCLLNP
EYLEHDAYAMFSQLMDTAEPWFSSFEREVRKGKEEMLTSIPFARPQDSGPSVAIVTKVNR
IQDQLVKKHDVELHMHVNRLEIAPQIYGIRWVRLLFGREFPLQDLLVVWDALFADSITLD
LVDYIFVAMLLYIRDALIASNFQTCLGLLMHYPPLGDINSLLQKALFLRDPKNNPRPVNY
QFQQNLDYYKTRGADLMNKTRSSTKTAPLNINKVSSSLLSFGRKLIAPAILGGSGGISPI
NSEVHSSSSSSSSTSPASAPAPALPHPLAEPPSANAPSQTQSHAQNQHYRLLKSESMPVH
LSKDAVSGGASQVSLPAPTHTDTQGQSSRTVSSSPSIESLSGGRAQSTASPPLPPSRGSD
VSTSSPPLSATKKDSFFNITRSRSHSKTMGKKESVSCSEDDLEAQVSFLQGQINDLEAMS
KFCAKMMNNHICKIQEVILQENLEKEDEVLVSLAGLKQIKDILKGALRFNQSQLEAEENE
QITIADDHYTATAAAEKALAALNHHGDRQQKESSRQSRDSDLDGSVSTDEKEEEEEEQAT
TPPEQQVASFHGSEVKNWDDYILVSQDGDLQPPEGGGAGGEKAAAEQTPPIRRGRGLVRM
EPEGAAGTFHDPLMAAIASGSSSPDEGSTHSKDSDFTIVNPNDL
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgcagcatcccaattttgaaactcgccatccgctccagacagaagagcagcaggagacg
gggttcgacccgctacaaaatttcaacaagaaccgcagcagaggatctcttgacagcagc
acttactcacagtctcagtcaaccttcctctcatacaggaatgaatgggacgacctgttc
ctcaacagtaattacctggccaggatccggcaggcaggcatcaacggtcgactgaggagc
agccgctttcggagcgtctgctggaagttgtacctggaggctcttcctgaagacaagggg
cagtggatcaacaagaccaaggagctccgggcccagtatgagaagatcaaagacacgcac
atcaccaaccctcgcaaggctgcaggccagcaggacctggtggtcaacaaccctctgtct
caggatgaggggagtctgtggaataagttcttccaggataaagagctgaaggggatggtc
aaacaggatgtgttgagaacgttccctgagatccgttacttccaggatgaggatgtgagg
gccaagctgacggacattctcttctgttatgccagagaaaatgaacagttgctgtataaa
caggggatgcatgagctgctggctcccatagtgttcgtgctgcactgcgatcatcaagct
ttccagcatgccagcgagacggccagccccagtgaggagatgaagtgtttgttgaaccca
gagtacctggagcacgatgcctatgccatgttctcacagctaatggatacagcagagccg
tggttctccagcttcgagagagaagtcaggaagggtaaggaggagatgctgaccagcatc
ccattcgctcggccccaggactcaggaccatctgttgccatagtgaccaaagttaaccgc
atccaggaccagctggtgaagaagcacgacgtggagctgcacatgcacgtaaaccggctg
gagatagccccacaaatttatggcatccggtgggtgcgcctgctgtttggtcgtgagttc
ccgctccaggacctgctggtggtgtgggacgccctgtttgctgacagcatcactctggac
ctggtggactacatctttgtggccatgctgctctacatccgggatgctctcattgctagt
aacttccagacctgcctgggcctgctaatgcactaccctccattaggagacatcaattct
ctgctccaaaaggctctcttccttcgagatcccaaaaacaacccacggcctgtgaactac
cagtttcagcagaacctggattactataaaacaaggggagctgacctgatgaacaagaca
cgttccagtacaaaaacggcccccctcaacatcaacaaggtctccagcagcctgctgagc
tttggcaggaagctgatcgctccggccatattgggtgggtccggcgggatctcgccaatc
aacagcgaagtacactcctcctcttcctcctcctcatctacttcccccgcctcggcccct
gcacccgccctgcctcacccactcgccgagccgccgtcggcaaacgctccatcgcagacc
cagagccacgcccagaatcagcactatcgcctgctcaagtccgagagcatgcccgtccat
ctcagcaaagatgcagtttcaggtggagcgtctcaggtctccctcccagccccgactcac
actgacacacaagggcaaagctccaggacggtcagttcctctccgagcatagaaagtctc
tccggtgggcgggctcagtccaccgcctctccgccccttcctccctccagaggcagtgac
gtcagcacttcctcacctccgctctctgccaccaagaaagactctttcttcaacatcact
cgctctcgctcccacagcaagacaatgggcaagaaggagtcggtgagctgttcggaggat
gatctggaagcccaggtgtctttcctgcagggacagatcaacgacctggaagccatgagc
aaattctgtgccaagatgatgaacaaccacatctgcaaaatccaggaagttattctgcaa
gaaaacctggagaaagaggatgaggtcctggtgtcactagctggtctcaaacagatcaaa
gacatcctgaagggggcgctgcgcttcaaccaaagccagctggaggcggaggaaaacgag
cagatcaccattgccgatgatcactacaccgccactgcggctgctgagaaggctctagct
gccctcaatcaccatggcgaccgccaacagaaagaaagcagcaggcagagccgggattcc
gatctggacggcagcgtgagcacggacgagaaagaggaggaggaggaggagcaggccacg
acgccacctgagcaacaggtggcgtctttccacggctcagaggttaaaaactgggacgac
tacatccttgtgtcccaggatggggacctgcagcctcctgaggggggaggagccggagga
gaaaaggccgcagctgagcagacccctccgatcaggcgagggcgcggcctggtgcgcatg
gaacccgagggcgcagctgggaccttccacgacccgctgatggccgccatcgcctcgggc
tcctcgagcccggacgagggctccacccacagcaaggactctgacttcaccatcgtgaac
ccgaacgacctgtga
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