Hippoglossus stenolepis (Pacific halibut): 118124454
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Entry
118124454 CDS
T08308
Symbol
rims2b
Name
(RefSeq) regulating synaptic membrane exocytosis protein 2 isoform X4
KO
K15297
regulating synaptic membrane exocytosis protein 2
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118124454 (rims2b)
Membrane trafficking [BR:
hsp04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
118124454 (rims2b)
Small GTPases and associated proteins
Rab associated proteins
118124454 (rims2b)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
C2
RIM2a_ZnF
PDZ
PDZ_6
FYVE_2
Motif
Other DBs
NCBI-GeneID:
118124454
NCBI-ProteinID:
XP_035038157
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Position
17:complement(2668415..2694205)
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AA seq
1640 aa
AA seq
DB search
MNHSRWPTFGFSLPLYFLSADSLCHLDRWNLLSGFSQLVNNVAANVSEVLQVKSPTDDES
QTKLHQQFEMYKDQVKKLGEEPQAAQTARAESLTCGICRITKFADGCGRACCYCQSRFCA
RCGGRVPLRANKVMWVCNVCRRKQEILTQSGEFHSNTTLLSVNHTSQGLPEGTRPLSNGD
TERRRSPSGSNYDGGGDLGLDYSTHLSQGYHGNGEAALRAQRRPIRDRRGRWHSQDHPLD
KDLDARELRRRQEEEFQARYRSDPNLARYPVKPQPSEEAMRMLAQVGRVRHQRRHSDVSL
ATAEPDHLTLRHTVHRHNRPQGLFGSEGQRSFSVDRASNHMSPTSPRRSPLPQQHLDPSS
AHKRKPANESMVQRGRGMGKMHVIGSFSSSEEELVTTPEYTSCDEPDRDMDSQWWDHGSW
HGEPVPMSMHPVTWQTSKDGERLIGRILLNKRMKDGTVPADTGALLGLKVVGGKMTESGR
LCAFITKVKRGSLADTVGHLRPGDQVLEWNGRVLQGATFNEVYNIILESKPEPQVELVVS
RPIGDVSRASDGSHIQLDSSSSSFDSQKVGPSISVTSPMSPSVLSGQVSTVNRRPLVPRI
QVKLWYDKVGHQLIVTVLGAKELPSQDDGRPRNPYVKIYFLPDRSDKSKRRTKTVKKSLE
PRWNQTFMYSPVHRREFRERMLELTVWDQARLREEESQFLGEVLIELESALLDDQPHWYK
LQLHDGSSLPLPSASPYLQRRGLQPEHSQTSRRLQNKGPYCYSGSQRISDSEFSDYDCED
GIGVISDYRQNGRDFHSSTLSVPEQVMSTNHCSRSDLVRMRSRSPSQPPPHSGNPLYPLY
REDAVRLLRGSKLSRAYSDAGQYSSLDRRSLRKMSVTNSLDSHDRYMNGPYHAPWTNPMM
NGNCEDYSQDFIPDFPYEPDTYDEELHRYSRGMDRRYYYSRSRSADQRAMADQPLYTRSH
STDRSDFVHLRSGRSAPPSPACTRANPQSGSTQTSPSGTPVCGRRVRQLPIVPPKGALDR
ILATSTTGAPPAAPPTAHIQTPPIGIQPLPPLIRIQAPPPPGTVQPHPPPSPAPIPVPAP
AHEPVHANAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAHAPAPAPAPAPAPAPAPAPAH
AHAHAPAHAPAPAPSVGAPSPAPTILPTSTPAPPASPAQPTHTTATQAPPPVLAPMPAPL
PAPVVQSQSPLEPALPPAPTPTPAPSPAPPPQTPEPEICSATSGGTRKEVTWEDQQKKAA
NGVMTDPSKMRDSLSFKSSDSDVSDVSAMSNASDTRSVRRISRSEALEGQSVELGAGTEG
KQEVAAEGGALLQKSESMEEAEEEEEEEEAKPSKPAPAAGAPLMKSSSVGGEICSLGRND
DDDDDKKRRSSFGARMMGMVGLGKKSQSASQLNPEEEEKKKKVVRLPVQRSIETGLAVEF
KSRFTRQPSRDPDADDPKPGALIFPGVKLATDQQFTGFLEGLGPAQLAGRQTLATPPMGD
IQIGMVFRKERLDVEVIRARGLVGKQGNKNTPAPYVKVYLMDNGKCVLKRRTRLARKTLD
PLYQQQLQFEENPEGKVLQIIVWGDYGRMDHKSFMGAAQILLDDLDLSNMVIGWFKLFPA
TSLVDPALAPLTNKETEGKS
NT seq
4923 nt
NT seq
+upstream
nt +downstream
nt
atgaatcactccagatggccgacatttggattcagcctccccctctacttcctgtcagct
gattctctgtgtcacctggacaggtggaatctgttgtcggggttcagtcagttggtcaat
aacgttgccgccaatgtgtccgaagttctgcaggttaaaagtccaactgacgacgagtcg
cagacgaagttacatcagcagtttgagatgtataaggaccaggtgaagaagctgggggag
gagcctcaggccgctcagacagcgagggcggagtctctgacctgtggcatctgtcgcata
acgaagttcgctgatggctgcggccgagcgtgctgctactgtcagagccgcttctgtgcc
cgctgcggggggcgggttcctctcagagccaataaggtgatgtgggtttgtaacgtgtgc
aggaggaagcaggagattctcactcagtcgggcgagtttcattccaacacaacgttgctg
tctgtcaaccacacgtcacaggggttgccggagggaacaaggcccttgagcaacggagac
acagagcggcggcggagcccctcagggtctaattacgatggtgggggcgacctcggtctg
gactactccactcacttgtcacagggttaccatggcaacggggaggcggctctacgggct
cagaggcgaccaatcagagacagacgaggccgctggcactcacaggaccatcctctggac
aaggacctggacgctcgtgagctgcggcggcggcaggaagaagagtttcaggcccgttac
cgtagtgacccaaacctggctcgttatccggtgaagccgcagccaagtgaggaggccatg
agaatgttagctcaagtcggcagggtccgtcatcagcgtcgccacagtgacgtctccctg
gcaactgctgagcctgaccacctgaccctgagacacacagttcaccgtcacaatcgacct
cagggattgttcggatctgaaggtcagaggtcattctctgtggaccgggcatctaatcac
atgagccccacgtctccccgccgcagcccattaccgcagcaacacctggacccgagctcc
gcccataagaggaagccagccaatgagagcatggtgcagagagggcgggggatggggaag
atgcacgtgattggtagcttcagcagctctgaggaggagctagtgaccactccagagtac
accagctgtgacgagcctgacagagacatggacagccaatggtgggatcatggttcctgg
catggcgagcctgtgcccatgtctatgcatccggtcacatggcaaacgtccaaggatgga
gagcgtctgattggtcgaattcttctgaacaagaggatgaaggacgggacagttcctgcg
gatacgggagcgctgctgggactcaaggttgttggtgggaagatgacggagtctggtcgt
ctctgtgcgttcatcaccaaggtgaagagaggaagtctggctgacactgtgggacacctg
agaccaggtgatcaggttctggagtggaacggcagggttcttcagggagccacgtttaat
gaagtttataacatcatcctggagtctaaaccagaaccacaggtggagctggtggtgtcc
cgacccatcggagacgtttccagggcttcagatgggtcccacatccagctggactccagt
tccagttccttcgactcacagaaagtcggcccgtccatctcagtcacatctcccatgagc
cccagtgttctctctggacaagtctcgactgtgaacaggcgtcctctggttcccagaatt
caggtgaagctctggtacgataaagtcggtcatcagctaatcgtcacagttcttggagcc
aaagaacttccctcccaagatgacggccgacccaggaacccttacgtcaagatatacttc
ctgcctgacagaagtgataaaagtaagcggaggacgaagacggtaaagaagtcgttggaa
cctcggtggaatcagactttcatgtactctccggtccaccggcgggagttcagagaacga
atgctggagctgacagtctgggatcaggcccggctcagagaggaggagagtcagttcctg
ggagaggtgctgattgaactggagtctgctctgttggacgatcagcctcactggtacaag
ctacagcttcacgatggttcctctctgccactgcccagtgcctccccctacctgcagagg
agaggactgcagcctgaacacagtcagaccagcaggaggctgcagaataaaggtccttac
tgttactcagggtctcagaggatcagtgacagtgagttctcagattacgactgtgaagac
ggcatcggggtgatatcagactacagacagaatgggcgtgacttccatagttccaccctc
tcagtgccagagcaagtgatgtcgaccaatcactgctcccgatccgatttggtcaggatg
aggtcacggtcaccgagccaaccgcctcctcacagtggcaaccctctgtacccgttgtat
cgagaagacgccgtgcgactattgcgaggttcaaagctgagcagagcgtattctgacgcc
ggccagtacagcagtctggacaggagatcactgaggaaaatgtctgttaccaactcgctc
gattctcatgacagatatatgaacggtccgtaccacgctccctggacaaaccccatgatg
aatgggaactgtgaggactacagtcaggacttcatcccagacttcccctacgaacccgac
acctacgacgaggaactgcacaggtacagccggggtatggaccggcggtattactacagt
cgctctcggtcagctgaccagcgtgcgatggcggaccaaccgctttacacacgctcacac
tccacagaccgatctgacttcgtccacctgaggtctggacgctccgcccccccctcacct
gcctgcaccagagccaatcctcaaagtggatcgacccagacgagtccgtcgggaacacca
gtctgtggccgccgagttcgccagctgcccattgtcccacccaaaggagctctggacaga
attttggccacgtctaccacaggagcaccacctgcagcccctcccactgcccacatacaa
acccctcctattggcattcaaccactacctcctcttatacgaatccaagccccgcctcct
cctggaactgtacagcctcacccacccccttcacctgcacctatacctgtaccagcacca
gcacatgaacctgtacatgcaaatgcaccagcccctgcacctgcacctgcacctgcacct
gcacctgcacctgcacctgcacctgcacctgcacctgcacctgcacctgcaccagcccat
gcacctgcacctgcacctgcacctgcaccagcacctgcaccagcaccagcacctgcacat
gcacatgcacatgcacctgcacatgcacctgcacctgcaccatctgtgggagccccatcc
ccggctcctacaattttacctacttctacaccagcacctccagcttccccagcccaacca
acacacacaacagccacccaagccccaccccctgtgcttgcacctatgccagccccactc
ccagctcctgtagtccaatcacagtcacctcttgaaccagccctgccccctgcacctact
ccaacacctgccccctccccagccccgcccccacagactccagagcctgaaatatgctca
gcaacatctggagggaccagaaaagaggtcacatgggaggaccagcaaaagaaagctgcc
aatggtgtgatgacggatccatccaagatgagggacagcttgtcctttaaatcgtcagac
agtgacgtcagcgacgtgtcggccatgtccaacgcctccgacacgcgatctgtacgcaga
attagccggtcggaggccctagaaggtcaatcagtggagttgggggcgggaacagaggga
aaacaggaagtagcggcagagggcggagccttactgcagaagagcgaatcgatggaagag
gccgaggaggaggaggaggaggaggaggccaagccttcaaagccggcaccggcggccgga
gctcctctcatgaagtcctcaagtgtcgggggggaaatctgttcgttgggcaggaatgac
gacgacgacgatgacaagaagcgacgctcgagtttcggagcgaggatgatggggatggtc
ggactgggaaagaagagtcagagcgcctcgcagctcaacccagaggaggaggagaagaag
aagaaggtggtgagacttcctgtccagaggagcatagaaaccggtttggctgttgagttc
aaatctcgtttcaccagacaaccgagtcgtgacccggacgccgacgaccccaaacctgga
gcgctgatatttccgggtgtgaagttggcaacggaccaacagttcactgggttcctggaa
ggattaggccccgcccagctggctggacggcagactctggccacgccccccatgggtgac
atccagattgggatggtgttcagaaaggagcgtctggacgtggaggtgattcgagcccgg
gggcttgtgggtaaacaaggcaacaagaacactccagctccgtatgtgaaggtgtacctg
atggataacgggaagtgtgttctgaagaggagaactcgtctggcaagaaaaacactggat
ccactttatcaacaacagctgcagtttgaggagaatccagagggaaaagtcctgcagatc
atcgtgtggggagactacggcaggatggaccataaatccttcatgggtgctgctcagatc
ctattggacgatctagacctgtccaacatggtgattggctggtttaaactgtttcctgcc
acctcattggtggaccctgccttggcacctctgaccaataaggagaccgagggcaagtcg
tag
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