Hippoglossus stenolepis (Pacific halibut): 118124457
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Entry
118124457 CDS
T08308
Name
(RefSeq) semaphorin-6D isoform X1
KO
K06842
semaphorin 6
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
118124457
NCBI-ProteinID:
XP_035038183
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Position
17:3042484..3058419
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AA seq
1155 aa
AA seq
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MSPFDWSSPWRPLPLMPLLILTSCFLSEAALSTNFPKDLEPINVVISDQSYHYPSFQGLP
RDNETLRLGLDFQRMLRLNHMLYIAARDHVFAVNLTMAADQLIPQLKLTWKSKDVSKCTV
RGKNSDECYNYVKVLVPRNDETLFTCGTNAFHPTCRNYKMTSLDQVGEDVVGQARCPFES
HQSNVGLFAGGDFYSATMTDFLASDAVIYRSLGDDRPVLRTVKYDSKWLREPHFLHAIDY
GNYVYFFLSEMAVEYTALGKVVFSRVARVCKNDNGGSPRVLERYWTSFLKARLNCSVPGD
SFFYFDVLQSLTNVLQINQRPAVVGVFTTQANSIPGSAVCAFYMDDIEKVFNGKFKEQRT
SDSSWTPIPDEQVPRPRPGVCAGDGSAAEYKSSVQFPDETLTFIKSYPLMDEAVPSLNDR
PCFTRTSSRSKLTQIVVDVLAGPFKDRIVMFLGSDDGRVLKVLASMHPNDSFGSKLLEDI
DVYNPSKCNVQDQEDRRVLGLELDKDHHALFVAFSSCVIRTPLSRCPQHGPCKKACLASR
DPYCIWLRTGSCANMAPGFKSGFEQDIEGDHSLLDDGCQGDVFVMTRNQESGVDSAFGVH
RLPDMDQRAAANVHYTLLIACVLVAFFLGAILSGFMMSCYCGRSAAHRARRLGKDPEMSL
PHALSLRSLAKLNGLLEGAPKEDKLDVSTPKMYSSFIPNGRSEPHLHSPGHQGLSLGDPE
LNVSQVRQSLSQTDGELSGLPTPDSTPQLPIKNMKALQQHQYEKNQYFNNTMAKNPKSGS
SLGFMAVVGNSFTPQVFPYSHHHGNSLSNGAAHGTGTSSTSLHLPEERDTLNEERAVTAR
GGGGGGGGEGGSEGRVYHHHHSQLSLAQTVVDVSALDELLKHIHEVSASGTGGIKVLTSI
SSSSLFPGPSSSGGQHHPLDQGHQTHTHHNNHSHHHSNHHCINSNCGGCRHHQQKIPETE
CALYNSTAALPRDALPKRLDAPSQNSASSFATSSSSSSSSSNNPTSSTSIPSASSSSSST
PLQPKGIPERFGGSSVSVARHHSQRHSLIKMGSGGVAVPRHHSFNQRGAQHANFLARMNT
NSSSNGPPARNHCESQRPSVASTCLTRQHSYTEGPHVQRAAIVRRTASLKPQVPPKPLFL
PNTAASATEVGKYNY
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atgtccccatttgattggtcgtcaccatggcgaccactgcccctgatgccgctgctcatc
ctcacttcctgtttcctgtccgaggcagctttgtccacgaacttccccaaagacctggag
ccaattaacgtggtcatctcggatcagtcgtatcattatccaagttttcagggtctacct
cgggacaacgagacactgcgtctgggcctcgactttcagaggatgttacgcctcaaccac
atgttgtacatcgctgccagggatcacgtgtttgcggtgaatctgacgatggcagcggac
cagttgattcctcagctgaagctgacgtggaaatctaaagacgtgagcaagtgtacggtg
cgagggaagaacagcgacgaatgttacaactacgttaaagttctggtgccaagaaacgac
gaaacacttttcacctgcggtaccaacgctttccaccccacctgtcgaaattacaagatg
acgtcgttggaccaggtgggggaggatgtggtgggacaggcccgctgtcccttcgagtct
catcagtccaacgtgggactgttcgcagggggcgacttctactcggccaccatgacggac
ttcctggcgagcgatgccgtcatctacaggagcctgggagacgaccgacccgtcctcagg
accgtcaagtacgactccaagtggctccgagagcctcacttcctgcacgccattgactac
ggaaactatgtctacttcttcctgagtgagatggcggtggagtacacggctctgggaaag
gtggtgttttctcgcgttgctcgtgtttgtaagaatgataatggaggatctccccgagtt
ctggagagatactggacgtctttcctcaaggctcgtctgaactgttcggttcctggagat
tcgttcttctacttcgacgttcttcagtctctcaccaacgttctgcagatcaaccagaga
cctgctgtggttggagtcttcaccactcaggccaacagtatccctggatctgcagtttgt
gcgttttacatggacgacatcgagaaagtcttcaatggaaaattcaaggagcagaggacc
agcgactcatcctggacaccgattcctgatgagcaggttcccagaccgagacctggtgtg
tgtgcaggcgacggttcggctgcagaatacaagtcgtctgttcagtttccagatgagaca
ctaactttcatcaagtcgtatcctctgatggacgaagctgttccctccctcaacgaccgg
ccttgcttcacccgcacgtccagcaggtccaagttgactcagatcgttgtggatgttttg
gccggtccctttaaagaccgcattgtcatgttcctcggctcagacgacggacgagtccta
aaggttttggcgagcatgcatcccaacgacagcttcggctccaagctgctggaagacatc
gacgtttacaacccgtccaagtgtaacgttcaggatcaggaggacaggagggttctggga
ctggagctggataaagaccatcatgctttgttcgtcgccttcagcagctgtgtgatcaga
acaccgctaagtcgctgtcctcaacacgggccgtgtaaaaaagcctgtctggcctctcgt
gacccatactgcatctggctgcggaccgggagttgtgccaacatggcgccgggtttcaag
tcggggtttgagcaggatatcgagggcgaccactcgctcctcgatgacggctgccagggt
gacgttttcgttatgacacgaaaccaagagtccggagttgactccgccttcggtgttcat
cgtcttccagatatggaccaacgcgccgcagctaacgtccactatacactcctgattgct
tgcgtgttggtggctttcttcttgggcgccatcttgtcaggctttatgatgtcatgctac
tgcggacgcagtgccgctcaccgggcacggcggctaggaaaagaccctgagatgtcactg
cctcacgctctgtcgctacgatctctcgccaagctcaacggtctgctggagggagcgccg
aaggaagacaaactggacgtgtcaactccaaagatgtacagctcctttatcccgaacgga
cgctccgaacctcatttgcacagccccggacaccagggcctgtcgctgggagaccctgag
ctcaacgtgtcgcaggtgagacagtctttgtcgcagacggatggtgagctgtccggtctg
cccacgccagactccaccccccagctgcccatcaagaacatgaaggcgctgcagcagcat
cagtacgagaagaaccaatacttcaacaacacaatggccaaaaaccccaagtctggatcc
agtctgggttttatggccgtcgtcggaaactctttcacaccgcaggtgtttccctactca
catcaccatggcaacagtctgagcaatggagcagcccacggaaccggcacttcttcaaca
tcgctgcacctccctgaggagagagacaccttgaatgaggagcgagcagtgacagcaaga
ggaggaggaggaggtgggggaggagagggaggatcagaaggcagagtctaccatcatcac
cattcgcagctgtctcttgcacagacggtggtggacgtgtcggcgcttgacgagctgctc
aagcacatccacgaggtcagtgcgtcaggcaccggtggcatcaaggtcctcacctccatc
tcctcgtcctcgctgtttcctgggccgtcgtcctctggggggcaacatcatccccttgat
cagggtcaccagacgcacacccaccacaacaaccacagccatcaccatagcaaccaccac
tgcatcaacagcaactgtggaggttgtcgtcaccaccagcagaagatcccagagactgaa
tgtgcgttgtacaacagcaccgccgcgctgccgagggacgcccttcccaaacgtttggac
gcaccctcccaaaattctgcctcctccttcgccacctcctcttcttcctcctcttcatcc
tctaacaatcctacttcctccacatccattccttctgcctcctcttcctcctcctccaca
ccgctccagccaaaggggatcccagagagatttggaggaagcagtgtctctgtggcacgc
caccactcccaacgccactcgctaatcaaaatgggcagtgggggagttgctgttccccgt
caccacagcttcaaccagcggggggcacagcatgctaactttctagccaggatgaacacc
aacagcagcagcaatggccccccggccagaaaccactgtgagagccagcggccgtcggtc
gccagcacctgcctgacgcggcagcacagttacaccgaggggccacacgtgcagcgggca
gcgatcgtccggagaacggcttcgctcaaacctcaagtcccgcctaaacccttgttcctg
ccaaacacagcggcatcagcaacagaggtgggaaaatacaactactga
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