Hippoglossus stenolepis (Pacific halibut): 118124536
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Entry
118124536 CDS
T08308
Symbol
clasp2
Name
(RefSeq) CLIP-associating protein 2 isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hsp03036
]
118124536 (clasp2)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hsp04812
]
118124536 (clasp2)
Chromosome and associated proteins [BR:
hsp03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
118124536 (clasp2)
Cytoskeleton proteins [BR:
hsp04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
118124536 (clasp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
HEAT_EF3_N
CEP104-like_TOG
HEAT
HEAT_EZ
TOR1L1_N
HEAT_DAAF5
ParcG
KH_DEAH11_1st
TAN
Motif
Other DBs
NCBI-GeneID:
118124536
NCBI-ProteinID:
XP_035038338
LinkDB
All DBs
Position
17:11038669..11091435
Genome browser
AA seq
1558 aa
AA seq
DB search
MEDHDNMEYFYQQVLQKDVTRRLQVGQDLIEYLSDPQRSPDVEQDKPRLDKTIDELAGWV
NSSNFKVTLMGIDIVGAFVERMGERFKGYLSTVLPSLVDRLGDGKDQVRDNSQALILRCV
EQTAAPMYVWERLLPGFKHKNFRSREGVCLCLSATLNTHGAQQLSLSKIVPHLCSLTGDQ
NPQVREASITTLVDVYRHVGEKVRADVGKRGLPAARLQTIFTRFDEALNSGNMALSPSHD
RNFDDDDDSVDGNHSSSAQAAFKVPKVPKKPAETSAARRPSATGGKLVSKESAGAVDEDD
FIKGFTDVPTVQIYSARDLEDNLNKIREICSDDKHDWDQRASAMKKIRSLLVAGAADYDC
FYQHLRLLDGAFKLSAKDLRSQVVREVCITVGHLSLVLGNKFDHGAEAIVPVLFNLIPNC
AKVMATSGVSAIRIIIRHTHVPRLIPLITSNCTCKSVAVRRRCYDFLVLLLQEWQTHSLE
RHTAVLVESIKKGIRDADSEARVEARKAYWGLRNRFPNEADALYNSLEPSYQRTLQSCLK
SSGSVASLPQSDRSSSSSQESLNRPLSSKWSAAPGRVPAGSKGGVSSASLQRSRSDVDVN
AAALAKHRNVGQARGSGRLTPGSYSSLDDASDKTDGTRSDNGRVRTKQPLSTASSVSSQV
DSRGRSRTKMVSQSQRSDESDCTPGSQSATPVGAGSRSGSPGRVLTSTALSTMSSGAHRV
LAGVGGEGKRRSRIPRSQGCSRDSSPTRLSVAPSSISSIYNGASRGARGSRIPRPSMSQG
CSREASRESSRDTSPIRSFTPLATRSYSRSTGALHTPDTFGAAGSSLGISQSSRLSSSVS
AMRVLNPGSDVEEALADALLLGDMRSKKKPARRRYENYSMYSDDDANSDASSACSERSYS
SRNGGAIPTYMRQTEDVAEVLNRCASANWSERKEGLLGLQALLKNQRTLSRVELKRLCEI
FTRMFADPHSKRDCGRVYGTAESGISSASFKRVFSMFLETLVDFILVHKEDLQDWLFVLL
TQLLKKMGADLLGSVQAKVQKALDVTRESFPNDLQFTILMRFTVDQTQTPNLKVKVAILK
YIETLTLQMEAPDFVNSSETRLAVSRIITWTTEPKSSDVRKAAQSVLISLFQLNTPEFTM
LLAALPKTFQDGATKLLQNHLKNSGNAAQATMGSPLTRHTPRSPASWSSPVTSPTNTSQN
TPSPSAFDYDTENMNSEDIYSSLKGVTEAIQNFSVRSQEDMNEPVQRREGDESGSGTDSR
GSDMMDGGRMALDNKTSLLNTPLLSSSPRGAREHFSDSPFKHSRKDTSLDDSELLTDDSS
LDQSELVAELLKELSNHNERIEERKAALCELLKLIRENTLQVWDEHFKTILLLLLETMGD
REHGIRTLALRVLREILCKQPWRFKNYAELTIMKALESHKDPHKEVVRAAEETAAMLALS
ISPDQCIKVLCPIIQSADYPINLAAIKMQTKVVERIPREGLMSLLPEIVPGLIQGYDNSE
SSVRKACVFCLVSVYAVIGEDLKPHLNQLSSSKLKLLNLYIKRAQSGSSGSEPPTDGL
NT seq
4677 nt
NT seq
+upstream
nt +downstream
nt
atggaggaccatgacaacatggagtacttttaccagcaggtactgcagaaagacgtcacc
cgcaggttgcaggtcggtcaggacctcatcgaatacctgagcgacccgcagcgctccccg
gacgtggagcaggacaaaccccggttggataagaccatagacgagctagcgggatgggtg
aactccagcaatttcaaggtgaccttgatggggatagacatcgttggcgcattcgtggag
cgcatgggagagcggttcaaaggatacctgtccacagtgttaccatctctagtggacagg
ctgggtgatgggaaggaccaggtcagggataacagccaagctcttatccttcgctgcgtg
gagcagaccgccgcgcccatgtacgtctgggaaaggcttcttcctggttttaaacataaa
aacttccgcagtcgagaaggagtctgcctctgtctcagtgctacgctcaacacgcatgga
gctcagcagctgagcctcagtaaaatagttcctcatctctgctctctgactggagaccag
aacccacaggtgcgtgaggcctccataacaacattggtggatgtctatcgtcacgttgga
gagaaggtccgagcagacgtaggaaagagaggcctgcctgctgcacggttacagacgata
ttcactcgttttgatgaagccttgaattcaggcaacatggctctcagcccgagtcacgat
cgtaattttgacgatgacgatgacagtgtggatgggaatcattcttcctccgcccaggct
gcattcaaggtccccaaagttccaaagaagcctgcagagacctcggctgcacgcaggccc
agtgctactggtggcaagctagtgtctaaagaaagtgccggagcagttgatgaagatgat
tttattaaaggcttcacagacgtccctacagtccagatctactcagcaagggatcttgag
gacaacctcaataagatccgtgagatttgctccgatgacaaacacgactgggaccagaga
gccagtgctatgaaaaagatccgctcactgcttgtggcgggcgcagccgactacgactgt
ttttaccagcacctacggctactggatggagctttcaaactgtcagcgaaagacctgcgc
tcgcaagtggttcgagaggtctgcatcaccgtgggccacctttcattagtgttggggaat
aaatttgaccacggagcggaagccatcgttcccgtccttttcaacctcatccccaattgc
gccaaagtcatggccacctccggtgtgtcggctatccgcatcatcatacggcacacacat
gtcccgaggctcatccctctgataaccagtaactgcacatgcaagtctgtggccgttaga
aggcgctgttacgatttcttggtccttctgctccaggaatggcaaacccactctctagag
aggcacacagcggttctggttgaaagcatcaagaagggaattagagatgctgactcagag
gccagagtggaggcccgcaaggcctactggggtttgaggaaccgctttccgaatgaggct
gacgctctctacaactccttagagccatcttaccagcggacccttcagtcctgcctgaag
agttccggcagtgtggcctctcttccccagagtgaccggtcctcatcttcctctcaagag
agcctcaatcggcctctttcttcaaaatggtctgcagctccagggcgagtccctgcgggt
tcaaagggtggggtgtcgtcggcctccctgcagcgttcccgtagtgacgtggatgtaaac
gcggcagcattggctaagcaccggaacgtcggacaggccaggggctcgggtcgactgacc
cctggctcctactcctcactggatgatgcctctgataaaacggatgggaccaggtcagac
aatggccgtgtacgtaccaagcagccgctgtccactgcgagcagcgtgtccagccaagtg
gactcaagaggacgcagccgcaccaagatggtctcccagtcgcaacgttccgacgaatcc
gattgcacaccaggatctcagtctgctacccctgttggtgctggcagtcggagtggttca
cccggtcgcgtgctgacgagtacggccctgagcaccatgagctcaggggcccacagggtg
ctggctggggtcggcggtgaaggaaaaagacgcagccgcatcccccgcagccagggctgc
tccagagactcctcccccactcgtctgtctgttgctccttccagcattagttccatctac
aacggtgcgagtagaggagctcggggcagtcgtatccctcggcccagtatgagtcagggc
tgcagcagagaggccagcagggagagcagccgggacaccagccccatacgctccttcact
ccacttgcaacacggagctactctcgctccaccggagctctccacacacctgacactttt
ggcgctgcaggttcatctcttggcatcagtcagtccagtcgtctctcatcttcagtcagt
gccatgagggtcctcaacccaggctcagacgtagaagaggctctcgcagatgctttactg
ttgggagacatgcggtccaagaagaagccagcacggcggcggtacgagaactacagcatg
tactccgacgacgacgccaacagtgatgcatccagcgcctgttcagaaaggtcctatagc
tccagaaacggaggagccatcccgacctacatgagacagacagaagacgtggctgaggtg
ctgaatcgctgtgccagtgccaactggtctgagaggaaggaggggctgttaggtctccag
gctctactcaagaaccaacgcaccctcagtcgggtggagttaaagagactgtgtgaaatc
ttcactcggatgtttgcagaccctcacagtaagcgagactgcggcagagtgtacggcacg
gcagaatccggtataagctcagcctccttcaagagagtgttcagtatgttcctggagacc
ctggtggacttcatcctggtccataaggaggacctgcaggactggttgttcgtcctgctc
acacagctgctgaagaagatgggagccgatctgctgggctccgtacaggccaaagttcag
aaagcgctggatgtcacaagggagtctttccccaacgacctccagtttactattctgatg
agatttactgtcgaccagacacagacgcccaacctcaaggtgaaggtggccattctgaag
tacatcgagacgctgacgttacagatggaagctcccgactttgtgaactccagtgagact
cggctggccgtctcccgcatcatcacctggacgactgaacccaagagctctgacgtcaga
aaggcagcccagtcggtgctaatctccctgttccagctcaacacaccagagttcaccatg
ctgctggcagctctgcccaaaacttttcaggacggagccaccaagctgcttcaaaaccat
ttgaagaactcgggcaatgctgcacaggcaacaatgggcagccctttaacacgccacacc
ccccgatctccagccagctggtccagtccagtcacttccccaaccaacacctcccagaac
accccatcaccaagtgcttttgactacgacacagaaaacatgaactcggaggacatctac
agctcgctgaaaggtgtcactgaagccatccagaacttcagcgtccgcagccaggaagac
atgaatgaaccagtccaacggcgggaaggagacgagagtggcagcgggacagacagcaga
ggatcagacatgatggacggcggccgcatggctctggacaacaagacctccctcctcaac
acccccctgctctcctccagccccagaggagcccgcgagcacttctccgattccccgttt
aaacacagccgcaaagacaccagcctggacgactccgagcttctcactgacgatagcagt
ctggaccagtcagagctggtggccgagctgctgaaggagttgtcgaatcacaacgagcgc
atagaggagaggaaggcggcgctgtgtgaactgctgaagctgattcgcgaaaacaccctg
caggtgtgggatgagcacttcaagaccatcctgctgctcctgctcgagacgatgggtgac
agagagcatgggatccgaacactggctctgcgggtgctgagggagattctctgcaagcag
ccctggaggttcaagaactacgcagagctcaccatcatgaaggccctggagtctcacaaa
gaccctcacaaggaggtggttcgagcagcagaggagacggcagccatgttggcgttgtcc
attagtccagaccagtgtatcaaggtgttgtgtcccatcatccagtcggccgactacccc
atcaacctggctgccatcaagatgcagaccaaagtggtggagaggattccccgagagggc
ctgatgagcctgctgccagaaatcgtgccaggactcatacagggttatgacaactctgag
agcagtgtgaggaaagcctgtgtgttctgcttggtgtccgtttacgcggtgatcggagag
gacctcaaaccgcacctcaaccaactctccagcagcaagctgaagctgctgaatctgtac
attaagcgtgcccagtccggctccagcggtagcgagccccccactgatggcctatag
DBGET
integrated database retrieval system
