Hippoglossus stenolepis (Pacific halibut): 118124554
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Entry
118124554 CDS
T08308
Symbol
top2b
Name
(RefSeq) DNA topoisomerase 2-beta isoform X1
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hsp03032
]
118124554 (top2b)
03036 Chromosome and associated proteins [BR:
hsp03036
]
118124554 (top2b)
Enzymes [BR:
hsp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
118124554 (top2b)
DNA replication proteins [BR:
hsp03032
]
Eukaryotic type
DNA Topoisomerases
118124554 (top2b)
Chromosome and associated proteins [BR:
hsp03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
118124554 (top2b)
Centrosome formation proteins
Centriole proteins
118124554 (top2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
DTHCT
HATPase_c
Toprim
Microp_apicomplexa_20
Motif
Other DBs
NCBI-GeneID:
118124554
NCBI-ProteinID:
XP_035038410
LinkDB
All DBs
Position
17:complement(20439552..20467729)
Genome browser
AA seq
1626 aa
AA seq
DB search
MSNGAAGSGALAWLEAANGRGDASKMEGTKKDKAASKLSVERVYQKKTQLEHILLRPDTY
IGSVEPTTQQMWVFDEEIGMNQREITYVPGLYKIFDEILVNASDNKQRDKNMTAIKITVD
PESNTISIWNNGKGIPVVEHKDEKMYVPALIFGHLLTSSNYDDNEKKVTGGRNGYGAKLC
NIFSTKFTVETACKEYRHSFKQTWQNNMTKTSDPKVKFFDGEDFTSVTFQPDLSKFKMEK
LDKDIVALLTRRAYDIAGSCKGVKVTLNGKKLPITGFRSYVDLYVKDKVDETGVALKVVN
ETVNDRWEVCLTMSEKGFQQISFVNSIATTKGGRHIDYVVDQIVAKLIEVVKKKNKAGVT
VKPFQVKNHVWVFVNALIENPSFDSQTKENMTLQTKSFGSKCPLSDKFVRAATNCGIVES
ILNWVKFKAQTQLNKKCSSVKYSKIKGIPKLDDANDAGGKHSGECTLILTEGDSAKSLAV
SGLGVIGRDRYGVFPLRGKILNVREATHKQIMENAEINNIIKIVGLQYKKSYEDPESLRT
LRYGRIMIMTDQDQDGSHIKGLLINFFHHNWPSLLKHTFLEEFITPIVKVTKNKQEQSFY
SIPEFDEWKKQTENFKTWHTKYYKGLGTSTSKEAKEYFSEMEKNRITFRYTGAEDDAAIT
LAFSKKKTDDRKEWLTNFMEDRRQRRMHGLPEQYLYGTQARHLSYNDFINKELILFSNSD
NERSIPSLVDGLKPGQRKVLYTCMKRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVN
LAQNFVGSNNVNILQPLGQFGTRINGGKDAASPRYIFTMLSPLAKLLYPGVDSNLLKFLY
DDNQKVEPEWYIPIIPLVLVNGAEGIGTGWACKIPNYDVREIVNNINRMLNHQDPLPMLP
SYKNFKGVIHELGQNQYLVSGEVSVIDKNTIEIIELPVRTWTQAYKESVLEPMLQGTDKT
PALINDYKEYHTDTTVKFVVRMSEEKLAQAEAAGLHKVFKLQSSLTCNSMVLFDHMGCMK
RYDSVQDILKEFFELRLQYYKLRKDWLLGNLGAEASKLSNQARFVLEKIEGKVSIENKSK
RELIRMLVQKGYESDPVAAWSKSQEKAQEEDYRDGNDSDGSVDSGSSSGPNFNYILNMPL
WCLTKEKVEELLKQRDQKRGELNDIQKKSSDDLWKEDLAVFIEELDKVEAQEREDQSLGK
AIKLVKGKVGKPRAKKLNLEETMPSPYGRRVAPPTQALKSDAAKKLTKKKKGDADVTMKL
EFDDEGLAAEGATGATGATGATGEDSVPKAKAPRVKKEKKEPAAPRARKPATPKGTPAKK
VKKRNPWSEDESNSESDLENSEPLIPRETKSFRASASKPKYTFDFSEEEEAEEEENGDDN
VASSPVRSFKDTFPSSDTKERFDDNNEEEDDEDEDSYPPPEKTTTSAPVAEKKETTSIFS
SKTFSEKSNDSDRSKSDSEDDDDNNGPVFSTYSSSSAFDKLLPSKKAAKKPSDAAPKPKK
SPAPKAKKPDKSIWDSDSDTGSKKPAPAPASALKGKGRGRKRKGSASEDEYNPMKKMNKP
ASRSSQKPQKPPSDDEEDEDDNDNSLSAMSAMSAPSRDRPGRAKKEVKYFHESDIGEDDE
DDNMFD
NT seq
4881 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacggcgcagcaggaagcggggctctggcttggctggaggcagcgaacggcaga
ggggatgccagcaagatggaagggaccaagaaagacaaggcggcctccaagttgtctgtg
gagcgagtgtatcagaagaagacccagctggagcacattcttctccgtccagacacgtat
atcggctccgtggagcccaccacacagcaaatgtgggtttttgatgaagaaatcggcatg
aaccagagggaaatcacctacgttcccgggctgtacaaaatctttgatgaaattcttgtc
aatgcatcagacaacaaacaaagggacaagaacatgacagccattaagatcaccgtcgac
cctgagtccaacaccatctccatatggaacaatggtaaaggaattcccgtggtggagcat
aaggatgagaagatgtatgtcccagctctcatttttggccacctcctcacctccagcaac
tatgatgataacgagaaaaaggtcacaggtgggagaaatgggtacggtgctaaactctgc
aacatcttcagtaccaagttcacggtggaaacggcctgcaaggaatacagacacagcttc
aaacagacgtggcagaacaacatgaccaagacttctgaccccaaggtcaaattctttgat
ggggaggatttcaccagcgtgacatttcagccagacctgtccaagttcaagatggagaag
ctggacaaggatattgtagctcttcttacccgcagagcttatgatatagcaggctcctgc
aaaggagttaaagttacactgaatggcaaaaagttacccatcactgggttccgtagctat
gtggatctgtatgtgaaggacaaagtggatgagacgggcgtggccctgaaggtggtcaat
gaaactgtgaatgatcgctgggaggtttgcctcaccatgagtgaaaaaggatttcagcaa
atcagctttgttaacagcattgccacgaccaagggtggcagacacatcgactatgtggtg
gaccagattgtggccaaacttattgaagtggtgaagaagaagaataaggcaggagtgact
gtgaaacccttccaggtgaagaaccatgtctgggtgtttgtgaacgctctgattgagaat
ccctcctttgactcccagaccaaggagaacatgacactccagaccaaaagttttgggtcc
aagtgtcctctgtcagataagttcgtccgcgctgcaaccaactgtgggattgtggagagt
atactcaactgggtgaagttcaaagctcagacacagctaaataaaaagtgctcatccgtg
aaatacagcaagatcaaaggcatccccaagcttgacgacgccaacgatgctggtggcaaa
cactccggtgagtgcacactcatcctcactgagggagactcagccaagtccctggcggtc
tctggactgggagtcattggacgtgaccgctatggagtgtttccactaagaggaaagatc
ctaaacgtgcgagaggcaacacacaagcagatcatggaaaatgctgagattaataacatc
atcaaaatcgttggccttcaatacaagaagagctatgaagacccagagtcactgaggacc
ctacgctacggcaggatcatgatcatgactgatcaggatcaagatggctcccatatcaaa
ggtctgctcatcaacttcttccatcacaactggccctcgctgctgaaacacaccttcctg
gaggagtttatcacacccatcgtcaaagtgaccaagaacaagcaggaacagtccttctac
agtatcccagagtttgatgagtggaagaaacagacagagaactttaaaacctggcataca
aagtactacaaaggtttgggaacaagtacaagtaaagaggcaaaagagtacttttctgaa
atggagaaaaaccgcatcacattcagatacactggcgcagaggacgatgctgccatcact
ctggctttcagtaagaagaagacagatgacaggaaggagtggctgactaacttcatggaa
gacagacgacagaggaggatgcacggcctgccagagcaatacctatatggaactcaggcc
agacacctctcctacaatgacttcatcaacaaagagttgattttgttctccaactctgac
aatgagagatcaatcccgtctttggttgatggcttgaagccaggtcagagaaaagtgctg
tacacctgcatgaagaggaacgacaagagggaagtgaaggtagcacagctggctggttca
gtggcagagatgtcagcctaccatcatggagagcaagctctcatgatgaccattgtgaac
ttggcccagaactttgtgggcagtaacaacgtgaacatcctgcagcctctcggccagttt
ggtactcgcatcaatggaggcaaagatgctgccagccctcgttacatttttaccatgctc
agtcctcttgccaagctgttgtaccctggagtggactccaacctgctcaagttcctgtac
gatgacaaccagaaggtggagcccgagtggtacattcccattattccattggtgctggtg
aatggtgctgagggcatcgggacaggctgggcgtgtaagatcccaaactatgatgtccga
gagatcgtcaacaacatcaaccgcatgctcaaccaccaggaccctctgccaatgcttccc
agctacaaaaacttcaaaggggtgatccatgagctgggtcagaaccagtacctggttagt
ggagaggtgtcggtcatagataaaaacaccattgagatcatagagcttcctgtcaggaca
tggacacaggcctataaggagtctgtgctggagcccatgctgcagggcactgacaaaaca
ccagctctcatcaacgattataaggagtaccacacagacaccacagtcaagtttgtggtc
cgcatgtctgaggagaaactggcccaggctgaggcggctggtcttcacaaagtcttcaag
ctgcagtccagcctcacctgcaactccatggttctgttcgaccacatgggttgtatgaag
aggtacgattcagtccaagacatcctcaaagagttctttgagctccgcctgcagtactac
aaactgaggaaggactggttactgggcaacctgggagccgaggcctccaagttgtccaac
caggctcgctttgtcctggagaaaattgaagggaaagtttcaatcgaaaacaaatcgaag
cgtgaactgattcgcatgctggtccagaaaggatatgaatctgatccagtagcagcctgg
agcaaatctcaggagaaggctcaggaagaagattaccgtgatggaaatgatagcgacggc
tcagtggactccggctcctcgtcggggccaaacttcaactacatccttaacatgcctctg
tggtgcctgactaaagagaaggtggaggagttgctcaaacagagggaccagaagagagga
gaactgaacgatatccagaagaaatcctctgatgatttgtggaaggaggacttggcagtc
ttcatagaggaactggataaagtggaggctcaggagcgagaggaccagagtttaggaaag
gccatcaaactggtgaagggtaaagttggcaaacctagagcgaagaagctgaacctggag
gagaccatgccgtcaccgtatggccgcagagtggcgcctccgacccaagcactcaaatct
gacgctgccaagaaactgaccaagaagaagaagggtgacgcagatgtgacgatgaagttg
gagtttgatgatgagggtttggctgcagagggagcaacgggagcaacgggagcaacagga
gcaacgggagaagattctgttcccaaagcgaaggctccacgtgtcaagaaagagaaaaaa
gagcctgccgctcctagggcaagaaaaccggcaacacccaaaggtacccccgccaagaag
gtgaagaagagaaacccctggtctgaggatgagtccaactctgagagtgacctggagaac
agcgagccgctcatccccagagagaccaagtccttcagggcatcagcctccaagccaaaa
tacacgtttgacttctcggaggaggaggaggcagaggaagaggagaacggagacgacaat
gtggcttcttctccggtgaggtcatttaaagataccttcccttcgtctgacaccaaggaa
cgcttcgacgacaataatgaggaagaggacgatgaggatgaagactcctaccctcctccc
gaaaaaacgaccacgtctgcacctgtagctgaaaagaaagagacaaccagcatcttctcc
tccaagaccttctctgaaaaaagcaatgacagtgatcggtccaagtcagacagtgaagac
gacgacgacaacaacggccccgtgttctcaacctactccagcagctctgcctttgacaaa
ctactgccgtcaaagaaagcagctaagaaaccttccgatgcagctcccaaacctaagaag
tcaccagcaccaaaagcaaagaagccagataaatccatatgggactctgactcggacacc
gggtccaaaaagccagcaccagcaccagcttcagctctcaaaggtaaaggtcgagggagg
aagaggaagggctctgcctctgaagacgagtacaatccaatgaagaaaatgaacaaacct
gccagcagatcttcgcagaaaccccagaaacctccatctgatgatgaggaggacgaggac
gacaacgacaacagcctgagtgcgatgagtgcgatgagtgcgccatcccgtgatcggccg
ggtcgggccaagaaagaagtgaagtacttccacgagtcggacatcggggaagatgacgag
gacgacaacatgttcgattaa
DBGET
integrated database retrieval system
