Hippoglossus stenolepis (Pacific halibut): 118124567
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Entry
118124567 CDS
T08308
Symbol
ctdp1
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase
KO
K15732
RNA polymerase II subunit A C-terminal domain phosphatase [EC:
3.1.3.16
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hsp01009
]
118124567 (ctdp1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsp03021
]
118124567 (ctdp1)
Enzymes [BR:
hsp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
118124567 (ctdp1)
Protein phosphatases and associated proteins [BR:
hsp01009
]
HAD phosphatases
Fcp/Scp phosphatases
118124567 (ctdp1)
Transcription machinery [BR:
hsp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
118124567 (ctdp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCP1_C
BSH_Fcp1
NIF
PTCB-BRCT
BRCT
RTT107_BRCT_5
Biotin_lipoyl
P22_portal
Motif
Other DBs
NCBI-GeneID:
118124567
NCBI-ProteinID:
XP_035038434
LinkDB
All DBs
Position
17:complement(17704766..17769963)
Genome browser
AA seq
1016 aa
AA seq
DB search
MEDPPAGSGGGGGDSAVAEGPVVQVADICWSSAALPLRLLEWKVKPGTLINVDSVLALCA
PIAPERATEAARLPEKKVKSDRAGVVRELCCQLGQVIPPGGVIVRIEVCSHPIVMKGLCA
ECGQDLTQLQGTNGNQQTPISTATVSMVHSVPELMVSAEQAEQLGREDQQRLHRSKKLVL
MVDLDQTLIHTTEQHCQQLSNKGIYHFQLGRGEPMLHTRLRPHCIEFLAKIAKLYELHVF
TFGSRLYAHTIAGFLDPKKNFFSHRILSRDECIDPFSKTGNLRNLFPCGDSMVSIIDDRE
DVWKFAPNLITVKKYIYFQGTGDINAPPGSRESQMARKGGPSSRPAESTESAGTLGTEEH
NNGIRKRSKDQNPSGKDEPTASQSSQGVPTNARTHPTGGVEDVSGQSKESVTESVTESVT
EALPEALPEALPEAGSKEAQETDRTNVKEDDSKGTQEAQEGANSSAPSHDSNNLDFDLSS
DSDNDSITDKPPSSDGDSEVKSCQTKKKPEPEGVTQEPSDGEEAKVDSKGQGEIDNSSDV
AEPSGVLLPDPELGNGCSDRTEPETESQNSEQSGVTMGEELLDQSMEDEEEEEADIDQDD
HLIYLEEVLERVHAEYYGRYEAFLRKDAPETPDIRKIVPELKGKTLEGTMIVFSGLYPTN
YPMERTREFYHAKALGAKIGKNLALNSEDPNRTTHLIAARAGTEKVRRAQGCNHLYVVNP
DWLWSCLERWERVEEQLYPLKEDYSKMPRSNSPAAFPDNQGPLQRPLFQPAPIHHRPPPP
ELEVRIYDPVTGKLIRRGPQVSQPQPYLQAPGSMLLSDHQQSCLRGSSKDQQDDAAGPSH
DDEQPGPSRRKRQPSMSETMPLYTLCKEDLESMDKEVDDMLGEESDNESDGRGKEKPGNE
EVEDEEEEEEEEEEEQQQQQQQQQQQQPGAGQIAGDGHDAQTLTLEDRLQTPFSEAGLLG
GVPRGQKRKHDEGKDVEESKQFADESSKDSNEEEEGSSSEADEMAAALEAELNDFM
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atggaggaccctcctgcaggttctggcggcggcggcggcgacagtgcggtggcggagggc
cccgtggtgcaggtggcggacatctgctggtcgagcgcggctctcccgctgcggctgctg
gagtggaaggtcaaacccgggactctcatcaacgtggactccgtgctggctctgtgcgcc
cccatagccccggagagggcgacggaggctgccaggctgccggagaagaaggtgaaatcg
gaccgcgccggagtagtgagggagctgtgctgtcaacttgggcaagtcatcccccccggg
ggtgtcattgtcagaatagaagtatgcagccacccgatagtgatgaagggtttatgtgcc
gaatgtggccaggacctgacacagctgcagggcacgaatgggaaccaacaaactcccatc
tccacagcaacagtctccatggtgcacagtgtccccgagctgatggtcagtgcagagcaa
gcagagcagctgggcagagaagaccagcagaggctccaccggagcaaaaagctggttctg
atggtggatctggaccagaccctgatccacaccactgaacagcactgccagcaattgtcc
aataagggcatttaccacttccagcttgggcgaggagagcccatgctccacacacgacta
cgcccgcactgcatcgagttcctggcgaaaattgccaaactctatgagttgcacgtcttc
acattcgggagccgcctttatgcacacaccattgcaggctttctggaccctaaaaagaat
tttttctctcatcggatcctttctagagacgaatgcatcgatcccttctccaagacgggg
aatcttaggaaccttttcccatgtggggattcgatggtgagcataatcgatgaccgagag
gacgtgtggaagttcgcaccaaacctcatcactgtgaagaaatacatctacttccaaggc
acaggggatatcaatgctccccccggatcacgggaatctcagatggccaggaaaggaggt
ccctcaagtcggccagcggagagcacagaatcagcagggacgcttggaacagaagagcat
aataatggcatcaggaaaaggtcaaaggaccagaatccgtctggaaaggatgagcccaca
gcatctcagtcttctcagggagtaccaacaaatgcacggactcaccccacagggggtgtg
gaggatgtgtcaggacaaagtaaagagtcagtgactgagtcagtgactgagtcagtgact
gaggcgctgcctgaggcgctgcctgaggcactgcctgaggcagggtcgaaagaagctcag
gaaacagatagaacaaatgtaaaggaagatgacagcaaggggacgcaagaggcacaggaa
ggtgcaaactcctcagcacccagccacgactccaacaacttggactttgacctgtcaagt
gacagtgacaatgactctattacagacaaacctccctcatctgatggggatagtgaagtg
aagtcttgccaaacaaaaaagaaaccagaaccggaaggtgttacgcaagagcccagtgat
ggggaagaggccaaggtagacagtaaaggccagggagaaatagacaacagttcagatgta
gcagaaccttcaggagttcttcttccagacccagagctcggaaatggctgctcagacagg
acagagccagaaacagagtcccagaatagtgaacaatctggggtcaccatgggggaggaa
ctgctagaccagagtatggaagacgaggaggaagaagaagcagatattgaccaggatgat
cacctgatctacctggaggaagtgctagaaagggttcatgctgagtactatggccgctac
gaggcattcctgaggaaggacgccccggaaaccccggacatccgcaagattgtcccagag
ctgaaaggaaaaacactggagggaacaatgatagtgttcagtggtctgtacccgaccaac
taccccatggagaggactcgtgagttctaccatgccaaggcactgggggccaaaattggc
aagaatctggctctcaactccgaagatcccaatcggacaacacatctcattgcagcaaga
gctggcacagagaaggttcgtcgggcacagggctgcaaccacctctatgttgtcaatccc
gactggctgtggagctgtctggagcgctgggagagggtggaggagcagctgtacccacta
aaggaagactactccaagatgccaaggagcaacagtccagcagcctttcctgacaatcag
ggccccctgcagaggcctcttttccagccagctcccatccaccacagacctccacctcca
gagctcgaggttcggatctacgatcccgtcacggggaagctgatccgcaggggccctcag
gtgtcacagccgcaaccctacctccaggctccagggtcaatgttgctctctgatcaccaa
cagtcttgtctcaggggatcttcaaaggatcagcaggatgacgcagcggggcccagccac
gacgacgagcagcctgggccgtctcgtagaaaacgacagccaagcatgtcagaaactatg
cctctatacacactttgcaaggaggatctagagagcatggataaagaggtggacgacatg
ttaggtgaggagagcgacaacgagagtgatggccgagggaaggagaagccaggtaatgag
gaggtggaggatgaagaagaagaagaagaagaggaagaggaggagcagcagcaacagcaa
cagcagcagcagcagcagcagccaggagctggacagatagcaggagacggccatgatgcc
cagacgctgaccctggaagacaggcttcagacgccgttcagtgaggccggtctgctgggt
ggtgtgccaaggggccagaaacggaagcacgatgaaggcaaggacgtggaggagagtaag
caatttgctgacgagtcctccaaagactccaacgaagaagaggaaggcagcagctctgag
gcagatgagatggccgctgcactggaggcggagctcaatgactttatgtga
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