Hippoglossus stenolepis (Pacific halibut): 118124616
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Entry
118124616 CDS
T08308
Name
(RefSeq) elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118124616
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsp03019
]
118124616
03016 Transfer RNA biogenesis [BR:
hsp03016
]
118124616
03012 Translation factors [BR:
hsp03012
]
118124616
04131 Membrane trafficking [BR:
hsp04131
]
118124616
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hsp04147
]
118124616
Messenger RNA biogenesis [BR:
hsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
118124616
Transfer RNA biogenesis [BR:
hsp03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
118124616
Translation factors [BR:
hsp03012
]
Eukaryotic type
Elongation factors
118124616
Membrane trafficking [BR:
hsp04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
118124616
Exosome [BR:
hsp04147
]
Exosomal proteins
Proteins found in most exosomes
118124616
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Semialdhyde_dhC
Gtr1_RagA
Motif
Other DBs
NCBI-GeneID:
118124616
NCBI-ProteinID:
XP_035038530
LinkDB
All DBs
Position
17:complement(3244529..3248333)
Genome browser
AA seq
461 aa
AA seq
DB search
MGKAKTHINIVVIGHVDSGKSTSTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDIALWKFETTRYCVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAFTLGVKQLIVGINKMDSTEPPYSQPRFEEITKEVSTYIKK
IGYNPAAVAFVPISGWHGDNMIETSEKMSWYKGWKVERKEGNGSGTTLLEALDSILPPSR
PTDKALRLPLQDVYKIGGIGTVPVGRVETGLLKPGMLVTFAPPNLTTEVKSVEMHHESMP
EAVPGDNVGFNIKNVSVKEIRRGYVAGDSKNDPPKAAASFNAQVIILNHPGQINEGYAPV
LDCHTAHIACKFKELIEKIDRRSGKKLEDSPKFVKSGDAAIVKLVPQKPMVVESFSNYAP
LGRFAVRDMRQTVAVGVIKSVDNKDISGKTTKAAEKAQKKK
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggcaaagacccacatcaacatcgtggtcatcggccatgtcgactccggcaag
tccacctccaccggacacttgatctacaagtgcggaggaatcgacaagaggaccatcgag
aagttcgagaaggaagccgccgagatgggcaagggctccttcaagtacgcctgggtgctg
gacaaactgaaggccgagcgtgagcgtggtatcaccatcgacatcgctctgtggaagttt
gagaccacaaggtactgtgtgaccatcattgatgctcctggacacagggacttcatcaag
aacatgatcactggaacctctcaggctgactgtgccgtgctgatcgttgctgctggtgtt
ggtgagttcgaggctggtatctccaagaacggccagactcgtgagcacgccctgctggcc
ttcaccctcggtgtgaagcagctcatcgttggtatcaacaagatggactccaccgagccc
ccttacagccagccccgtttcgaggagatcaccaaggaagtgagcacctacatcaagaag
atcggctacaaccccgccgctgttgctttcgtccccatctctgggtggcacggagacaac
atgatcgaaactagtgaaaagatgagctggtacaaaggatggaaggttgagcgcaaggag
ggtaatggcagtggaaccacactgctggaagctctggactccatcctgccaccttcccgc
cccacagacaaggctctccgtctgcccctgcaggacgtctacaaaatcggaggtattgga
actgtacccgtcggtcgtgttgagactggtctcctgaagcctggtatgctcgtcaccttc
gctccccccaacctgaccactgaggtcaagtctgtggagatgcaccacgagtctatgccc
gaggctgtccccggtgacaacgttggcttcaacatcaagaacgtgtctgtcaaggaaatc
cgtcgtggatacgttgctggagacagcaagaacgacccacccaaggctgctgccagcttc
aacgcccaggtcatcatcctgaaccaccctggccagatcaacgagggttacgcccccgtg
ctggattgccacacggctcacattgcttgcaagttcaaggagctcatcgagaagattgac
cgtcgttccggcaagaagcttgaggacagccccaagtttgtcaagtctggagatgctgcc
attgtcaaactcgttcctcagaagcccatggttgtggagtccttctccaactatgctccc
ctcggtcgtttcgctgtgcgtgacatgaggcagacagtggctgtcggtgtcatcaagtct
gttgacaacaaggatatttctggaaagacgaccaaggctgcagagaaagcccagaagaag
aaatga
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