Hippoglossus stenolepis (Pacific halibut): 118124617
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Entry
118124617 CDS
T08308
Name
(RefSeq) elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118124617
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsp03019
]
118124617
03016 Transfer RNA biogenesis [BR:
hsp03016
]
118124617
03012 Translation factors [BR:
hsp03012
]
118124617
04131 Membrane trafficking [BR:
hsp04131
]
118124617
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hsp04147
]
118124617
Messenger RNA biogenesis [BR:
hsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
118124617
Transfer RNA biogenesis [BR:
hsp03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
118124617
Translation factors [BR:
hsp03012
]
Eukaryotic type
Elongation factors
118124617
Membrane trafficking [BR:
hsp04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
118124617
Exosome [BR:
hsp04147
]
Exosomal proteins
Proteins found in most exosomes
118124617
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Gtr1_RagA
Beta-prop_WDR75_2nd
Motif
Other DBs
NCBI-GeneID:
118124617
NCBI-ProteinID:
XP_035038531
LinkDB
All DBs
Position
17:complement(3230090..3237862)
Genome browser
AA seq
461 aa
AA seq
DB search
MGKEKIHINIVVIGHVDSGKSTSTGHLIYKCGGIDKRTIDKFEKEAAEMGKSSFKYAWVL
DKLKAERERGITIDIALWKFETTKYSVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAFTLGVKQLIVGINKMDNTEPPYSQSRFEEIKKEVSTYIKK
IGYNPGAVAFVPISGWHGDNMIETTEKMSWYKGWKVERKEGNGSGTTLLEALDSILPPSR
PTEKALRLPLQDVYKIGGIGTVPVGRVETGILKPGMLVTFAPSNLTTEVKTVEMHHEALP
EALPGDNVGFNIKNVSVKEIRRGYVAGDSKNDPPLEAENFKAQVIVLNHPGQISNGYTPV
LDCHTAHIACKFKELVEKIDRRSGKKLEADPKFIKSGDSAIVLMKPSKPLVVEAFSEYAP
LGRFAVRDMRQTVAVGVVKSVEKKHLTSAKVTKSAQKVQKK
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggaaaagatccacatcaacatcgtggtcatcggccatgtcgactctggaaag
tccacctccaccggacacttgatctacaagtgcggaggaatcgacaagaggaccatcgat
aagttcgagaaggaagctgccgagatgggcaaaagctccttcaagtacgcctgggtgctg
gataagctgaaggccgagcgtgagcgtggtatcaccatcgacatcgctctgtggaagttt
gagaccacaaagtacagcgtgaccatcattgatgctcctggacacagggacttcatcaag
aacatgatcactggaacctctcaggctgactgtgccgtgctgatcgttgctgctggtgtt
ggtgagttcgaggctggtatctccaagaacggccagacccgtgagcacgccctgctggcc
ttcaccctcggtgtgaagcagctcatcgttggtatcaacaagatggacaacaccgagccc
ccttacagccagtcccgtttcgaggagatcaaaaaagaagttagcacctacatcaagaaa
atcggctacaaccccggtgctgttgcctttgtccccatctctgggtggcacggagacaac
atgatcgaaactactgaaaagatgagctggtacaaaggatggaaggttgagcgcaaggag
ggtaatggcagtggaaccacactgctggaagctctggactccatcctgccaccttcccgc
cccacagaaaaggctctccgtctgcccctgcaggacgtctacaaaatcggaggtattgga
actgtacccgtcggtcgtgttgagactgggatcctgaagcctggtatgctcgtcaccttc
gctccctccaacctgaccactgaggtgaagactgtggagatgcaccacgaggctttgccc
gaggctctccccggtgacaacgttggcttcaacatcaagaacgtgtctgttaaggagatc
cgtcgtggatacgttgctggagacagcaagaacgacccacctctggaagctgaaaacttc
aaagcccaggtcatcgtcctgaaccaccccggacagatctcaaatggttacaccccagtg
ctggattgccacacagctcacatcgcctgcaaattcaaggaacttgtggagaagatcgac
cgtcggtctggtaagaagctcgaagctgaccccaagtttatcaagtctggagattctgcc
attgtcctcatgaagccttcaaaacccttggtcgttgaggccttctccgagtatgcccca
ctgggtcgctttgctgtgcgagacatgaggcagactgtggccgttggcgtcgtcaagtct
gtggagaagaagcacctcacatctgcaaaggtcaccaagtctgcacagaaggtacagaag
aaatga
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